RNA–Protein interactions for RNA: ENST00000459895.1

COL18A1-206, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 3

Gene COL18A1, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-206ENST00000459895 PARD6BQ9BYG5 372 aa12.41□□□□□ -0.42
COL18A1-206ENST00000459895 PITPNM3Q9BZ71 974 aa12.41□□□□□ -0.42
COL18A1-206ENST00000459895 OR6C2Q9NZP2 312 aa12.41□□□□□ -0.42
COL18A1-206ENST00000459895 ZNF180Q9UJW8 692 aa12.41□□□□□ -0.42
COL18A1-206ENST00000459895 RAB21Q9UL25 225 aa12.41□□□□□ -0.42
COL18A1-206ENST00000459895 PDE10AQ9Y233 779 aa12.41□□□□□ -0.42
COL18A1-206ENST00000459895 IGHV5-51A0A0C4DH38 117 aa12.4□□□□□ -0.42
COL18A1-206ENST00000459895 A0A1W2PPV9 198 aa12.4□□□□□ -0.42
COL18A1-206ENST00000459895 PLD2O14939 933 aa12.4□□□□□ -0.42
COL18A1-206ENST00000459895 CCL4P13236 92 aa12.4□□□□□ -0.42
COL18A1-206ENST00000459895 CYP2A7P20853 494 aa12.4□□□□□ -0.42
COL18A1-206ENST00000459895 MAP4P27816 1152 aaKnown RBP12.4□□□□□ -0.42
COL18A1-206ENST00000459895 MSH2P43246 934 aa12.4□□□□□ -0.42
COL18A1-206ENST00000459895 SEPHS1P49903 392 aa12.4□□□□□ -0.42
COL18A1-206ENST00000459895 TBPL1P62380 186 aa12.4□□□□□ -0.42
COL18A1-206ENST00000459895 DLG1Q12959 904 aa12.4□□□□□ -0.42
COL18A1-206ENST00000459895 CSHL1Q14406 222 aa12.4□□□□□ -0.42
COL18A1-206ENST00000459895 TSNQ15631 228 aaKnown RBP12.4□□□□□ -0.42
COL18A1-206ENST00000459895 CYP2A13Q16696 494 aa12.4□□□□□ -0.42
COL18A1-206ENST00000459895 CACHD1Q5VU97 1274 aa12.4□□□□□ -0.42
COL18A1-206ENST00000459895 ANKS6Q68DC2 871 aa12.4□□□□□ -0.42
COL18A1-206ENST00000459895 TTC23LQ6PF05 361 aa12.4□□□□□ -0.42
COL18A1-206ENST00000459895 RAPH1Q70E73 1250 aa12.4□□□□□ -0.42
COL18A1-206ENST00000459895 RAB11FIP2Q7L804 512 aa12.4□□□□□ -0.42
COL18A1-206ENST00000459895 FAM129CQ86XR2 697 aa12.4□□□□□ -0.42
COL18A1-206ENST00000459895 FAM20CQ8IXL6 584 aa12.4□□□□□ -0.42
COL18A1-206ENST00000459895 CENPLQ8N0S6 344 aaPredicted RBP12.4□□□□□ -0.42
COL18A1-206ENST00000459895 NKAPQ8N5F7 415 aaKnown RBP12.4□□□□□ -0.42
COL18A1-206ENST00000459895 BMPERQ8N8U9 685 aa12.4□□□□□ -0.42
COL18A1-206ENST00000459895 WDR36Q8NI36 951 aaKnown RBP12.4□□□□□ -0.42
COL18A1-206ENST00000459895 HMGCLL1Q8TB92 370 aa12.4□□□□□ -0.42
COL18A1-206ENST00000459895 MAGEC3Q8TD91 643 aa12.4□□□□□ -0.42
COL18A1-206ENST00000459895 EPS8L3Q8TE67 593 aaKnown RBP12.4□□□□□ -0.42
COL18A1-206ENST00000459895 ZNF480Q8WV37 535 aa12.4□□□□□ -0.42
COL18A1-206ENST00000459895 PRR11Q96HE9 360 aaPredicted RBP12.4□□□□□ -0.42
COL18A1-206ENST00000459895 OR2A14Q96R47 310 aa12.4□□□□□ -0.42
COL18A1-206ENST00000459895 SLC12A9Q9BXP2 914 aa12.4□□□□□ -0.42
COL18A1-206ENST00000459895 DERL2Q9GZP9 239 aa12.4□□□□□ -0.42
COL18A1-206ENST00000459895 KLHL25Q9H0H3 589 aa12.4□□□□□ -0.42
COL18A1-206ENST00000459895 POLR1BQ9H9Y6 1135 aa12.4□□□□□ -0.42
COL18A1-206ENST00000459895 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.4□□□□□ -0.42
COL18A1-206ENST00000459895 STOX2Q9P2F5 926 aaPredicted RBP12.4□□□□□ -0.42
COL18A1-206ENST00000459895 PSMC3IPQ9P2W1 217 aaPredicted RBP12.4□□□□□ -0.42
COL18A1-206ENST00000459895 PISDQ9UG56 409 aa12.4□□□□□ -0.42
COL18A1-206ENST00000459895 IKBKGQ9Y6K9 419 aa12.4□□□□□ -0.42
COL18A1-206ENST00000459895 A0A0J9YY10 115 aa12.39□□□□□ -0.43
COL18A1-206ENST00000459895 SMIM23A6NLE4 172 aa12.39□□□□□ -0.43
COL18A1-206ENST00000459895 EFCAB7A8K855 629 aa12.39□□□□□ -0.43
COL18A1-206ENST00000459895 ISM1B1AKI9 464 aa12.39□□□□□ -0.43
COL18A1-206ENST00000459895 TRIM49D1C9J1S8 452 aa12.39□□□□□ -0.43
COL18A1-206ENST00000459895 TMX2-CTNND1H3BSU7 103 aa12.39□□□□□ -0.43
COL18A1-206ENST00000459895 SLC16A5O15375 505 aa12.39□□□□□ -0.43
COL18A1-206ENST00000459895 TOX3O15405 576 aaPredicted RBP12.39□□□□□ -0.43
COL18A1-206ENST00000459895 ZBTB14O43829 449 aa12.39□□□□□ -0.43
COL18A1-206ENST00000459895 NRP2O60462 931 aa12.39□□□□□ -0.43
COL18A1-206ENST00000459895 BRINP1O60477 761 aa12.39□□□□□ -0.43
COL18A1-206ENST00000459895 EBLN1P0CF75 366 aa12.39□□□□□ -0.43
COL18A1-206ENST00000459895 CCDC166P0CW27 439 aa12.39□□□□□ -0.43
COL18A1-206ENST00000459895 CD1DP15813 335 aa12.39□□□□□ -0.43
COL18A1-206ENST00000459895 ST6GAL1P15907 406 aa12.39□□□□□ -0.43
COL18A1-206ENST00000459895 CDH3P22223 829 aa12.39□□□□□ -0.43
COL18A1-206ENST00000459895 PRDX3P30048 256 aaKnown RBP12.39□□□□□ -0.43
COL18A1-206ENST00000459895 SERPINB9P50453 376 aa12.39□□□□□ -0.43
COL18A1-206ENST00000459895 PNLIPRP1P54315 467 aa12.39□□□□□ -0.43
COL18A1-206ENST00000459895 SH3BP2P78314 561 aa12.39□□□□□ -0.43
COL18A1-206ENST00000459895 EIF3IQ13347 325 aaKnown RBP12.39□□□□□ -0.43
COL18A1-206ENST00000459895 KCNAB1Q14722 419 aa12.39□□□□□ -0.43
COL18A1-206ENST00000459895 KIR2DS3Q14952 304 aa12.39□□□□□ -0.43
COL18A1-206ENST00000459895 OR4D1Q15615 310 aa12.39□□□□□ -0.43
COL18A1-206ENST00000459895 SLC5A12Q1EHB4 618 aa12.39□□□□□ -0.43
COL18A1-206ENST00000459895 TAF1BQ53T94 588 aaPredicted RBP12.39□□□□□ -0.43
COL18A1-206ENST00000459895 SUSD1Q6UWL2 747 aa12.39□□□□□ -0.43
COL18A1-206ENST00000459895 UNQ6494/PRO21346Q6UXR6 183 aa12.39□□□□□ -0.43
COL18A1-206ENST00000459895 ADAMTSL2Q86TH1 951 aa12.39□□□□□ -0.43
COL18A1-206ENST00000459895 RAB42Q8N4Z0 105 aa12.39□□□□□ -0.43
COL18A1-206ENST00000459895 C19orf47Q8N9M1 422 aaKnown RBP12.39□□□□□ -0.43
COL18A1-206ENST00000459895 AGBL5Q8NDL9 886 aa12.39□□□□□ -0.43
COL18A1-206ENST00000459895 OR2W6PQ8NHA6 318 aa12.39□□□□□ -0.43
COL18A1-206ENST00000459895 MDM1Q8TC05 714 aa12.39□□□□□ -0.43
COL18A1-206ENST00000459895 KCTD4Q8WVF5 259 aa12.39□□□□□ -0.43
COL18A1-206ENST00000459895 PTERQ96BW5 349 aa12.39□□□□□ -0.43
COL18A1-206ENST00000459895 GRAMD1AQ96CP6 724 aa12.39□□□□□ -0.43
COL18A1-206ENST00000459895 PDLIM5Q96HC4 596 aaKnown RBP12.39□□□□□ -0.43
COL18A1-206ENST00000459895 SLC41A2Q96JW4 573 aa12.39□□□□□ -0.43
COL18A1-206ENST00000459895 UBXN10Q96LJ8 280 aa12.39□□□□□ -0.43
COL18A1-206ENST00000459895 CMKLR1Q99788 373 aa12.39□□□□□ -0.43
COL18A1-206ENST00000459895 NRSN2Q9GZP1 204 aa12.39□□□□□ -0.43
COL18A1-206ENST00000459895 SYTL2Q9HCH5 934 aa12.39□□□□□ -0.43
COL18A1-206ENST00000459895 ASCL3Q9NQ33 180 aa12.39□□□□□ -0.43
COL18A1-206ENST00000459895 IGSF5Q9NSI5 407 aa12.39□□□□□ -0.43
COL18A1-206ENST00000459895 OCIAD1Q9NX40 245 aa12.39□□□□□ -0.43
COL18A1-206ENST00000459895 SOHLH2Q9NX45 425 aa12.39□□□□□ -0.43
COL18A1-206ENST00000459895 UTP6Q9NYH9 597 aaKnown RBP12.39□□□□□ -0.43
COL18A1-206ENST00000459895 SEMA5BQ9P283 1151 aa12.39□□□□□ -0.43
COL18A1-206ENST00000459895 FETUBQ9UGM5 382 aa12.39□□□□□ -0.43
COL18A1-206ENST00000459895 A0A087X1B8 175 aa12.38□□□□□ -0.43
COL18A1-206ENST00000459895 A0A096LPK6 155 aa12.38□□□□□ -0.43
COL18A1-206ENST00000459895 TRABD2BA6NFA1 517 aa12.38□□□□□ -0.43
COL18A1-206ENST00000459895 C1QTNF9BB2RNN3 333 aa12.38□□□□□ -0.43
COL18A1-206ENST00000459895 KRT38O76015 456 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms