RNA–Protein interactions for RNA: ENST00000466780.5

PDZRN3-205, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-205ENST00000466780 KRT20P35900 424 aa12.69□□□□□ -0.38
PDZRN3-205ENST00000466780 PTGER3P43115 390 aa12.69□□□□□ -0.38
PDZRN3-205ENST00000466780 KCNQ1P51787 676 aa12.69□□□□□ -0.38
PDZRN3-205ENST00000466780 SLC14A1Q13336 389 aa12.69□□□□□ -0.38
PDZRN3-205ENST00000466780 GTF2H3Q13889 308 aa12.69□□□□□ -0.38
PDZRN3-205ENST00000466780 MAD2L1BPQ15013 274 aaPredicted RBP12.69□□□□□ -0.38
PDZRN3-205ENST00000466780 TAF1CQ15572 869 aaPredicted RBP12.69□□□□□ -0.38
PDZRN3-205ENST00000466780 CARTPTQ16568 116 aa12.69□□□□□ -0.38
PDZRN3-205ENST00000466780 USP39Q53GS9 565 aaKnown RBP12.69□□□□□ -0.38
PDZRN3-205ENST00000466780 DACH2Q96NX9 599 aa12.69□□□□□ -0.38
PDZRN3-205ENST00000466780 SIGLEC11Q96RL6 698 aa12.69□□□□□ -0.38
PDZRN3-205ENST00000466780 CTRCQ99895 268 aa12.69□□□□□ -0.38
PDZRN3-205ENST00000466780 SIAEQ9HAT2 523 aa12.69□□□□□ -0.38
PDZRN3-205ENST00000466780 LRTM1Q9HBL6 345 aa12.69□□□□□ -0.38
PDZRN3-205ENST00000466780 ABCB10Q9NRK6 738 aa12.69□□□□□ -0.38
PDZRN3-205ENST00000466780 ERVW-1Q9UQF0 538 aa12.69□□□□□ -0.38
PDZRN3-205ENST00000466780 ERVK-11Q9UQG0 969 aa12.69□□□□□ -0.38
PDZRN3-205ENST00000466780 GMPPBQ9Y5P6 360 aa12.69□□□□□ -0.38
PDZRN3-205ENST00000466780 HSPE1-MOB4S4R3N1 261 aa12.69□□□□□ -0.38
PDZRN3-205ENST00000466780 PLXNA4Q9HCM2 1894 aa12.69□□□□□ -0.38
PDZRN3-205ENST00000466780 OR2A25A4D2G3 310 aa12.68□□□□□ -0.38
PDZRN3-205ENST00000466780 FAM20BO75063 409 aa12.68□□□□□ -0.38
PDZRN3-205ENST00000466780 UPK1BO75841 260 aa12.68□□□□□ -0.38
PDZRN3-205ENST00000466780 DIRAS1O95057 198 aa12.68□□□□□ -0.38
PDZRN3-205ENST00000466780 F11P03951 625 aa12.68□□□□□ -0.38
PDZRN3-205ENST00000466780 S100BP04271 92 aaPredicted RBP12.68□□□□□ -0.38
PDZRN3-205ENST00000466780 NTRK1P04629 796 aa12.68□□□□□ -0.38
PDZRN3-205ENST00000466780 BCKDHAP12694 445 aa12.68□□□□□ -0.38
PDZRN3-205ENST00000466780 CD36P16671 472 aa12.68□□□□□ -0.38
PDZRN3-205ENST00000466780 ZNF24P17028 368 aa12.68□□□□□ -0.38
PDZRN3-205ENST00000466780 CDKN2CP42773 168 aa12.68□□□□□ -0.38
PDZRN3-205ENST00000466780 MAD2L1Q13257 205 aaPredicted RBP12.68□□□□□ -0.38
