RNA–Protein interactions for RNA: ENST00000462030.5

HPS3-204, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-204ENST00000462030 PDLIM5Q96HC4 596 aaKnown RBP18.02■□□□□ 0.48
HPS3-204ENST00000462030 EGFL8Q99944 293 aa18.02■□□□□ 0.48
HPS3-204ENST00000462030 GABARAPL1Q9H0R8 117 aa18.02■□□□□ 0.48
HPS3-204ENST00000462030 ABCB10Q9NRK6 738 aa18.02■□□□□ 0.48
HPS3-204ENST00000462030 AGO1Q9UL18 857 aaKnown RBP18.02■□□□□ 0.48
HPS3-204ENST00000462030 ARIH1Q9Y4X5 557 aaPredicted RBP18.02■□□□□ 0.48
HPS3-204ENST00000462030 SLC28A1O00337 649 aa18.01■□□□□ 0.47
HPS3-204ENST00000462030 PER2O15055 1255 aa18.01■□□□□ 0.47
HPS3-204ENST00000462030 RGS10O43665 173 aa18.01■□□□□ 0.47
HPS3-204ENST00000462030 ULK1O75385 1050 aa18.01■□□□□ 0.47
HPS3-204ENST00000462030 BCKDHAP12694 445 aa18.01■□□□□ 0.47
HPS3-204ENST00000462030 KRT20P35900 424 aa18.01■□□□□ 0.47
HPS3-204ENST00000462030 EIF2DP41214 584 aaKnown RBP18.01■□□□□ 0.47
HPS3-204ENST00000462030 ALDH7A1P49419 539 aaKnown RBP18.01■□□□□ 0.47
HPS3-204ENST00000462030 RPS24P62847 133 aaKnown RBP18.01■□□□□ 0.47
HPS3-204ENST00000462030 KEAP1Q14145 624 aa18.01■□□□□ 0.47
HPS3-204ENST00000462030 KDM4DQ6B0I6 523 aa18.01■□□□□ 0.47
HPS3-204ENST00000462030 GALNT10Q86SR1 603 aa18.01■□□□□ 0.47
HPS3-204ENST00000462030 HTRA1Q92743 480 aa18.01■□□□□ 0.47
HPS3-204ENST00000462030 FUBP3Q96I24 572 aaKnown RBP eCLIP18.01■□□□□ 0.47
HPS3-204ENST00000462030 PARK7Q99497 189 aaKnown RBP18.01■□□□□ 0.47
HPS3-204ENST00000462030 MAGEH1Q9H213 219 aa18.01■□□□□ 0.47
HPS3-204ENST00000462030 RASSF1Q9NS23 344 aa18.01■□□□□ 0.47
HPS3-204ENST00000462030 OLA1Q9NTK5 396 aaKnown RBP18.01■□□□□ 0.47
HPS3-204ENST00000462030 IL37Q9NZH6 218 aa18.01■□□□□ 0.47
HPS3-204ENST00000462030 OSGIN1Q9UJX0 560 aa18.01■□□□□ 0.47
HPS3-204ENST00000462030 PRAMEF12O95522 483 aa18.01■□□□□ 0.47
HPS3-204ENST00000462030 F11P03951 625 aa18.01■□□□□ 0.47
HPS3-204ENST00000462030 CD36P16671 472 aa18.01■□□□□ 0.47
HPS3-204ENST00000462030 CA5AP35218 305 aa18.01■□□□□ 0.47
HPS3-204ENST00000462030 THPOP40225 353 aa18.01■□□□□ 0.47
HPS3-204ENST00000462030 PPP5CP53041 499 aa18.01■□□□□ 0.47
HPS3-204ENST00000462030 DSC3Q14574 896 aa18.01■□□□□ 0.47
HPS3-204ENST00000462030 MAD2L1BPQ15013 274 aaPredicted RBP18.01■□□□□ 0.47
HPS3-204ENST00000462030 PRSS48Q7RTY5 328 aa18.01■□□□□ 0.47
HPS3-204ENST00000462030 SNX20Q7Z614 316 aa18.01■□□□□ 0.47
HPS3-204ENST00000462030 ARMC8Q8IUR7 673 aa18.01■□□□□ 0.47
HPS3-204ENST00000462030 PLD3Q8IV08 490 aa18.01■□□□□ 0.47
HPS3-204ENST00000462030 CIPCQ9C0C6 399 aa18.01■□□□□ 0.47
HPS3-204ENST00000462030 PRDM8Q9NQV8 689 aa18.01■□□□□ 0.47
HPS3-204ENST00000462030 TLR8Q9NR97 1041 aaKnown RBP18.01■□□□□ 0.47
HPS3-204ENST00000462030 DLGAP4Q9Y2H0 992 aa18.01■□□□□ 0.47
HPS3-204ENST00000462030 PCDHB5Q9Y5E4 795 aa18.01■□□□□ 0.47
HPS3-204ENST00000462030 NUP214P35658 2090 aaPredicted RBP18.01■□□□□ 0.47
HPS3-204ENST00000462030 hCG_2039718K7EN88 272 aa18■□□□□ 0.47
HPS3-204ENST00000462030 GLUD1P00367 558 aa18■□□□□ 0.47
HPS3-204ENST00000462030 IL1RNP18510 177 aa18■□□□□ 0.47
HPS3-204ENST00000462030 HOXA9P31269 272 aa18■□□□□ 0.47
HPS3-204ENST00000462030 CXCR4P61073 352 aa18■□□□□ 0.47
HPS3-204ENST00000462030 NFE2Q16621 373 aaPredicted RBP18■□□□□ 0.47
HPS3-204ENST00000462030 SERINC5Q86VE9 423 aa18■□□□□ 0.47
HPS3-204ENST00000462030 CCDC71Q8IV32 467 aaPredicted RBP18■□□□□ 0.47
HPS3-204ENST00000462030 TTC29Q8NA56 475 aaPredicted RBP18■□□□□ 0.47
HPS3-204ENST00000462030 MCFD2Q8NI22 146 aa18■□□□□ 0.47
HPS3-204ENST00000462030 TRIB2Q92519 343 aa18■□□□□ 0.47
HPS3-204ENST00000462030 BOCQ9BWV1 1114 aa18■□□□□ 0.47
HPS3-204ENST00000462030 WWOXQ9NZC7 414 aa18■□□□□ 0.47
HPS3-204ENST00000462030 OPTCQ9UBM4 332 aa18■□□□□ 0.47
HPS3-204ENST00000462030 NOD1Q9Y239 953 aa18■□□□□ 0.47
HPS3-204ENST00000462030 LOC730098B7Z3J9 87 aa18■□□□□ 0.47
HPS3-204ENST00000462030 MANBAO00462 879 aa18■□□□□ 0.47
HPS3-204ENST00000462030 ERN1O75460 977 aaKnown RBP18■□□□□ 0.47
HPS3-204ENST00000462030 OAZ2O95190 189 aa18■□□□□ 0.47
HPS3-204ENST00000462030 SERPINB1P30740 379 aa18■□□□□ 0.47
HPS3-204ENST00000462030 RCVRNP35243 200 aa18■□□□□ 0.47
HPS3-204ENST00000462030 ARPP19P56211 112 aa18■□□□□ 0.47
HPS3-204ENST00000462030 LRIF1Q5T3J3 769 aa18■□□□□ 0.47
HPS3-204ENST00000462030 DEPDC1Q5TB30 811 aa18■□□□□ 0.47
HPS3-204ENST00000462030 OR2T5Q6IEZ7 315 aa18■□□□□ 0.47
HPS3-204ENST00000462030 TRIM46Q7Z4K8 759 aa18■□□□□ 0.47
HPS3-204ENST00000462030 GALNT13Q8IUC8 556 aa18■□□□□ 0.47
HPS3-204ENST00000462030 OR2T29Q8NH02 315 aa18■□□□□ 0.47
HPS3-204ENST00000462030 EID2BQ96D98 161 aa18■□□□□ 0.47
HPS3-204ENST00000462030 ZHX1-C8orf76Q96EF9 292 aa18■□□□□ 0.47
HPS3-204ENST00000462030 ZBTB20Q9HC78 741 aaPredicted RBP18■□□□□ 0.47
HPS3-204ENST00000462030 PRG3Q9Y2Y8 225 aaPredicted RBP18■□□□□ 0.47
HPS3-204ENST00000462030 SCN10AQ9Y5Y9 1956 aa18■□□□□ 0.47
HPS3-204ENST00000462030 A0A096LPI6 279 aa17.99■□□□□ 0.47
HPS3-204ENST00000462030 EFCAB9A8MZ26 197 aa17.99■□□□□ 0.47
HPS3-204ENST00000462030 PTPN6P29350 595 aa17.99■□□□□ 0.47
HPS3-204ENST00000462030 RING1Q06587 406 aa17.99■□□□□ 0.47
HPS3-204ENST00000462030 PTRHD1Q6GMV3 140 aaKnown RBP17.99■□□□□ 0.47
HPS3-204ENST00000462030 MBOAT1Q6ZNC8 495 aa17.99■□□□□ 0.47
HPS3-204ENST00000462030 AHSA2Q719I0 299 aa17.99■□□□□ 0.47
HPS3-204ENST00000462030 LYSMD2Q8IV50 215 aa17.99■□□□□ 0.47
HPS3-204ENST00000462030 CARNMT1Q8N4J0 409 aa17.99■□□□□ 0.47
HPS3-204ENST00000462030 SVOPQ8N4V2 548 aa17.99■□□□□ 0.47
HPS3-204ENST00000462030 KCNH6Q9H252 994 aa17.99■□□□□ 0.47
HPS3-204ENST00000462030 SIAEQ9HAT2 523 aa17.99■□□□□ 0.47
HPS3-204ENST00000462030 THG1LQ9NWX6 298 aaKnown RBP17.99■□□□□ 0.47
HPS3-204ENST00000462030 AP3M1Q9Y2T2 418 aa17.99■□□□□ 0.47
HPS3-204ENST00000462030 HSPE1-MOB4S4R3N1 261 aa17.99■□□□□ 0.47
HPS3-204ENST00000462030 OR2A25A4D2G3 310 aa17.99■□□□□ 0.47
HPS3-204ENST00000462030 H3BNC9 293 aa17.99■□□□□ 0.47
HPS3-204ENST00000462030 H7C0S8 307 aa17.99■□□□□ 0.47
HPS3-204ENST00000462030 CBX4O00257 560 aa17.99■□□□□ 0.47
HPS3-204ENST00000462030 KDELR3O43731 214 aa17.99■□□□□ 0.47
HPS3-204ENST00000462030 UPK1BO75841 260 aa17.99■□□□□ 0.47
HPS3-204ENST00000462030 HOXB9P17482 250 aaPredicted RBP17.99■□□□□ 0.47
HPS3-204ENST00000462030 GSSP48637 474 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms