RNA–Protein interactions for RNA: ENST00000465155.5

ATF3-208, Transcript of activating transcription factor 3, human

TSL 2

Gene ATF3, Length 1,626 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATF3-208	ENST00000465155	TNPO3	Q9Y5L0	923 aa	Known RBP	13	□□□□□ -0.33
ATF3-208	ENST00000465155	LNP1	A1A4G5	178 aa		12.99	□□□□□ -0.33
ATF3-208	ENST00000465155	KDM1A	O60341	852 aa		12.99	□□□□□ -0.33
ATF3-208	ENST00000465155	CCNT2	O60583	730 aa	Known RBP	12.99	□□□□□ -0.33
ATF3-208	ENST00000465155	STK16	O75716	305 aa		12.99	□□□□□ -0.33
ATF3-208	ENST00000465155	SERPINE1	P05121	402 aa		12.99	□□□□□ -0.33
ATF3-208	ENST00000465155	GIMD1	P0DJR0	217 aa		12.99	□□□□□ -0.33
ATF3-208	ENST00000465155	GGT5	P36269	586 aa		12.99	□□□□□ -0.33
ATF3-208	ENST00000465155	GDF5	P43026	501 aa		12.99	□□□□□ -0.33
ATF3-208	ENST00000465155	PNLIPRP1	P54315	467 aa		12.99	□□□□□ -0.33
ATF3-208	ENST00000465155	STX3	Q13277	289 aa		12.99	□□□□□ -0.33
ATF3-208	ENST00000465155	NAE1	Q13564	534 aa		12.99	□□□□□ -0.33
ATF3-208	ENST00000465155	GPR18	Q14330	331 aa		12.99	□□□□□ -0.33
ATF3-208	ENST00000465155	PLCL1	Q15111	1095 aa		12.99	□□□□□ -0.33
ATF3-208	ENST00000465155	PCBP2	Q15366	365 aa	Known RBP eCLIP	12.99	□□□□□ -0.33
ATF3-208	ENST00000465155	PTCHD3	Q3KNS1	767 aa		12.99	□□□□□ -0.33
ATF3-208	ENST00000465155	UNC50	Q53HI1	259 aa		12.99	□□□□□ -0.33
ATF3-208	ENST00000465155	C6orf132	Q5T0Z8	1188 aa		12.99	□□□□□ -0.33
ATF3-208	ENST00000465155	CES4A	Q5XG92	561 aa		12.99	□□□□□ -0.33
ATF3-208	ENST00000465155	ANKS6	Q68DC2	871 aa		12.99	□□□□□ -0.33
ATF3-208	ENST00000465155	OGFOD3	Q6PK18	319 aa		12.99	□□□□□ -0.33
ATF3-208	ENST00000465155	RAB42	Q8N4Z0	105 aa		12.99	□□□□□ -0.33
ATF3-208	ENST00000465155	MINDY1	Q8N5J2	469 aa		12.99	□□□□□ -0.33
ATF3-208	ENST00000465155	C2orf73	Q8N5S3	287 aa	Predicted RBP	12.99	□□□□□ -0.33
ATF3-208	ENST00000465155	RAB3IL1	Q8TBN0	382 aa		12.99	□□□□□ -0.33
ATF3-208	ENST00000465155	PPP4R1	Q8TF05	950 aa		12.99	□□□□□ -0.33
ATF3-208	ENST00000465155	JPH3	Q8WXH2	748 aa	Predicted RBP	12.99	□□□□□ -0.33
ATF3-208	ENST00000465155	MED8	Q96G25	268 aa		12.99	□□□□□ -0.33
ATF3-208	ENST00000465155	MENT	Q9BUN1	341 aa		12.99	□□□□□ -0.33
ATF3-208	ENST00000465155	XKR8	Q9H6D3	395 aa		12.99	□□□□□ -0.33
ATF3-208	ENST00000465155	ABCF3	Q9NUQ8	709 aa		12.99	□□□□□ -0.33
ATF3-208	ENST00000465155	NLGN3	Q9NZ94	848 aa		12.99	□□□□□ -0.33
ATF3-208	ENST00000465155	SPATA7	Q9P0W8	599 aa		12.99	□□□□□ -0.33
ATF3-208	ENST00000465155	ICK	Q9UPZ9	632 aa		12.99	□□□□□ -0.33
ATF3-208	ENST00000465155	E2F3	O00716	465 aa		12.99	□□□□□ -0.33
ATF3-208	ENST00000465155	WDR47	O94967	919 aa		12.99	□□□□□ -0.33
ATF3-208	ENST00000465155	RPS17	P08708	135 aa	Known RBP	12.99	□□□□□ -0.33
ATF3-208	ENST00000465155	ZNF806	P0C7X5	589 aa		12.99	□□□□□ -0.33
ATF3-208	ENST00000465155	ERG	P11308	486 aa		12.99	□□□□□ -0.33
ATF3-208	ENST00000465155	GRK2	P25098	689 aa		12.99	□□□□□ -0.33
ATF3-208	ENST00000465155	HSD17B2	P37059	387 aa		12.99	□□□□□ -0.33
ATF3-208	ENST00000465155	RAB28	P51157	221 aa		12.99	□□□□□ -0.33
ATF3-208	ENST00000465155	GNGT1	P63211	74 aa		12.99	□□□□□ -0.33
ATF3-208	ENST00000465155	BST1	Q10588	318 aa		12.99	□□□□□ -0.33
ATF3-208	ENST00000465155	BIRC2	Q13490	618 aa		12.99	□□□□□ -0.33
ATF3-208	ENST00000465155	TSTA3	Q13630	321 aa	Predicted RBP	12.99	□□□□□ -0.33
ATF3-208	ENST00000465155	FASTK	Q14296	549 aa	Known RBP	12.99	□□□□□ -0.33
ATF3-208	ENST00000465155	ARHGAP19	Q14CB8	494 aa		12.99	□□□□□ -0.33
ATF3-208	ENST00000465155	C14orf28	Q4W4Y0	310 aa		12.99	□□□□□ -0.33
ATF3-208	ENST00000465155	ATG16L1	Q676U5	607 aa		12.99	□□□□□ -0.33
ATF3-208	ENST00000465155	ARL14	Q8N4G2	192 aa		12.99	□□□□□ -0.33
ATF3-208	ENST00000465155	AVL9	Q8NBF6	648 aa		12.99	□□□□□ -0.33
ATF3-208	ENST00000465155	KY	Q8NBH2	561 aa		12.99	□□□□□ -0.33
ATF3-208	ENST00000465155	GPR156	Q8NFN8	814 aa		12.99	□□□□□ -0.33
ATF3-208	ENST00000465155	OR6Y1	Q8NGX8	325 aa		12.99	□□□□□ -0.33
ATF3-208	ENST00000465155	ZFPM2	Q8WW38	1151 aa		12.99	□□□□□ -0.33
ATF3-208	ENST00000465155	LCN9	Q8WX39	176 aa		12.99	□□□□□ -0.33
ATF3-208	ENST00000465155	NSUN5	Q96P11	429 aa	Known RBP	12.99	□□□□□ -0.33
ATF3-208	ENST00000465155	RAB11FIP5	Q9BXF6	653 aa		12.99	□□□□□ -0.33
ATF3-208	ENST00000465155	C1QTNF3	Q9BXJ4	246 aa		12.99	□□□□□ -0.33
ATF3-208	ENST00000465155	GSTO2	Q9H4Y5	243 aa		12.99	□□□□□ -0.33
ATF3-208	ENST00000465155	SLC32A1	Q9H598	525 aa		12.99	□□□□□ -0.33
ATF3-208	ENST00000465155	STN1	Q9H668	368 aa	Known RBP	12.99	□□□□□ -0.33
ATF3-208	ENST00000465155	OPTC	Q9UBM4	332 aa		12.99	□□□□□ -0.33
ATF3-208	ENST00000465155	ADAM21	Q9UKJ8	722 aa		12.99	□□□□□ -0.33
ATF3-208	ENST00000465155	PCTP	Q9UKL6	214 aa		12.99	□□□□□ -0.33
ATF3-208	ENST00000465155	ZNF839	A8K0R7	811 aa		12.98	□□□□□ -0.33
ATF3-208	ENST00000465155		E7ENX8	843 aa		12.98	□□□□□ -0.33
ATF3-208	ENST00000465155		K7EPI3	171 aa		12.98	□□□□□ -0.33
ATF3-208	ENST00000465155	KLF11	O14901	512 aa		12.98	□□□□□ -0.33
ATF3-208	ENST00000465155	ALPPL2	P10696	532 aa		12.98	□□□□□ -0.33
ATF3-208	ENST00000465155	TSPAN8	P19075	237 aa		12.98	□□□□□ -0.33
ATF3-208	ENST00000465155	PKLR	P30613	574 aa		12.98	□□□□□ -0.33
ATF3-208	ENST00000465155	NBL1	P41271	181 aa		12.98	□□□□□ -0.33
ATF3-208	ENST00000465155	CCR10	P46092	362 aa		12.98	□□□□□ -0.33
ATF3-208	ENST00000465155	FASLG	P48023	281 aa		12.98	□□□□□ -0.33
ATF3-208	ENST00000465155	SLC6A12	P48065	614 aa		12.98	□□□□□ -0.33
ATF3-208	ENST00000465155	CDH13	P55290	713 aa		12.98	□□□□□ -0.33
ATF3-208	ENST00000465155	TBPL1	P62380	186 aa		12.98	□□□□□ -0.33
ATF3-208	ENST00000465155	TAP2	Q03519	686 aa		12.98	□□□□□ -0.33
ATF3-208	ENST00000465155	SPEM2	Q0P670	501 aa		12.98	□□□□□ -0.33
ATF3-208	ENST00000465155	GTF2H2	Q13888	395 aa		12.98	□□□□□ -0.33
ATF3-208	ENST00000465155	RCN2	Q14257	317 aa		12.98	□□□□□ -0.33
ATF3-208	ENST00000465155	SF3A2	Q15428	464 aa	Known RBP	12.98	□□□□□ -0.33
ATF3-208	ENST00000465155	CYP2A13	Q16696	494 aa		12.98	□□□□□ -0.33
ATF3-208	ENST00000465155	ZCCHC8	Q6NZY4	707 aa	Known RBP	12.98	□□□□□ -0.33
ATF3-208	ENST00000465155	GTF2H2C	Q6P1K8	395 aa		12.98	□□□□□ -0.33
ATF3-208	ENST00000465155	SUSD1	Q6UWL2	747 aa		12.98	□□□□□ -0.33
ATF3-208	ENST00000465155	FRMD7	Q6ZUT3	714 aa		12.98	□□□□□ -0.33
ATF3-208	ENST00000465155	C17orf82	Q86X59	251 aa	Predicted RBP	12.98	□□□□□ -0.33
ATF3-208	ENST00000465155	ZNF761	Q86XN6	746 aa	Predicted RBP	12.98	□□□□□ -0.33
ATF3-208	ENST00000465155	RBM12B	Q8IXT5	1001 aa	Known RBP	12.98	□□□□□ -0.33
ATF3-208	ENST00000465155	LRRC56	Q8IYG6	542 aa	Predicted RBP	12.98	□□□□□ -0.33
ATF3-208	ENST00000465155	TEX9	Q8N6V9	391 aa		12.98	□□□□□ -0.33
ATF3-208	ENST00000465155	ARL10	Q8N8L6	244 aa		12.98	□□□□□ -0.33
ATF3-208	ENST00000465155	LINC01555	Q8NAE3	123 aa		12.98	□□□□□ -0.33
ATF3-208	ENST00000465155	OR4E2	Q8NGC2	313 aa		12.98	□□□□□ -0.33
ATF3-208	ENST00000465155	OR56A3	Q8NH54	315 aa		12.98	□□□□□ -0.33
ATF3-208	ENST00000465155	OR4C6	Q8NH72	309 aa		12.98	□□□□□ -0.33
ATF3-208	ENST00000465155	ZNF483	Q8TF39	744 aa	Predicted RBP	12.98	□□□□□ -0.33

Retrieved 100 of 20,778 RNA–protein pairs in 102.2 ms