PDZRN3-205ENST00000466780 LRIF1Q5T3J3 769 aa12.68□□□□□ -0.38
PDZRN3-205ENST00000466780 CACHD1Q5VU97 1274 aa12.68□□□□□ -0.38
PDZRN3-205ENST00000466780 NEK10Q6ZWH5 1172 aa12.68□□□□□ -0.38
PDZRN3-205ENST00000466780 TRIM46Q7Z4K8 759 aa12.68□□□□□ -0.38
PDZRN3-205ENST00000466780 ANKRD46Q86W74 232 aa12.68□□□□□ -0.38
PDZRN3-205ENST00000466780 LACC1Q8IV20 430 aa12.68□□□□□ -0.38
PDZRN3-205ENST00000466780 CARNMT1Q8N4J0 409 aa12.68□□□□□ -0.38
PDZRN3-205ENST00000466780 ATAD1Q8NBU5 361 aa12.68□□□□□ -0.38
PDZRN3-205ENST00000466780 MCFD2Q8NI22 146 aa12.68□□□□□ -0.38
PDZRN3-205ENST00000466780 HTRA1Q92743 480 aa12.68□□□□□ -0.38
PDZRN3-205ENST00000466780 ZNF490Q9ULM2 529 aaPredicted RBP12.68□□□□□ -0.38
PDZRN3-205ENST00000466780 NDRG4Q9ULP0 352 aaKnown RBP12.68□□□□□ -0.38
PDZRN3-205ENST00000466780 AP3M1Q9Y2T2 418 aa12.68□□□□□ -0.38
PDZRN3-205ENST00000466780 ARIH1Q9Y4X5 557 aaPredicted RBP12.68□□□□□ -0.38
PDZRN3-205ENST00000466780 RAI2Q9Y5P3 530 aa12.68□□□□□ -0.38
PDZRN3-205ENST00000466780 ANKRD66B4E2M5 251 aa12.68□□□□□ -0.38
PDZRN3-205ENST00000466780 SLC28A1O00337 649 aa12.68□□□□□ -0.38
PDZRN3-205ENST00000466780 RAD51BO15315 384 aa12.68□□□□□ -0.38
PDZRN3-205ENST00000466780 ERN1O75460 977 aaKnown RBP12.68□□□□□ -0.38
PDZRN3-205ENST00000466780 GLUD1P00367 558 aa12.68□□□□□ -0.38
PDZRN3-205ENST00000466780 ITGB6P18564 788 aa12.68□□□□□ -0.38
PDZRN3-205ENST00000466780 TAF10Q12962 218 aa12.68□□□□□ -0.38
PDZRN3-205ENST00000466780 FADDQ13158 208 aa12.68□□□□□ -0.38
PDZRN3-205ENST00000466780 DSC3Q14574 896 aa12.68□□□□□ -0.38
PDZRN3-205ENST00000466780 SMU1Q2TAY7 513 aa12.68□□□□□ -0.38
PDZRN3-205ENST00000466780 OR2T5Q6IEZ7 315 aa12.68□□□□□ -0.38
PDZRN3-205ENST00000466780 PLD3Q8IV08 490 aa12.68□□□□□ -0.38
PDZRN3-205ENST00000466780 SVOPQ8N4V2 548 aa12.68□□□□□ -0.38
PDZRN3-205ENST00000466780 KIAA1958Q8N8K9 716 aa12.68□□□□□ -0.38
PDZRN3-205ENST00000466780 TTC29Q8NA56 475 aaPredicted RBP12.68□□□□□ -0.38
PDZRN3-205ENST00000466780 OR2T29Q8NH02 315 aa12.68□□□□□ -0.38
PDZRN3-205ENST00000466780 LKAAEAR1Q8TD35 194 aa12.68□□□□□ -0.38
PDZRN3-205ENST00000466780 TBC1D20Q96BZ9 403 aa12.68□□□□□ -0.38
PDZRN3-205ENST00000466780 ZHX1-C8orf76Q96EF9 292 aa12.68□□□□□ -0.38
PDZRN3-205ENST00000466780 UROC1Q96N76 676 aa12.68□□□□□ -0.38
PDZRN3-205ENST00000466780 MAGEH1Q9H213 219 aa12.68□□□□□ -0.38
PDZRN3-205ENST00000466780 KCNH6Q9H252 994 aa12.68□□□□□ -0.38
PDZRN3-205ENST00000466780 CCSER2Q9H7U1 834 aa12.68□□□□□ -0.38
PDZRN3-205ENST00000466780 CPNE5Q9HCH3 593 aa12.68□□□□□ -0.38
PDZRN3-205ENST00000466780 ASIC5Q9NY37 505 aa12.68□□□□□ -0.38
PDZRN3-205ENST00000466780 OPTCQ9UBM4 332 aa12.68□□□□□ -0.38
PDZRN3-205ENST00000466780 DLGAP4Q9Y2H0 992 aa12.68□□□□□ -0.38
PDZRN3-205ENST00000466780 A0A096LPI6 279 aa12.68□□□□□ -0.38
PDZRN3-205ENST00000466780 EFCAB9A8MZ26 197 aa12.68□□□□□ -0.38
PDZRN3-205ENST00000466780 MYO1GB0I1T2 1018 aa12.68□□□□□ -0.38
PDZRN3-205ENST00000466780 MANBAO00462 879 aa12.68□□□□□ -0.38
PDZRN3-205ENST00000466780 ULK1O75385 1050 aa12.68□□□□□ -0.38
PDZRN3-205ENST00000466780 WBP4O75554 376 aaKnown RBP12.68□□□□□ -0.38
PDZRN3-205ENST00000466780 OAZ2O95190 189 aa12.68□□□□□ -0.38
PDZRN3-205ENST00000466780 ZNF682O95780 498 aa12.68□□□□□ -0.38
PDZRN3-205ENST00000466780 SERPINB1P30740 379 aa12.68□□□□□ -0.38
PDZRN3-205ENST00000466780 CA5AP35218 305 aa12.68□□□□□ -0.38
PDZRN3-205ENST00000466780 HNRNPFP52597 415 aaKnown RBP12.68□□□□□ -0.38
PDZRN3-205ENST00000466780 MVKQ03426 396 aa12.68□□□□□ -0.38
PDZRN3-205ENST00000466780 SF3B4Q15427 424 aaKnown RBP eCLIP12.68□□□□□ -0.38
PDZRN3-205ENST00000466780 ATAD3BQ5T9A4 648 aa12.68□□□□□ -0.38
PDZRN3-205ENST00000466780 ZNF280BQ86YH2 543 aa12.68□□□□□ -0.38
PDZRN3-205ENST00000466780 SLC22A15Q8IZD6 547 aa12.68□□□□□ -0.38
PDZRN3-205ENST00000466780 CHCHD4Q8N4Q1 142 aa12.68□□□□□ -0.38
PDZRN3-205ENST00000466780 EID2BQ96D98 161 aa12.68□□□□□ -0.38
PDZRN3-205ENST00000466780 FUBP3Q96I24 572 aaKnown RBP eCLIP12.68□□□□□ -0.38
PDZRN3-205ENST00000466780 ADAM2Q99965 735 aa12.68□□□□□ -0.38
PDZRN3-205ENST00000466780 DCSTAMPQ9H295 470 aa12.68□□□□□ -0.38
PDZRN3-205ENST00000466780 SP140LQ9H930 580 aa12.68□□□□□ -0.38
PDZRN3-205ENST00000466780 PRDM8Q9NQV8 689 aa12.68□□□□□ -0.38
PDZRN3-205ENST00000466780 RASSF1Q9NS23 344 aa12.68□□□□□ -0.38
PDZRN3-205ENST00000466780 AGO1Q9UL18 857 aaKnown RBP12.68□□□□□ -0.38
PDZRN3-205ENST00000466780 MAN2B2Q9Y2E5 1009 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms