RNA–Protein interactions for RNA: ENST00000466222.6

CAPN3-209, Transcript of calpain 3, humanhuman

TSL 2

Gene CAPN3, Length 1,934 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-209ENST00000466222 LAYNQ6UX15 382 aa18.14■□□□□ 0.49
CAPN3-209ENST00000466222 CHSY3Q70JA7 882 aa18.14■□□□□ 0.49
CAPN3-209ENST00000466222 GPSM1Q86YR5 675 aa18.14■□□□□ 0.49
CAPN3-209ENST00000466222 MARVELD2Q8N4S9 558 aa18.14■□□□□ 0.49
CAPN3-209ENST00000466222 OR13H1Q8NG92 308 aa18.14■□□□□ 0.49
CAPN3-209ENST00000466222 SLC17A4Q9Y2C5 497 aa18.14■□□□□ 0.49
CAPN3-209ENST00000466222 ASB1Q9Y576 335 aa18.14■□□□□ 0.49
CAPN3-209ENST00000466222 PLXNB3Q9ULL4 1909 aa18.14■□□□□ 0.49
CAPN3-209ENST00000466222 CACNB4O00305 520 aaPredicted RBP18.13■□□□□ 0.49
CAPN3-209ENST00000466222 QSOX1O00391 747 aa18.13■□□□□ 0.49
CAPN3-209ENST00000466222 AXIN1O15169 862 aa18.13■□□□□ 0.49
CAPN3-209ENST00000466222 IPO13O94829 963 aaKnown RBP18.13■□□□□ 0.49
CAPN3-209ENST00000466222 TSPAN8P19075 237 aa18.13■□□□□ 0.49
CAPN3-209ENST00000466222 AKT2P31751 481 aa18.13■□□□□ 0.49
CAPN3-209ENST00000466222 CCR5P51681 352 aa18.13■□□□□ 0.49
CAPN3-209ENST00000466222 CHN2P52757 468 aa18.13■□□□□ 0.49
CAPN3-209ENST00000466222 STX5Q13190 355 aa18.13■□□□□ 0.49
CAPN3-209ENST00000466222 PDK3Q15120 406 aa18.13■□□□□ 0.49
CAPN3-209ENST00000466222 PDCD2Q16342 344 aaPredicted RBP18.13■□□□□ 0.49
CAPN3-209ENST00000466222 LRRC36Q1X8D7 754 aa18.13■□□□□ 0.49
CAPN3-209ENST00000466222 ENPP7Q6UWV6 458 aa18.13■□□□□ 0.49
CAPN3-209ENST00000466222 Q6ZSR6 202 aa18.13■□□□□ 0.49
CAPN3-209ENST00000466222 LRRTM4Q86VH4 590 aa18.13■□□□□ 0.49
CAPN3-209ENST00000466222 PTGR2Q8N8N7 351 aaPredicted RBP18.13■□□□□ 0.49
CAPN3-209ENST00000466222 TSACCQ96A04 125 aaPredicted RBP18.13■□□□□ 0.49
CAPN3-209ENST00000466222 TMEM159Q96B96 161 aa18.13■□□□□ 0.49
CAPN3-209ENST00000466222 PDXPQ96GD0 296 aa18.13■□□□□ 0.49
CAPN3-209ENST00000466222 LINC00615Q96LM1 132 aaPredicted RBP18.13■□□□□ 0.49
CAPN3-209ENST00000466222 TRMOQ9BU70 441 aa18.13■□□□□ 0.49
CAPN3-209ENST00000466222 KLHL42Q9P2K6 505 aa18.13■□□□□ 0.49
CAPN3-209ENST00000466222 TRPM6Q9BX84 2022 aa18.13■□□□□ 0.49
CAPN3-209ENST00000466222 TRIM38O00635 465 aa18.13■□□□□ 0.49
CAPN3-209ENST00000466222 MAP3K13O43283 966 aa18.13■□□□□ 0.49
CAPN3-209ENST00000466222 ENO3P13929 434 aaPredicted RBP18.13■□□□□ 0.49
CAPN3-209ENST00000466222 GFAPP14136 432 aa18.13■□□□□ 0.49
CAPN3-209ENST00000466222 CCR3P51677 355 aa18.13■□□□□ 0.49
CAPN3-209ENST00000466222 RPL6Q02878 288 aaKnown RBP18.13■□□□□ 0.49
CAPN3-209ENST00000466222 SQLEQ14534 574 aa18.13■□□□□ 0.49
CAPN3-209ENST00000466222 RD3Q7Z3Z2 195 aa18.13■□□□□ 0.49
CAPN3-209ENST00000466222 SLC22A18ASQ8N1D0 253 aa18.13■□□□□ 0.49
CAPN3-209ENST00000466222 EFCAB3Q8N7B9 438 aa18.13■□□□□ 0.49
CAPN3-209ENST00000466222 DENND6BQ8NEG7 585 aa18.13■□□□□ 0.49
CAPN3-209ENST00000466222 OR2L2Q8NH16 312 aa18.13■□□□□ 0.49
CAPN3-209ENST00000466222 ASB11Q8WXH4 323 aa18.13■□□□□ 0.49
CAPN3-209ENST00000466222 OR1E3Q8WZA6 343 aa18.13■□□□□ 0.49
CAPN3-209ENST00000466222 ZNF514Q96K75 400 aaPredicted RBP18.13■□□□□ 0.49
CAPN3-209ENST00000466222 MRPL1Q9BYD6 325 aaKnown RBP18.13■□□□□ 0.49
CAPN3-209ENST00000466222 MEAF6Q9HAF1 191 aa18.13■□□□□ 0.49
CAPN3-209ENST00000466222 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.12■□□□□ 0.49
CAPN3-209ENST00000466222 A0A1W2PPC4 97 aa18.12■□□□□ 0.49
CAPN3-209ENST00000466222 MGAT4DA6NG13 374 aa18.12■□□□□ 0.49
CAPN3-209ENST00000466222 PRAMEF26H0Y7S4 382 aa18.12■□□□□ 0.49
CAPN3-209ENST00000466222 NDUFS2O75306 463 aa18.12■□□□□ 0.49
CAPN3-209ENST00000466222 CAPNS1P04632 268 aa18.12■□□□□ 0.49
CAPN3-209ENST00000466222 CBSLP0DN79 551 aa18.12■□□□□ 0.49
CAPN3-209ENST00000466222 ACP5P13686 325 aa18.12■□□□□ 0.49
CAPN3-209ENST00000466222 XRCC1P18887 633 aaPredicted RBP18.12■□□□□ 0.49
CAPN3-209ENST00000466222 RPL10P27635 214 aaKnown RBP18.12■□□□□ 0.49
CAPN3-209ENST00000466222 CBSP35520 551 aa18.12■□□□□ 0.49
CAPN3-209ENST00000466222 GNPDA1P46926 289 aa18.12■□□□□ 0.49
CAPN3-209ENST00000466222 INHBCP55103 352 aa18.12■□□□□ 0.49
CAPN3-209ENST00000466222 FOLH1Q04609 750 aa18.12■□□□□ 0.49
CAPN3-209ENST00000466222 CEACAM7Q14002 265 aa18.12■□□□□ 0.49
CAPN3-209ENST00000466222 AMZ2Q86W34 360 aa18.12■□□□□ 0.49
CAPN3-209ENST00000466222 TMEFF1Q8IYR6 380 aa18.12■□□□□ 0.49
CAPN3-209ENST00000466222 NCSTNQ92542 709 aa18.12■□□□□ 0.49
CAPN3-209ENST00000466222 SLC6A18Q96N87 628 aa18.12■□□□□ 0.49
CAPN3-209ENST00000466222 EPB41L1Q9H4G0 881 aa18.12■□□□□ 0.49
CAPN3-209ENST00000466222 CD274Q9NZQ7 290 aa18.12■□□□□ 0.49
CAPN3-209ENST00000466222 EIF2B4Q9UI10 523 aaKnown RBP18.12■□□□□ 0.49
CAPN3-209ENST00000466222 GPSM3Q9Y4H4 160 aa18.12■□□□□ 0.49
CAPN3-209ENST00000466222 PPP6CO00743 305 aa18.11■□□□□ 0.49
CAPN3-209ENST00000466222 KPNA5O15131 536 aa18.11■□□□□ 0.49
CAPN3-209ENST00000466222 PABPC4LP0CB38 370 aaKnown RBP18.11■□□□□ 0.49
CAPN3-209ENST00000466222 SRSF5Q13243 272 aaKnown RBP18.11■□□□□ 0.49
CAPN3-209ENST00000466222 CCSMST1Q4G0I0 132 aa18.11■□□□□ 0.49
CAPN3-209ENST00000466222 OR56A4Q8NGH8 313 aa18.11■□□□□ 0.49
CAPN3-209ENST00000466222 PPP1R36Q96LQ0 422 aa18.11■□□□□ 0.49
CAPN3-209ENST00000466222 NSUN5Q96P11 429 aaKnown RBP18.11■□□□□ 0.49
CAPN3-209ENST00000466222 FAM126AQ9BYI3 521 aaPredicted RBP18.11■□□□□ 0.49
CAPN3-209ENST00000466222 TRIM4Q9C037 500 aa18.11■□□□□ 0.49
CAPN3-209ENST00000466222 SUCOQ9UBS9 1254 aaKnown RBP18.11■□□□□ 0.49
CAPN3-209ENST00000466222 RIMS3Q9UJD0 308 aa18.11■□□□□ 0.49
CAPN3-209ENST00000466222 CNOT11Q9UKZ1 510 aaKnown RBP18.11■□□□□ 0.49
CAPN3-209ENST00000466222 G3BP2Q9UN86 482 aaKnown RBP18.11■□□□□ 0.49
CAPN3-209ENST00000466222 PDE10AQ9Y233 779 aa18.11■□□□□ 0.49
CAPN3-209ENST00000466222 KCNK6Q9Y257 313 aa18.11■□□□□ 0.49
CAPN3-209ENST00000466222 TTC28Q96AY4 2481 aa18.11■□□□□ 0.49
CAPN3-209ENST00000466222 DOCK9Q9BZ29 2069 aa18.11■□□□□ 0.49
CAPN3-209ENST00000466222 PRSS51A0A1B0GVH4 220 aa18.11■□□□□ 0.49
CAPN3-209ENST00000466222 SMIM31A0A1B0GVY4 71 aa18.11■□□□□ 0.49
CAPN3-209ENST00000466222 TMEM221A6NGB7 291 aa18.11■□□□□ 0.49
CAPN3-209ENST00000466222 METTL12A8MUP2 240 aa18.11■□□□□ 0.49
CAPN3-209ENST00000466222 H3BM21 787 aa18.11■□□□□ 0.49
CAPN3-209ENST00000466222 M0R296 226 aa18.11■□□□□ 0.49
CAPN3-209ENST00000466222 FNTBP49356 437 aa18.11■□□□□ 0.49
CAPN3-209ENST00000466222 ATP4BP51164 291 aa18.11■□□□□ 0.49
CAPN3-209ENST00000466222 CDH13P55290 713 aa18.11■□□□□ 0.49
CAPN3-209ENST00000466222 NFATC4Q14934 902 aa18.11■□□□□ 0.49
CAPN3-209ENST00000466222 PYCR3Q53H96 274 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms