RNA–Protein interactions for RNA: ENST00000465627.5

UBA3-208, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 1,388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-208ENST00000465627 CRTC3Q6UUV7 619 aa8.59□□□□□ -1.03
UBA3-208ENST00000465627 MBOAT1Q6ZNC8 495 aa8.59□□□□□ -1.03
UBA3-208ENST00000465627 UBE2R2Q712K3 238 aaPredicted RBP8.59□□□□□ -1.03
UBA3-208ENST00000465627 RETREG3Q86VR2 466 aa8.59□□□□□ -1.03
UBA3-208ENST00000465627 AMZ2Q86W34 360 aa8.59□□□□□ -1.03
UBA3-208ENST00000465627 CFAP206Q8IYR0 622 aa8.59□□□□□ -1.03
UBA3-208ENST00000465627 PGBD3Q8N328 593 aa8.59□□□□□ -1.03
UBA3-208ENST00000465627 ZNF781Q8N8C0 355 aa8.59□□□□□ -1.03
UBA3-208ENST00000465627 PIWIL2Q8TC59 973 aaKnown RBP8.59□□□□□ -1.03
UBA3-208ENST00000465627 TMEM159Q96B96 161 aa8.59□□□□□ -1.03
UBA3-208ENST00000465627 NSUN5Q96P11 429 aaKnown RBP8.59□□□□□ -1.03
UBA3-208ENST00000465627 MENTQ9BUN1 341 aa8.59□□□□□ -1.03
UBA3-208ENST00000465627 TWSG1Q9GZX9 223 aa8.59□□□□□ -1.03
UBA3-208ENST00000465627 FAM107BQ9H098 131 aa8.59□□□□□ -1.03
UBA3-208ENST00000465627 NSRP1Q9H0G5 558 aaKnown RBP8.59□□□□□ -1.03
UBA3-208ENST00000465627 MRPL40Q9NQ50 206 aaKnown RBP8.59□□□□□ -1.03
UBA3-208ENST00000465627 ZDHHC2Q9UIJ5 367 aa8.59□□□□□ -1.03
UBA3-208ENST00000465627 RAB23Q9ULC3 237 aa8.59□□□□□ -1.03
UBA3-208ENST00000465627 DNAJC16Q9Y2G8 782 aa8.59□□□□□ -1.03
UBA3-208ENST00000465627 UTP20O75691 2785 aaKnown RBP8.58□□□□□ -1.04
UBA3-208ENST00000465627 URB1O60287 2271 aaKnown RBP8.58□□□□□ -1.04
UBA3-208ENST00000465627 A0A1W2PR77 199 aa8.58□□□□□ -1.04
UBA3-208ENST00000465627 PRSS38A1L453 326 aa8.58□□□□□ -1.04
UBA3-208ENST00000465627 KRT87PA6NCN2 255 aa8.58□□□□□ -1.04
UBA3-208ENST00000465627 A6NCN8 305 aa8.58□□□□□ -1.04
UBA3-208ENST00000465627 MYO1CO00159 1063 aa8.58□□□□□ -1.04
UBA3-208ENST00000465627 CACNB4O00305 520 aaPredicted RBP8.58□□□□□ -1.04
UBA3-208ENST00000465627 C1orf105O95561 183 aa8.58□□□□□ -1.04
UBA3-208ENST00000465627 ERGP11308 486 aa8.58□□□□□ -1.04
UBA3-208ENST00000465627 GFAPP14136 432 aa8.58□□□□□ -1.04
UBA3-208ENST00000465627 VCLP18206 1134 aa8.58□□□□□ -1.04
UBA3-208ENST00000465627 EEF1DP29692 281 aaKnown RBP8.58□□□□□ -1.04
UBA3-208ENST00000465627 AKT2P31751 481 aa8.58□□□□□ -1.04
UBA3-208ENST00000465627 MAPK9P45984 424 aa8.58□□□□□ -1.04
UBA3-208ENST00000465627 CCR3P51677 355 aa8.58□□□□□ -1.04
UBA3-208ENST00000465627 AP1S2P56377 157 aa8.58□□□□□ -1.04
UBA3-208ENST00000465627 NAA20P61599 178 aa8.58□□□□□ -1.04
UBA3-208ENST00000465627 SH3BP2P78314 561 aa8.58□□□□□ -1.04
UBA3-208ENST00000465627 PCDH1Q08174 1060 aa8.58□□□□□ -1.04
UBA3-208ENST00000465627 PRKAA1Q13131 559 aa8.58□□□□□ -1.04
UBA3-208ENST00000465627 ALG11Q2TAA5 492 aa8.58□□□□□ -1.04
UBA3-208ENST00000465627 CCSMST1Q4G0I0 132 aa8.58□□□□□ -1.04
UBA3-208ENST00000465627 FBXO48Q5FWF7 155 aa8.58□□□□□ -1.04
UBA3-208ENST00000465627 GKAP1Q5VSY0 366 aaPredicted RBP8.58□□□□□ -1.04
UBA3-208ENST00000465627 FAM219BQ5XKK7 198 aa8.58□□□□□ -1.04
UBA3-208ENST00000465627 SULT1C3Q6IMI6 304 aa8.58□□□□□ -1.04
UBA3-208ENST00000465627 TTC23LQ6PF05 361 aa8.58□□□□□ -1.04
UBA3-208ENST00000465627 UNC5DQ6UXZ4 953 aa8.58□□□□□ -1.04
UBA3-208ENST00000465627 CRLF3Q8IUI8 442 aa8.58□□□□□ -1.04
UBA3-208ENST00000465627 WDR75Q8IWA0 830 aaKnown RBP8.58□□□□□ -1.04
UBA3-208ENST00000465627 LRRC56Q8IYG6 542 aaPredicted RBP8.58□□□□□ -1.04
UBA3-208ENST00000465627 OR13H1Q8NG92 308 aa8.58□□□□□ -1.04
UBA3-208ENST00000465627 OR56A4Q8NGH8 313 aa8.58□□□□□ -1.04
UBA3-208ENST00000465627 MAPK15Q8TD08 544 aa8.58□□□□□ -1.04
UBA3-208ENST00000465627 AGAP11Q8TF27 550 aa8.58□□□□□ -1.04
UBA3-208ENST00000465627 EXT2Q93063 718 aa8.58□□□□□ -1.04
UBA3-208ENST00000465627 FBXL8Q96CD0 374 aa8.58□□□□□ -1.04
UBA3-208ENST00000465627 PDXPQ96GD0 296 aa8.58□□□□□ -1.04
UBA3-208ENST00000465627 RMDN2Q96LZ7 410 aa8.58□□□□□ -1.04
UBA3-208ENST00000465627 WDR92Q96MX6 357 aa8.58□□□□□ -1.04
UBA3-208ENST00000465627 MYOCQ99972 504 aa8.58□□□□□ -1.04
UBA3-208ENST00000465627 NPHS2Q9NP85 383 aa8.58□□□□□ -1.04
UBA3-208ENST00000465627 KLC4Q9NSK0 619 aa8.58□□□□□ -1.04
UBA3-208ENST00000465627 UTP6Q9NYH9 597 aaKnown RBP8.58□□□□□ -1.04
UBA3-208ENST00000465627 EIF2B4Q9UI10 523 aaKnown RBP8.58□□□□□ -1.04
UBA3-208ENST00000465627 SUFUQ9UMX1 484 aa8.58□□□□□ -1.04
UBA3-208ENST00000465627 PLEKHM1Q9Y4G2 1056 aa8.58□□□□□ -1.04
UBA3-208ENST00000465627 DGKBQ9Y6T7 804 aa8.58□□□□□ -1.04
UBA3-208ENST00000465627 ABCA7Q8IZY2 2146 aa8.57□□□□□ -1.04
UBA3-208ENST00000465627 POLQO75417 2590 aa8.57□□□□□ -1.04
UBA3-208ENST00000465627 SPAG17Q6Q759 2223 aa8.57□□□□□ -1.04
UBA3-208ENST00000465627 ATMQ13315 3056 aa8.57□□□□□ -1.04
UBA3-208ENST00000465627 NCF1BA6NI72 391 aaPredicted RBP8.57□□□□□ -1.04
UBA3-208ENST00000465627 NCF1CA8MVU1 366 aaPredicted RBP8.57□□□□□ -1.04
UBA3-208ENST00000465627 H3BM21 787 aa8.57□□□□□ -1.04
UBA3-208ENST00000465627 OR7A17O14581 309 aa8.57□□□□□ -1.04
UBA3-208ENST00000465627 PRAMEF4O60810 478 aa8.57□□□□□ -1.04
UBA3-208ENST00000465627 SUPT7LO94864 414 aa8.57□□□□□ -1.04
UBA3-208ENST00000465627 FSBPO95073 299 aa8.57□□□□□ -1.04
UBA3-208ENST00000465627 HSPA4LO95757 839 aa8.57□□□□□ -1.04
UBA3-208ENST00000465627 WNT1P04628 370 aa8.57□□□□□ -1.04
UBA3-208ENST00000465627 JUNP05412 331 aaKnown RBP8.57□□□□□ -1.04
UBA3-208ENST00000465627 NEFHP12036 1026 aa8.57□□□□□ -1.04
UBA3-208ENST00000465627 NCF1P14598 390 aaPredicted RBP8.57□□□□□ -1.04
UBA3-208ENST00000465627 BCKDHBP21953 392 aa8.57□□□□□ -1.04
UBA3-208ENST00000465627 CD27P26842 260 aa8.57□□□□□ -1.04
UBA3-208ENST00000465627 PBLDP30039 288 aaPredicted RBP8.57□□□□□ -1.04
UBA3-208ENST00000465627 PRDX3P30048 256 aaKnown RBP8.57□□□□□ -1.04
UBA3-208ENST00000465627 RABIFP47224 123 aa8.57□□□□□ -1.04
UBA3-208ENST00000465627 RPL14P50914 215 aaKnown RBP8.57□□□□□ -1.04
UBA3-208ENST00000465627 HK2P52789 917 aa8.57□□□□□ -1.04
UBA3-208ENST00000465627 INHBCP55103 352 aa8.57□□□□□ -1.04
UBA3-208ENST00000465627 CDH13P55290 713 aa8.57□□□□□ -1.04
UBA3-208ENST00000465627 CLCQ05315 142 aa8.57□□□□□ -1.04
UBA3-208ENST00000465627 ABRQ12979 859 aa8.57□□□□□ -1.04
UBA3-208ENST00000465627 LCP2Q13094 533 aa8.57□□□□□ -1.04
UBA3-208ENST00000465627 TRAF3Q13114 568 aa8.57□□□□□ -1.04
UBA3-208ENST00000465627 EIF2B5Q13144 721 aaKnown RBP8.57□□□□□ -1.04
UBA3-208ENST00000465627 E2F2Q14209 437 aa8.57□□□□□ -1.04
UBA3-208ENST00000465627 PLA2G4EQ3MJ16 856 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms