RNA–Protein interactions for RNA: ENST00000463372.5

C9orf3-211, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 919 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-211ENST00000463372 PPM1NQ8N819 430 aa12.68□□□□□ -0.38
C9orf3-211ENST00000463372 TTYH2Q9BSA4 534 aa12.68□□□□□ -0.38
C9orf3-211ENST00000463372 TDRD1Q9BXT4 1180 aaKnown RBP12.68□□□□□ -0.38
C9orf3-211ENST00000463372 ZCCHC2Q9C0B9 1178 aaKnown RBP12.68□□□□□ -0.38
C9orf3-211ENST00000463372 ATG10Q9H0Y0 220 aa12.68□□□□□ -0.38
C9orf3-211ENST00000463372 NT5MQ9NPB1 228 aa12.68□□□□□ -0.38
C9orf3-211ENST00000463372 NLRC4Q9NPP4 1024 aa12.68□□□□□ -0.38
C9orf3-211ENST00000463372 EURLQ9NYK6 297 aa12.68□□□□□ -0.38
C9orf3-211ENST00000463372 CDC42EP3Q9UKI2 254 aa12.68□□□□□ -0.38
C9orf3-211ENST00000463372 A0A1B0GVL5 298 aa12.67□□□□□ -0.38
C9orf3-211ENST00000463372 PFKFB1P16118 471 aa12.67□□□□□ -0.38
C9orf3-211ENST00000463372 TFEBP19484 476 aa12.67□□□□□ -0.38
C9orf3-211ENST00000463372 ACVR2AP27037 513 aa12.67□□□□□ -0.38
C9orf3-211ENST00000463372 ST13P50502 369 aaKnown RBP12.67□□□□□ -0.38
C9orf3-211ENST00000463372 EMP2P54851 167 aa12.67□□□□□ -0.38
C9orf3-211ENST00000463372 YOD1Q5VVQ6 348 aaPredicted RBP12.67□□□□□ -0.38
C9orf3-211ENST00000463372 TAF3Q5VWG9 929 aa12.67□□□□□ -0.38
C9orf3-211ENST00000463372 ACAD10Q6JQN1 1059 aa12.67□□□□□ -0.38
C9orf3-211ENST00000463372 B3GNT6Q6ZMB0 384 aa12.67□□□□□ -0.38
C9orf3-211ENST00000463372 SLC13A5Q86YT5 568 aaPredicted RBP12.67□□□□□ -0.38
C9orf3-211ENST00000463372 DNAJC22Q8N4W6 341 aa12.67□□□□□ -0.38
C9orf3-211ENST00000463372 POGLUT1Q8NBL1 392 aa12.67□□□□□ -0.38
C9orf3-211ENST00000463372 VPS35Q96QK1 796 aa12.67□□□□□ -0.38
C9orf3-211ENST00000463372 FERD3LQ96RJ6 166 aa12.67□□□□□ -0.38
C9orf3-211ENST00000463372 CRACR2AQ9BSW2 395 aa12.67□□□□□ -0.38
C9orf3-211ENST00000463372 POLR1EQ9GZS1 481 aaKnown RBP12.67□□□□□ -0.38
C9orf3-211ENST00000463372 PCDH9Q9HC56 1237 aa12.67□□□□□ -0.38
C9orf3-211ENST00000463372 FAM8A1Q9UBU6 413 aa12.67□□□□□ -0.38
C9orf3-211ENST00000463372 B4GALT7Q9UBV7 327 aa12.67□□□□□ -0.38
C9orf3-211ENST00000463372 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.67□□□□□ -0.38
C9orf3-211ENST00000463372 HEATR5AQ86XA9 2040 aa12.66□□□□□ -0.38
C9orf3-211ENST00000463372 OR2AG2A6NM03 316 aa12.66□□□□□ -0.38
C9orf3-211ENST00000463372 PRLP01236 227 aa12.66□□□□□ -0.38
C9orf3-211ENST00000463372 SLC4A1P02730 911 aa12.66□□□□□ -0.38
C9orf3-211ENST00000463372 GLI4P10075 376 aa12.66□□□□□ -0.38
C9orf3-211ENST00000463372 KRT3P12035 628 aa12.66□□□□□ -0.38
C9orf3-211ENST00000463372 MEP1AQ16819 746 aa12.66□□□□□ -0.38
C9orf3-211ENST00000463372 NAA35Q5VZE5 725 aa12.66□□□□□ -0.38
C9orf3-211ENST00000463372 TMEM220Q6QAJ8 160 aa12.66□□□□□ -0.38
C9orf3-211ENST00000463372 ARHGEF18Q6ZSZ5 1173 aa12.66□□□□□ -0.38
C9orf3-211ENST00000463372 RFX8Q6ZV50 586 aa12.66□□□□□ -0.38
C9orf3-211ENST00000463372 ADGRF3Q8IZF5 1079 aa12.66□□□□□ -0.38
C9orf3-211ENST00000463372 LGI4Q8N135 537 aa12.66□□□□□ -0.38
C9orf3-211ENST00000463372 RNASE6Q93091 150 aaKnown RBP12.66□□□□□ -0.38
C9orf3-211ENST00000463372 RBM41Q96IZ5 413 aaKnown RBP12.66□□□□□ -0.38
C9orf3-211ENST00000463372 TUBB6Q9BUF5 446 aa12.66□□□□□ -0.38
C9orf3-211ENST00000463372 ZNF700Q9H0M5 742 aa12.66□□□□□ -0.38
C9orf3-211ENST00000463372 TFB2MQ9H5Q4 396 aaKnown RBP12.66□□□□□ -0.38
C9orf3-211ENST00000463372 ZNF304Q9HCX3 659 aa12.66□□□□□ -0.38
C9orf3-211ENST00000463372 NFKBIL1Q9UBC1 381 aaPredicted RBP12.66□□□□□ -0.38
C9orf3-211ENST00000463372 A0A0J9YY10 115 aa12.65□□□□□ -0.38
C9orf3-211ENST00000463372 HYKKA2RU49 373 aa12.65□□□□□ -0.38
C9orf3-211ENST00000463372 FIGNL2A6NMB9 653 aa12.65□□□□□ -0.38
C9orf3-211ENST00000463372 FOXN3O00409 490 aaPredicted RBP12.65□□□□□ -0.38
C9orf3-211ENST00000463372 DDX3XO00571 662 aaKnown RBP eCLIP12.65□□□□□ -0.38
C9orf3-211ENST00000463372 CCP110O43303 1012 aa12.65□□□□□ -0.38
C9orf3-211ENST00000463372 HS6ST1O60243 411 aa12.65□□□□□ -0.38
C9orf3-211ENST00000463372 PDE9AO76083 593 aa12.65□□□□□ -0.38
C9orf3-211ENST00000463372 HRGP04196 525 aa12.65□□□□□ -0.38
C9orf3-211ENST00000463372 PNMA6AP0CW24 399 aaPredicted RBP12.65□□□□□ -0.38
C9orf3-211ENST00000463372 UGT2B7P16662 529 aa12.65□□□□□ -0.38
C9orf3-211ENST00000463372 CES1P23141 567 aa12.65□□□□□ -0.38
C9orf3-211ENST00000463372 CDH6P55285 790 aa12.65□□□□□ -0.38
C9orf3-211ENST00000463372 APBA1Q02410 837 aa12.65□□□□□ -0.38
C9orf3-211ENST00000463372 GRM7Q14831 915 aa12.65□□□□□ -0.38
C9orf3-211ENST00000463372 GXYLT1Q4G148 440 aa12.65□□□□□ -0.38
C9orf3-211ENST00000463372 SARM1Q6SZW1 724 aa12.65□□□□□ -0.38
C9orf3-211ENST00000463372 LAPTM4BQ86VI4 370 aa12.65□□□□□ -0.38
C9orf3-211ENST00000463372 RASGEF1AQ8N9B8 481 aa12.65□□□□□ -0.38
C9orf3-211ENST00000463372 TTC29Q8NA56 475 aaPredicted RBP12.65□□□□□ -0.38
C9orf3-211ENST00000463372 OR52E1Q8NGJ3 308 aa12.65□□□□□ -0.38
C9orf3-211ENST00000463372 EID2BQ96D98 161 aa12.65□□□□□ -0.38
C9orf3-211ENST00000463372 RMDN2Q96LZ7 410 aa12.65□□□□□ -0.38
C9orf3-211ENST00000463372 CCL19Q99731 98 aa12.65□□□□□ -0.38
C9orf3-211ENST00000463372 NRTNQ99748 197 aa12.65□□□□□ -0.38
C9orf3-211ENST00000463372 DHX35Q9H5Z1 703 aaKnown RBP12.65□□□□□ -0.38
C9orf3-211ENST00000463372 XKR8Q9H6D3 395 aa12.65□□□□□ -0.38
C9orf3-211ENST00000463372 FOXD3Q9UJU5 478 aaPredicted RBP12.65□□□□□ -0.38
C9orf3-211ENST00000463372 AP4E1Q9UPM8 1137 aa12.65□□□□□ -0.38
C9orf3-211ENST00000463372 MGAT4DA6NG13 374 aa12.64□□□□□ -0.39
C9orf3-211ENST00000463372 ANKRD66B4E2M5 251 aa12.64□□□□□ -0.39
C9orf3-211ENST00000463372 FAM47E-STBD1D6RA91 191 aa12.64□□□□□ -0.39
C9orf3-211ENST00000463372 CD5LO43866 347 aa12.64□□□□□ -0.39
C9orf3-211ENST00000463372 NME2P1O60361 137 aa12.64□□□□□ -0.39
C9orf3-211ENST00000463372 MAFKO60675 156 aa12.64□□□□□ -0.39
C9orf3-211ENST00000463372 SLC25A12O75746 678 aa12.64□□□□□ -0.39
C9orf3-211ENST00000463372 STATHP02808 62 aa12.64□□□□□ -0.39
C9orf3-211ENST00000463372 CYP1A1P04798 512 aaPredicted RBP12.64□□□□□ -0.39
C9orf3-211ENST00000463372 POLBP06746 335 aa12.64□□□□□ -0.39
C9orf3-211ENST00000463372 HEXBP07686 556 aa12.64□□□□□ -0.39
C9orf3-211ENST00000463372 SLC9A1P19634 815 aa12.64□□□□□ -0.39
C9orf3-211ENST00000463372 NME2P22392 152 aa12.64□□□□□ -0.39
C9orf3-211ENST00000463372 ASCL1P50553 236 aa12.64□□□□□ -0.39
C9orf3-211ENST00000463372 NOMO3P69849 1222 aa12.64□□□□□ -0.39
C9orf3-211ENST00000463372 AP1B1Q10567 949 aa12.64□□□□□ -0.39
C9orf3-211ENST00000463372 QPCTQ16769 361 aa12.64□□□□□ -0.39
C9orf3-211ENST00000463372 FAM214AQ32MH5 1076 aa12.64□□□□□ -0.39
C9orf3-211ENST00000463372 ATP13A5Q4VNC0 1218 aa12.64□□□□□ -0.39
C9orf3-211ENST00000463372 CMPK2Q5EBM0 449 aa12.64□□□□□ -0.39
C9orf3-211ENST00000463372 ZNF585AQ6P3V2 769 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms