RNA–Protein interactions for RNA: ENST00000465721.1

CNOT4-208, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 4

Gene CNOT4, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-208ENST00000465721 C10orf88Q9H8K7 445 aa11.3□□□□□ -0.6
CNOT4-208ENST00000465721 MRM3Q9HC36 420 aaKnown RBP11.3□□□□□ -0.6
CNOT4-208ENST00000465721 SPTLC3Q9NUV7 552 aa11.3□□□□□ -0.6
CNOT4-208ENST00000465721 IRAK4Q9NWZ3 460 aa11.3□□□□□ -0.6
CNOT4-208ENST00000465721 EURLQ9NYK6 297 aa11.3□□□□□ -0.6
CNOT4-208ENST00000465721 OR6C2Q9NZP2 312 aa11.3□□□□□ -0.6
CNOT4-208ENST00000465721 PLAGL1Q9UM63 463 aa11.3□□□□□ -0.6
CNOT4-208ENST00000465721 ASF1AQ9Y294 204 aa11.3□□□□□ -0.6
CNOT4-208ENST00000465721 NIPBLQ6KC79 2804 aaeCLIP11.29□□□□□ -0.6
CNOT4-208ENST00000465721 GOLGA6L22H0YM25 854 aa11.29□□□□□ -0.6
CNOT4-208ENST00000465721 H7C0S8 307 aa11.29□□□□□ -0.6
CNOT4-208ENST00000465721 LIN7AO14910 233 aaPredicted RBP11.29□□□□□ -0.6
CNOT4-208ENST00000465721 DSCR3O14972 297 aa11.29□□□□□ -0.6
CNOT4-208ENST00000465721 SPOPO43791 374 aa11.29□□□□□ -0.6
CNOT4-208ENST00000465721 JRKO75564 520 aa11.29□□□□□ -0.6
CNOT4-208ENST00000465721 KLHL18O94889 574 aa11.29□□□□□ -0.6
CNOT4-208ENST00000465721 ALBP02768 609 aa11.29□□□□□ -0.6
CNOT4-208ENST00000465721 MAGP20916 626 aa11.29□□□□□ -0.6
CNOT4-208ENST00000465721 PKLRP30613 574 aa11.29□□□□□ -0.6
CNOT4-208ENST00000465721 PTGER4P35408 488 aa11.29□□□□□ -0.6
CNOT4-208ENST00000465721 MFAP5Q13361 173 aa11.29□□□□□ -0.6
CNOT4-208ENST00000465721 KIR2DS3Q14952 304 aa11.29□□□□□ -0.6
CNOT4-208ENST00000465721 TCEAL1Q15170 157 aa11.29□□□□□ -0.6
CNOT4-208ENST00000465721 DBN1Q16643 649 aa11.29□□□□□ -0.6
CNOT4-208ENST00000465721 ZXDCQ2QGD7 858 aaPredicted RBP11.29□□□□□ -0.6
CNOT4-208ENST00000465721 IRAK1BP1Q5VVH5 260 aa11.29□□□□□ -0.6
CNOT4-208ENST00000465721 ITPRIPL1Q6GPH6 555 aa11.29□□□□□ -0.6
CNOT4-208ENST00000465721 ZNF449Q6P9G9 518 aa11.29□□□□□ -0.6
CNOT4-208ENST00000465721 ISLR2Q6UXK2 745 aa11.29□□□□□ -0.6
CNOT4-208ENST00000465721 SHISA6Q6ZSJ9 500 aa11.29□□□□□ -0.6
CNOT4-208ENST00000465721 TTLL10Q6ZVT0 673 aa11.29□□□□□ -0.6
CNOT4-208ENST00000465721 OR5K2Q8NHB8 316 aa11.29□□□□□ -0.6
CNOT4-208ENST00000465721 THOC3Q96J01 351 aaKnown RBP11.29□□□□□ -0.6
CNOT4-208ENST00000465721 LURAP1Q96LR2 239 aa11.29□□□□□ -0.6
CNOT4-208ENST00000465721 TAAR6Q96RI8 345 aa11.29□□□□□ -0.6
CNOT4-208ENST00000465721 GOLPH3Q9H4A6 298 aa11.29□□□□□ -0.6
CNOT4-208ENST00000465721 SOX17Q9H6I2 414 aaPredicted RBP11.29□□□□□ -0.6
CNOT4-208ENST00000465721 ENAMQ9NRM1 1142 aa11.29□□□□□ -0.6
CNOT4-208ENST00000465721 POLG2Q9UHN1 485 aa11.29□□□□□ -0.6
CNOT4-208ENST00000465721 KLHL20Q9Y2M5 609 aa11.29□□□□□ -0.6
CNOT4-208ENST00000465721 TDRKHQ9Y2W6 561 aaKnown RBP11.29□□□□□ -0.6
CNOT4-208ENST00000465721 PRSS21Q9Y6M0 314 aa11.29□□□□□ -0.6
CNOT4-208ENST00000465721 DNHD1Q96M86 4753 aa11.29□□□□□ -0.6
CNOT4-208ENST00000465721 SLC5A10A0PJK1 596 aa11.28□□□□□ -0.6
CNOT4-208ENST00000465721 BHMG1C9JSJ3 638 aaPredicted RBP11.28□□□□□ -0.6
CNOT4-208ENST00000465721 APOC4-APOC2K7ER74 178 aa11.28□□□□□ -0.6
CNOT4-208ENST00000465721 AKR1B10O60218 316 aa11.28□□□□□ -0.6
CNOT4-208ENST00000465721 AP2A1O95782 977 aa11.28□□□□□ -0.6
CNOT4-208ENST00000465721 APOC2P02655 101 aa11.28□□□□□ -0.6
CNOT4-208ENST00000465721 ALAS2P22557 587 aa11.28□□□□□ -0.6
CNOT4-208ENST00000465721 MCM3P25205 808 aa11.28□□□□□ -0.6
CNOT4-208ENST00000465721 SOX11P35716 441 aa11.28□□□□□ -0.6
CNOT4-208ENST00000465721 ARSFP54793 590 aa11.28□□□□□ -0.6
CNOT4-208ENST00000465721 RBBP7Q16576 425 aa11.28□□□□□ -0.6
CNOT4-208ENST00000465721 BNC2Q6ZN30 1099 aaPredicted RBP11.28□□□□□ -0.6
CNOT4-208ENST00000465721 LINC00696Q6ZRV3 163 aa11.28□□□□□ -0.6
CNOT4-208ENST00000465721 BBS12Q6ZW61 710 aa11.28□□□□□ -0.6
CNOT4-208ENST00000465721 KLHDC8BQ8IXV7 354 aa11.28□□□□□ -0.6
CNOT4-208ENST00000465721 KATNAL2Q8IYT4 538 aa11.28□□□□□ -0.6
CNOT4-208ENST00000465721 DTWD1Q8N5C7 304 aa11.28□□□□□ -0.6
CNOT4-208ENST00000465721 LINC01555Q8NAE3 123 aa11.28□□□□□ -0.6
CNOT4-208ENST00000465721 CATSPER1Q8NEC5 780 aa11.28□□□□□ -0.6
CNOT4-208ENST00000465721 NR4A3Q92570 626 aa11.28□□□□□ -0.6
CNOT4-208ENST00000465721 CCDC120Q96HB5 630 aa11.28□□□□□ -0.6
CNOT4-208ENST00000465721 ZNF285Q96NJ3 590 aa11.28□□□□□ -0.6
CNOT4-208ENST00000465721 TBL1YQ9BQ87 522 aa11.28□□□□□ -0.6
CNOT4-208ENST00000465721 MENTQ9BUN1 341 aa11.28□□□□□ -0.6
CNOT4-208ENST00000465721 TRIM8Q9BZR9 551 aa11.28□□□□□ -0.6
CNOT4-208ENST00000465721 RUBCNLQ9H714 662 aa11.28□□□□□ -0.6
CNOT4-208ENST00000465721 ARNT2Q9HBZ2 717 aa11.28□□□□□ -0.6
CNOT4-208ENST00000465721 SEMA3GQ9NS98 782 aa11.28□□□□□ -0.6
CNOT4-208ENST00000465721 CUTCQ9NTM9 273 aa11.28□□□□□ -0.6
CNOT4-208ENST00000465721 IFNKQ9P0W0 207 aa11.28□□□□□ -0.6
CNOT4-208ENST00000465721 NXT1Q9UKK6 140 aaKnown RBP11.28□□□□□ -0.6
CNOT4-208ENST00000465721 INTS1Q8N201 2190 aaKnown RBP11.28□□□□□ -0.6
CNOT4-208ENST00000465721 VSTM2BA6NLU5 285 aa11.27□□□□□ -0.61
CNOT4-208ENST00000465721 ISM1B1AKI9 464 aa11.27□□□□□ -0.61
CNOT4-208ENST00000465721 AP2A2O94973 939 aa11.27□□□□□ -0.61
CNOT4-208ENST00000465721 BRD3Q15059 726 aa11.27□□□□□ -0.61
CNOT4-208ENST00000465721 INAQ16352 499 aa11.27□□□□□ -0.61
CNOT4-208ENST00000465721 ANKRD20A2Q5SQ80 823 aa11.27□□□□□ -0.61
CNOT4-208ENST00000465721 ANKRD20A1Q5TYW2 823 aa11.27□□□□□ -0.61
CNOT4-208ENST00000465721 ANKRD20A3Q5VUR7 823 aa11.27□□□□□ -0.61
CNOT4-208ENST00000465721 CAVIN1Q6NZI2 390 aaKnown RBP11.27□□□□□ -0.61
CNOT4-208ENST00000465721 PACS1Q6VY07 963 aa11.27□□□□□ -0.61
CNOT4-208ENST00000465721 NAPRTQ6XQN6 538 aa11.27□□□□□ -0.61
CNOT4-208ENST00000465721 MCATQ8IVS2 390 aaKnown RBP11.27□□□□□ -0.61
CNOT4-208ENST00000465721 LMNTD1Q8N9Z9 388 aa11.27□□□□□ -0.61
CNOT4-208ENST00000465721 OR1N1Q8NGS0 311 aa11.27□□□□□ -0.61
CNOT4-208ENST00000465721 ELMO1Q92556 727 aa11.27□□□□□ -0.61
CNOT4-208ENST00000465721 LMF1Q96S06 567 aa11.27□□□□□ -0.61
CNOT4-208ENST00000465721 CHP1Q99653 195 aa11.27□□□□□ -0.61
CNOT4-208ENST00000465721 ANP32EQ9BTT0 268 aa11.27□□□□□ -0.61
CNOT4-208ENST00000465721 NLE1Q9NVX2 485 aaPredicted RBP11.27□□□□□ -0.61
CNOT4-208ENST00000465721 AAR2Q9Y312 384 aaKnown RBP11.27□□□□□ -0.61
CNOT4-208ENST00000465721 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.27□□□□□ -0.617e-7■□□□□ 9.6
CNOT4-208ENST00000465721 FITM1A5D6W6 292 aa11.26□□□□□ -0.61
CNOT4-208ENST00000465721 H7C0C1 242 aa11.26□□□□□ -0.61
CNOT4-208ENST00000465721 MED26O95402 600 aa11.26□□□□□ -0.61
CNOT4-208ENST00000465721 HPP00738 406 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms