RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 CUTCQ9NTM9 273 aa9.78□□□□□ -0.84
HDAC3-203ENST00000467533 RIC8BQ9NVN3 520 aa9.78□□□□□ -0.84
HDAC3-203ENST00000467533 EURLQ9NYK6 297 aa9.78□□□□□ -0.84
HDAC3-203ENST00000467533 TEKT2Q9UIF3 430 aa9.78□□□□□ -0.84
HDAC3-203ENST00000467533 ICKQ9UPZ9 632 aa9.78□□□□□ -0.84
HDAC3-203ENST00000467533 RNF6Q9Y252 685 aa9.78□□□□□ -0.84
HDAC3-203ENST00000467533 MAU2Q9Y6X3 613 aa9.78□□□□□ -0.84
HDAC3-203ENST00000467533 AKAP6Q13023 2319 aa9.78□□□□□ -0.84
HDAC3-203ENST00000467533 GLYATL1P3A0A0U1RQE8 302 aa9.77□□□□□ -0.85
HDAC3-203ENST00000467533 TMEM191CA6NGB0 347 aa9.77□□□□□ -0.85
HDAC3-203ENST00000467533 TMCO5BA8MYB1 307 aa9.77□□□□□ -0.85
HDAC3-203ENST00000467533 ONECUT2O95948 504 aa9.77□□□□□ -0.85
HDAC3-203ENST00000467533 TPOP07202 933 aa9.77□□□□□ -0.85
HDAC3-203ENST00000467533 RARAP10276 462 aa9.77□□□□□ -0.85
HDAC3-203ENST00000467533 TCF4P15884 667 aa9.77□□□□□ -0.85
HDAC3-203ENST00000467533 CXCR2P25025 360 aa9.77□□□□□ -0.85
HDAC3-203ENST00000467533 EEF1DP29692 281 aaKnown RBP9.77□□□□□ -0.85
HDAC3-203ENST00000467533 SHMT2P34897 504 aa9.77□□□□□ -0.85
HDAC3-203ENST00000467533 GCGRP47871 477 aa9.77□□□□□ -0.85
HDAC3-203ENST00000467533 AP2B1P63010 937 aa9.77□□□□□ -0.85
HDAC3-203ENST00000467533 OCA2Q04671 838 aa9.77□□□□□ -0.85
HDAC3-203ENST00000467533 MMRN1Q13201 1228 aa9.77□□□□□ -0.85
HDAC3-203ENST00000467533 DEFB113Q30KQ7 82 aa9.77□□□□□ -0.85
HDAC3-203ENST00000467533 ATP13A4Q4VNC1 1196 aa9.77□□□□□ -0.85
HDAC3-203ENST00000467533 BOLA3Q53S33 107 aa9.77□□□□□ -0.85
HDAC3-203ENST00000467533 ZDHHC20Q5W0Z9 365 aa9.77□□□□□ -0.85
HDAC3-203ENST00000467533 ATG9BQ674R7 924 aa9.77□□□□□ -0.85
HDAC3-203ENST00000467533 NCBP2-AS2Q69YL0 99 aa9.77□□□□□ -0.85
HDAC3-203ENST00000467533 CCDC70Q6NSX1 233 aa9.77□□□□□ -0.85
HDAC3-203ENST00000467533 PAMR1Q6UXH9 720 aa9.77□□□□□ -0.85
HDAC3-203ENST00000467533 CD163Q86VB7 1156 aa9.77□□□□□ -0.85
HDAC3-203ENST00000467533 MARVELD2Q8N4S9 558 aa9.77□□□□□ -0.85
HDAC3-203ENST00000467533 TTC29Q8NA56 475 aaPredicted RBP9.77□□□□□ -0.85
HDAC3-203ENST00000467533 FAM98AQ8NCA5 519 aaKnown RBP9.77□□□□□ -0.85
HDAC3-203ENST00000467533 CCNYQ8ND76 341 aa9.77□□□□□ -0.85
HDAC3-203ENST00000467533 STT3BQ8TCJ2 826 aa9.77□□□□□ -0.85
HDAC3-203ENST00000467533 FATE1Q969F0 183 aa9.77□□□□□ -0.85
HDAC3-203ENST00000467533 FRMD6Q96NE9 622 aa9.77□□□□□ -0.85
HDAC3-203ENST00000467533 SRPK1Q96SB4 655 aaKnown RBP9.77□□□□□ -0.85
HDAC3-203ENST00000467533 TRIM51Q9BSJ1 452 aa9.77□□□□□ -0.85
HDAC3-203ENST00000467533 HES7Q9BYE0 225 aa9.77□□□□□ -0.85
HDAC3-203ENST00000467533 MVB12BQ9H7P6 319 aa9.77□□□□□ -0.85
HDAC3-203ENST00000467533 TAS2R14Q9NYV8 317 aa9.77□□□□□ -0.85
HDAC3-203ENST00000467533 IGHV1-45A0A0A0MS14 117 aa9.76□□□□□ -0.85
HDAC3-203ENST00000467533 ASPDHA6ND91 283 aa9.76□□□□□ -0.85
HDAC3-203ENST00000467533 RNF212BA8MTL3 300 aa9.76□□□□□ -0.85
HDAC3-203ENST00000467533 ISM1B1AKI9 464 aa9.76□□□□□ -0.85
HDAC3-203ENST00000467533 KCNK1O00180 336 aa9.76□□□□□ -0.85
HDAC3-203ENST00000467533 EPHB6O15197 1021 aa9.76□□□□□ -0.85
HDAC3-203ENST00000467533 KLK8O60259 260 aa9.76□□□□□ -0.85
HDAC3-203ENST00000467533 RAF1P04049 648 aa9.76□□□□□ -0.85
HDAC3-203ENST00000467533 CHRM5P08912 532 aaPredicted RBP9.76□□□□□ -0.85
HDAC3-203ENST00000467533 ZGLP1P0C6A0 271 aa9.76□□□□□ -0.85
HDAC3-203ENST00000467533 MCM3P25205 808 aa9.76□□□□□ -0.85
HDAC3-203ENST00000467533 PCK1P35558 622 aa9.76□□□□□ -0.85
HDAC3-203ENST00000467533 HMGCLP35914 325 aa9.76□□□□□ -0.85
HDAC3-203ENST00000467533 BCL7AQ4VC05 210 aa9.76□□□□□ -0.85
HDAC3-203ENST00000467533 YOD1Q5VVQ6 348 aaPredicted RBP9.76□□□□□ -0.85
HDAC3-203ENST00000467533 TMEM211Q6ICI0 200 aa9.76□□□□□ -0.85
HDAC3-203ENST00000467533 CCDC71Q8IV32 467 aaPredicted RBP9.76□□□□□ -0.85
HDAC3-203ENST00000467533 SIAH3Q8IW03 269 aa9.76□□□□□ -0.85
HDAC3-203ENST00000467533 CHERPQ8IWX8 916 aaKnown RBP9.76□□□□□ -0.85
HDAC3-203ENST00000467533 MYRIPQ8NFW9 859 aa9.76□□□□□ -0.85
HDAC3-203ENST00000467533 RND1Q92730 232 aa9.76□□□□□ -0.85
HDAC3-203ENST00000467533 HDAC10Q969S8 669 aa9.76□□□□□ -0.85
HDAC3-203ENST00000467533 TSGA13Q96PP4 275 aa9.76□□□□□ -0.85
HDAC3-203ENST00000467533 CEP41Q9BYV8 373 aa9.76□□□□□ -0.85
HDAC3-203ENST00000467533 SMOXQ9NWM0 555 aa9.76□□□□□ -0.85
HDAC3-203ENST00000467533 SPHK1Q9NYA1 384 aa9.76□□□□□ -0.85
HDAC3-203ENST00000467533 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.76□□□□□ -0.85
HDAC3-203ENST00000467533 IL1RAPL1Q9NZN1 696 aa9.76□□□□□ -0.85
HDAC3-203ENST00000467533 IL17CQ9P0M4 197 aa9.76□□□□□ -0.85
HDAC3-203ENST00000467533 ZNF282Q9UDV7 671 aaPredicted RBP9.76□□□□□ -0.85
HDAC3-203ENST00000467533 ADAM21Q9UKJ8 722 aa9.76□□□□□ -0.85
HDAC3-203ENST00000467533 L3MBTL1Q9Y468 752 aa9.76□□□□□ -0.85
HDAC3-203ENST00000467533 ASB1Q9Y576 335 aa9.76□□□□□ -0.85
HDAC3-203ENST00000467533 MXRA5Q9NR99 2828 aa9.76□□□□□ -0.85
HDAC3-203ENST00000467533 ATRQ13535 2644 aa9.75□□□□□ -0.85
HDAC3-203ENST00000467533 IDSB3KWA1 339 aa9.75□□□□□ -0.85
HDAC3-203ENST00000467533 INAFM1C9JVW0 142 aa9.75□□□□□ -0.85
HDAC3-203ENST00000467533 RASGRF2O14827 1237 aa9.75□□□□□ -0.85
HDAC3-203ENST00000467533 NDST3O95803 873 aa9.75□□□□□ -0.85
HDAC3-203ENST00000467533 CD46P15529 392 aa9.75□□□□□ -0.85
HDAC3-203ENST00000467533 ZNF24P17028 368 aa9.75□□□□□ -0.85
HDAC3-203ENST00000467533 MAGP20916 626 aa9.75□□□□□ -0.85
HDAC3-203ENST00000467533 ZBTB17Q13105 803 aa9.75□□□□□ -0.85
HDAC3-203ENST00000467533 BOP1Q14137 746 aaKnown RBP9.75□□□□□ -0.85
HDAC3-203ENST00000467533 KEAP1Q14145 624 aa9.75□□□□□ -0.85
HDAC3-203ENST00000467533 GRM7Q14831 915 aa9.75□□□□□ -0.85
HDAC3-203ENST00000467533 PAFAH1B3Q15102 231 aaKnown RBP9.75□□□□□ -0.85
HDAC3-203ENST00000467533 FAM182AQ5T1J6 154 aa9.75□□□□□ -0.85
HDAC3-203ENST00000467533 PPP1R2P3Q6NXS1 205 aa9.75□□□□□ -0.85
HDAC3-203ENST00000467533 KDELC1Q6UW63 502 aa9.75□□□□□ -0.85
HDAC3-203ENST00000467533 UNC5AQ6ZN44 842 aa9.75□□□□□ -0.85
HDAC3-203ENST00000467533 FGD2Q7Z6J4 655 aa9.75□□□□□ -0.85
HDAC3-203ENST00000467533 CDC20BQ86Y33 519 aa9.75□□□□□ -0.85
HDAC3-203ENST00000467533 MCATQ8IVS2 390 aaKnown RBP9.75□□□□□ -0.85
HDAC3-203ENST00000467533 BEST3Q8N1M1 668 aa9.75□□□□□ -0.85
HDAC3-203ENST00000467533 DTWD1Q8N5C7 304 aa9.75□□□□□ -0.85
HDAC3-203ENST00000467533 TMEM178AQ8NBL3 297 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms