RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 SPACA3Q8IXA5 215 aa17.1■□□□□ 0.33
VPS52-214ENST00000463486 SKA2Q8WVK7 121 aaPredicted RBP17.1■□□□□ 0.33
VPS52-214ENST00000463486 FAM129AQ9BZQ8 928 aa17.1■□□□□ 0.33
VPS52-214ENST00000463486 SNRNP200O75643 2136 aaKnown RBP17.09■□□□□ 0.33
VPS52-214ENST00000463486 A0A1W2PPV9 198 aa17.09■□□□□ 0.33
VPS52-214ENST00000463486 POLR1CO15160 346 aaPredicted RBP17.09■□□□□ 0.33
VPS52-214ENST00000463486 EBLN1P0CF75 366 aa17.09■□□□□ 0.33
VPS52-214ENST00000463486 IL11RAQ14626 422 aa17.09■□□□□ 0.33
VPS52-214ENST00000463486 KIR2DS3Q14952 304 aa17.09■□□□□ 0.33
VPS52-214ENST00000463486 CYP2A13Q16696 494 aa17.09■□□□□ 0.33
VPS52-214ENST00000463486 TIPARPQ7Z3E1 657 aaKnown RBP17.09■□□□□ 0.33
VPS52-214ENST00000463486 C2orf73Q8N5S3 287 aaPredicted RBP17.09■□□□□ 0.33
VPS52-214ENST00000463486 NAF1Q96HR8 494 aaKnown RBP17.09■□□□□ 0.33
VPS52-214ENST00000463486 DCBLD2Q96PD2 775 aa17.09■□□□□ 0.33
VPS52-214ENST00000463486 TEFMQ96QE5 360 aaKnown RBP17.09■□□□□ 0.33
VPS52-214ENST00000463486 OR6C1Q96RD1 312 aa17.09■□□□□ 0.33
VPS52-214ENST00000463486 DPH1Q9BZG8 443 aa17.09■□□□□ 0.33
VPS52-214ENST00000463486 CHRNA10Q9GZZ6 450 aa17.09■□□□□ 0.33
VPS52-214ENST00000463486 RHOJQ9H4E5 214 aa17.09■□□□□ 0.33
VPS52-214ENST00000463486 TRMT6Q9UJA5 497 aaKnown RBP17.09■□□□□ 0.33
VPS52-214ENST00000463486 PILRAQ9UKJ1 303 aa17.09■□□□□ 0.33
VPS52-214ENST00000463486 IGSF10Q6WRI0 2623 aa17.08■□□□□ 0.33
VPS52-214ENST00000463486 EFSO43281 561 aa17.08■□□□□ 0.32
VPS52-214ENST00000463486 HCRTR1O43613 425 aa17.08■□□□□ 0.32
VPS52-214ENST00000463486 WISP3O95389 354 aaPredicted RBP17.08■□□□□ 0.32
VPS52-214ENST00000463486 MSL3P1P0C860 447 aa17.08■□□□□ 0.32
VPS52-214ENST00000463486 ZNF28P17035 718 aa17.08■□□□□ 0.32
VPS52-214ENST00000463486 CDH3P22223 829 aa17.08■□□□□ 0.32
VPS52-214ENST00000463486 CD82P27701 267 aa17.08■□□□□ 0.32
VPS52-214ENST00000463486 GABRA4P48169 554 aa17.08■□□□□ 0.32
VPS52-214ENST00000463486 FASTKQ14296 549 aaKnown RBP17.08■□□□□ 0.32
VPS52-214ENST00000463486 SLC5A12Q1EHB4 618 aa17.08■□□□□ 0.32
VPS52-214ENST00000463486 KBTBD12Q3ZCT8 623 aa17.08■□□□□ 0.32
VPS52-214ENST00000463486 FAM45BPQ6NSW5 357 aa17.08■□□□□ 0.32
VPS52-214ENST00000463486 UGT3A1Q6NUS8 523 aa17.08■□□□□ 0.32
VPS52-214ENST00000463486 CEACAM20Q6UY09 585 aa17.08■□□□□ 0.32
VPS52-214ENST00000463486 FAM20CQ8IXL6 584 aa17.08■□□□□ 0.32
VPS52-214ENST00000463486 GPATCH11Q8N954 259 aa17.08■□□□□ 0.32
VPS52-214ENST00000463486 OR9A1PQ8NGU1 263 aa17.08■□□□□ 0.32
VPS52-214ENST00000463486 FAM45AQ8TCE6 357 aa17.08■□□□□ 0.32
VPS52-214ENST00000463486 KCNE4Q8WWG9 221 aa17.08■□□□□ 0.32
VPS52-214ENST00000463486 ZNF501Q96CX3 271 aaPredicted RBP17.08■□□□□ 0.32
VPS52-214ENST00000463486 FOPNLQ96NB1 174 aa17.08■□□□□ 0.32
VPS52-214ENST00000463486 PKP4Q99569 1192 aa17.08■□□□□ 0.32
VPS52-214ENST00000463486 ZPBPQ9BS86 351 aa17.08■□□□□ 0.32
VPS52-214ENST00000463486 FAM60AQ9NP50 221 aa17.08■□□□□ 0.32
VPS52-214ENST00000463486 ADAMTS6Q9UKP5 1117 aa17.08■□□□□ 0.32
VPS52-214ENST00000463486 IKZF3Q9UKT9 509 aa17.08■□□□□ 0.32
VPS52-214ENST00000463486 MTO1Q9Y2Z2 717 aaKnown RBP17.08■□□□□ 0.32
VPS52-214ENST00000463486 TMEM184BQ9Y519 407 aaPredicted RBP17.08■□□□□ 0.32
VPS52-214ENST00000463486 RRP8O43159 456 aaKnown RBP17.07■□□□□ 0.32
VPS52-214ENST00000463486 ZNF500O60304 480 aaPredicted RBP17.07■□□□□ 0.32
VPS52-214ENST00000463486 KDM1AO60341 852 aa17.07■□□□□ 0.32
VPS52-214ENST00000463486 TIAF1O95411 115 aa17.07■□□□□ 0.32
VPS52-214ENST00000463486 DLGAP3O95886 979 aa17.07■□□□□ 0.32
VPS52-214ENST00000463486 LIPCP11150 499 aa17.07■□□□□ 0.32
VPS52-214ENST00000463486 SPTBP11277 2137 aa17.07■□□□□ 0.32
VPS52-214ENST00000463486 TAS2R39P59534 338 aa17.07■□□□□ 0.32
VPS52-214ENST00000463486 FOXM1Q08050 763 aa17.07■□□□□ 0.32
VPS52-214ENST00000463486 GPR19Q15760 415 aa17.07■□□□□ 0.32
VPS52-214ENST00000463486 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.07■□□□□ 0.32
VPS52-214ENST00000463486 TTC23LQ6PF05 361 aa17.07■□□□□ 0.32
VPS52-214ENST00000463486 CDHR3Q6ZTQ4 885 aa17.07■□□□□ 0.32
VPS52-214ENST00000463486 CEP97Q8IW35 865 aa17.07■□□□□ 0.32
VPS52-214ENST00000463486 LRRC56Q8IYG6 542 aaPredicted RBP17.07■□□□□ 0.32
VPS52-214ENST00000463486 OR2A1Q8NGT9 310 aa17.07■□□□□ 0.32
VPS52-214ENST00000463486 MAGEC3Q8TD91 643 aa17.07■□□□□ 0.32
VPS52-214ENST00000463486 FBF1Q8TES7 1133 aa17.07■□□□□ 0.32
VPS52-214ENST00000463486 HNRNPLLQ8WVV9 542 aaKnown RBP17.07■□□□□ 0.32
VPS52-214ENST00000463486 IFT81Q8WYA0 676 aa17.07■□□□□ 0.32
VPS52-214ENST00000463486 PDLIM5Q96HC4 596 aaKnown RBP17.07■□□□□ 0.32
VPS52-214ENST00000463486 VPS39Q96JC1 886 aa17.07■□□□□ 0.32
VPS52-214ENST00000463486 KLHL25Q9H0H3 589 aa17.07■□□□□ 0.32
VPS52-214ENST00000463486 FGF21Q9NSA1 209 aa17.07■□□□□ 0.32
VPS52-214ENST00000463486 NSMCE4AQ9NXX6 385 aa17.07■□□□□ 0.32
VPS52-214ENST00000463486 NINJ2Q9NZG7 142 aa17.07■□□□□ 0.32
VPS52-214ENST00000463486 SPATA7Q9P0W8 599 aa17.07■□□□□ 0.32
VPS52-214ENST00000463486 SLC39A10Q9ULF5 831 aa17.07■□□□□ 0.32
VPS52-214ENST00000463486 A0A0J9YY10 115 aa17.06■□□□□ 0.32
VPS52-214ENST00000463486 FAM95CA0A1B0GW59 222 aa17.06■□□□□ 0.32
VPS52-214ENST00000463486 H3BMH7 237 aa17.06■□□□□ 0.32
VPS52-214ENST00000463486 KLK10O43240 276 aa17.06■□□□□ 0.32
VPS52-214ENST00000463486 SPAG6O75602 509 aa17.06■□□□□ 0.32
VPS52-214ENST00000463486 CATP04040 527 aaKnown RBP17.06■□□□□ 0.32
VPS52-214ENST00000463486 YBX1P67809 324 aaKnown RBP17.06■□□□□ 0.32
VPS52-214ENST00000463486 TUBB4BP68371 445 aa17.06■□□□□ 0.32
VPS52-214ENST00000463486 TUBB3Q13509 450 aa17.06■□□□□ 0.32
VPS52-214ENST00000463486 ZXDCQ2QGD7 858 aaPredicted RBP17.06■□□□□ 0.32
VPS52-214ENST00000463486 PWWP2BQ6NUJ5 590 aa17.06■□□□□ 0.32
VPS52-214ENST00000463486 ZNF480Q8WV37 535 aa17.06■□□□□ 0.32
VPS52-214ENST00000463486 NKD1Q969G9 470 aa17.06■□□□□ 0.32
VPS52-214ENST00000463486 CRELD1Q96HD1 420 aa17.06■□□□□ 0.32
VPS52-214ENST00000463486 CPNE1Q99829 537 aa17.06■□□□□ 0.32
VPS52-214ENST00000463486 RAB11FIP5Q9BXF6 653 aa17.06■□□□□ 0.32
VPS52-214ENST00000463486 SLC12A9Q9BXP2 914 aa17.06■□□□□ 0.32
VPS52-214ENST00000463486 FUT8Q9BYC5 575 aa17.06■□□□□ 0.32
VPS52-214ENST00000463486 PDE10AQ9Y233 779 aa17.06■□□□□ 0.32
VPS52-214ENST00000463486 KLK4Q9Y5K2 254 aa17.06■□□□□ 0.32
VPS52-214ENST00000463486 ISM1B1AKI9 464 aa17.05■□□□□ 0.32
VPS52-214ENST00000463486 E7ENX8 843 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms