RNA–Protein interactions for RNA: ENST00000462482.1

SKA3-204, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-204ENST00000462482 FTCDO95954 541 aa14.8□□□□□ -0.04
SKA3-204ENST00000462482 S1PR4O95977 384 aa14.8□□□□□ -0.04
SKA3-204ENST00000462482 GOT2P00505 430 aaKnown RBP14.8□□□□□ -0.04
SKA3-204ENST00000462482 IFNB1P01574 187 aa14.8□□□□□ -0.04
SKA3-204ENST00000462482 ITGAXP20702 1163 aa14.8□□□□□ -0.04
SKA3-204ENST00000462482 PKLRP30613 574 aa14.8□□□□□ -0.04
SKA3-204ENST00000462482 GLRBP48167 497 aa14.8□□□□□ -0.04
SKA3-204ENST00000462482 ZNF75DP51815 510 aa14.8□□□□□ -0.04
SKA3-204ENST00000462482 GDF10P55107 478 aa14.8□□□□□ -0.04
SKA3-204ENST00000462482 SOX8P57073 446 aa14.8□□□□□ -0.04
SKA3-204ENST00000462482 GRM7Q14831 915 aa14.8□□□□□ -0.04
SKA3-204ENST00000462482 TCTE1Q5JU00 501 aa14.8□□□□□ -0.04
SKA3-204ENST00000462482 TSTD2Q5T7W7 516 aa14.8□□□□□ -0.04
SKA3-204ENST00000462482 YOD1Q5VVQ6 348 aaPredicted RBP14.8□□□□□ -0.04
SKA3-204ENST00000462482 HIST2H2BCQ6DN03 193 aa14.8□□□□□ -0.04
SKA3-204ENST00000462482 MRPL14Q6P1L8 145 aaKnown RBP14.8□□□□□ -0.04
SKA3-204ENST00000462482 UNC5DQ6UXZ4 953 aa14.8□□□□□ -0.04
SKA3-204ENST00000462482 MICALCLQ6ZW33 695 aa14.8□□□□□ -0.04
SKA3-204ENST00000462482 LURAP1LQ8IV03 231 aa14.8□□□□□ -0.04
SKA3-204ENST00000462482 SLC22A15Q8IZD6 547 aa14.8□□□□□ -0.04
SKA3-204ENST00000462482 ACRBPQ8NEB7 543 aa14.8□□□□□ -0.04
SKA3-204ENST00000462482 FKBP10Q96AY3 582 aa14.8□□□□□ -0.04
SKA3-204ENST00000462482 C19orf60Q96EN9 201 aa14.8□□□□□ -0.04
SKA3-204ENST00000462482 C5orf34Q96MH7 638 aa14.8□□□□□ -0.04
SKA3-204ENST00000462482 RAB11FIP5Q9BXF6 653 aa14.8□□□□□ -0.04
SKA3-204ENST00000462482 FRMD8P1Q9BZ68 369 aaPredicted RBP14.8□□□□□ -0.04
SKA3-204ENST00000462482 ZNF552Q9H707 407 aaPredicted RBP14.8□□□□□ -0.04
SKA3-204ENST00000462482 NXT1Q9UKK6 140 aaKnown RBP14.8□□□□□ -0.04
SKA3-204ENST00000462482 R3HDM2Q9Y2K5 976 aaKnown RBP14.8□□□□□ -0.04
SKA3-204ENST00000462482 ANKUB1A6NFN9 424 aa14.79□□□□□ -0.04
SKA3-204ENST00000462482 HCRTR1O43613 425 aa14.79□□□□□ -0.04
SKA3-204ENST00000462482 FKBP9O95302 570 aa14.79□□□□□ -0.04
SKA3-204ENST00000462482 ALBP02768 609 aa14.79□□□□□ -0.04
SKA3-204ENST00000462482 CD9P21926 228 aa14.79□□□□□ -0.04
SKA3-204ENST00000462482 MMP11P24347 488 aa14.79□□□□□ -0.04
SKA3-204ENST00000462482 KLF1Q13351 362 aaPredicted RBP14.79□□□□□ -0.04
SKA3-204ENST00000462482 SF1Q15637 639 aaKnown RBP14.79□□□□□ -0.04
SKA3-204ENST00000462482 SEL1L2Q5TEA6 688 aa14.79□□□□□ -0.04
SKA3-204ENST00000462482 PTRHD1Q6GMV3 140 aaKnown RBP14.79□□□□□ -0.04
SKA3-204ENST00000462482 RAD9BQ6WBX8 426 aa14.79□□□□□ -0.04
SKA3-204ENST00000462482 MAMDC2Q7Z304 686 aaPredicted RBP14.79□□□□□ -0.04
SKA3-204ENST00000462482 PPP1R32Q7Z5V6 425 aa14.79□□□□□ -0.04
SKA3-204ENST00000462482 PPHLN1Q8NEY8 458 aaKnown RBP14.79□□□□□ -0.04
SKA3-204ENST00000462482 OR13J1Q8NGT2 312 aa14.79□□□□□ -0.04
SKA3-204ENST00000462482 FLVCR1-AS1Q8TAF5 88 aa14.79□□□□□ -0.04
SKA3-204ENST00000462482 COG1Q8WTW3 980 aa14.79□□□□□ -0.04
SKA3-204ENST00000462482 SKA2Q8WVK7 121 aaPredicted RBP14.79□□□□□ -0.04
SKA3-204ENST00000462482 RANBP9Q96S59 729 aa14.79□□□□□ -0.04
SKA3-204ENST00000462482 CARD6Q9BX69 1037 aa14.79□□□□□ -0.04
SKA3-204ENST00000462482 WDR54Q9H977 334 aa14.79□□□□□ -0.04
SKA3-204ENST00000462482 MRM3Q9HC36 420 aaKnown RBP14.79□□□□□ -0.04
SKA3-204ENST00000462482 IL1RAPL1Q9NZN1 696 aa14.79□□□□□ -0.04
SKA3-204ENST00000462482 PACSIN2Q9UNF0 486 aaPredicted RBP14.79□□□□□ -0.04
SKA3-204ENST00000462482 ZNF148Q9UQR1 794 aa14.79□□□□□ -0.04
SKA3-204ENST00000462482 SLC5A6Q9Y289 635 aa14.79□□□□□ -0.04
SKA3-204ENST00000462482 REXO2Q9Y3B8 237 aaKnown RBP14.79□□□□□ -0.04
SKA3-204ENST00000462482 KPNA5O15131 536 aa14.78□□□□□ -0.04
SKA3-204ENST00000462482 CBX6O95503 412 aa14.78□□□□□ -0.04
SKA3-204ENST00000462482 UMODP07911 640 aa14.78□□□□□ -0.04
SKA3-204ENST00000462482 TPBGLP0DKB5 382 aa14.78□□□□□ -0.04
SKA3-204ENST00000462482 CCR7P32248 378 aa14.78□□□□□ -0.04
SKA3-204ENST00000462482 TTPAP49638 278 aa14.78□□□□□ -0.04
SKA3-204ENST00000462482 FAM214AQ32MH5 1076 aa14.78□□□□□ -0.04
SKA3-204ENST00000462482 AGAP7PQ5VUJ5 663 aa14.78□□□□□ -0.04
SKA3-204ENST00000462482 PRAMEF13Q5VWM6 474 aa14.78□□□□□ -0.04
SKA3-204ENST00000462482 OVCH1Q7RTY7 1134 aa14.78□□□□□ -0.04
SKA3-204ENST00000462482 TAX1BP1Q86VP1 789 aa14.78□□□□□ -0.04
SKA3-204ENST00000462482 C2orf73Q8N5S3 287 aaPredicted RBP14.78□□□□□ -0.04
SKA3-204ENST00000462482 CCDC89Q8N998 374 aa14.78□□□□□ -0.04
SKA3-204ENST00000462482 OR2L8Q8NGY9 312 aa14.78□□□□□ -0.04
SKA3-204ENST00000462482 PEX13Q92968 403 aa14.78□□□□□ -0.04
SKA3-204ENST00000462482 RAD51AP1Q96B01 352 aa14.78□□□□□ -0.04
SKA3-204ENST00000462482 FOPNLQ96NB1 174 aa14.78□□□□□ -0.04
SKA3-204ENST00000462482 AGAP4Q96P64 663 aa14.78□□□□□ -0.04
SKA3-204ENST00000462482 PANX3Q96QZ0 392 aa14.78□□□□□ -0.04
SKA3-204ENST00000462482 BAG1Q99933 345 aaPredicted RBP14.78□□□□□ -0.04
SKA3-204ENST00000462482 WDR77Q9BQA1 342 aaPredicted RBP14.78□□□□□ -0.04
SKA3-204ENST00000462482 SELENOSQ9BQE4 189 aa14.78□□□□□ -0.04
SKA3-204ENST00000462482 EPS8L2Q9H6S3 715 aa14.78□□□□□ -0.04
SKA3-204ENST00000462482 ETNK1Q9HBU6 452 aa14.78□□□□□ -0.04
SKA3-204ENST00000462482 CUTCQ9NTM9 273 aa14.78□□□□□ -0.04
SKA3-204ENST00000462482 CATSPERZQ9NTU4 200 aa14.78□□□□□ -0.04
SKA3-204ENST00000462482 SLC2A6Q9UGQ3 507 aa14.78□□□□□ -0.04
SKA3-204ENST00000462482 FBXL4Q9UKA2 621 aa14.78□□□□□ -0.04
SKA3-204ENST00000462482 KLHL20Q9Y2M5 609 aa14.78□□□□□ -0.04
SKA3-204ENST00000462482 FAM169AQ9Y6X4 670 aa14.78□□□□□ -0.04
SKA3-204ENST00000462482 USP9XQ93008 2570 aaPredicted RBP14.78□□□□□ -0.04
SKA3-204ENST00000462482 RELNP78509 3460 aa14.77□□□□□ -0.04
SKA3-204ENST00000462482 PRMT5O14744 637 aaPredicted RBP14.77□□□□□ -0.05
SKA3-204ENST00000462482 DSCR3O14972 297 aa14.77□□□□□ -0.05
SKA3-204ENST00000462482 CNOT3O75175 753 aaKnown RBP14.77□□□□□ -0.05
SKA3-204ENST00000462482 SUN1O94901 812 aa14.77□□□□□ -0.05
SKA3-204ENST00000462482 CTSBP07858 339 aa14.77□□□□□ -0.05
SKA3-204ENST00000462482 PEBP1P30086 187 aaKnown RBP14.77□□□□□ -0.05
SKA3-204ENST00000462482 RBBP7Q16576 425 aa14.77□□□□□ -0.05
SKA3-204ENST00000462482 FIGLAQ6QHK4 219 aa14.77□□□□□ -0.05
SKA3-204ENST00000462482 Q6ZS92 163 aa14.77□□□□□ -0.05
SKA3-204ENST00000462482 FAM20CQ8IXL6 584 aa14.77□□□□□ -0.05
SKA3-204ENST00000462482 ATG4AQ8WYN0 398 aa14.77□□□□□ -0.05
SKA3-204ENST00000462482 ZUFSPQ96AP4 578 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms