RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 SYCE1Q8N0S2 351 aa20.71■□□□□ 0.91
CPNE1-220ENST00000458038 ASZ1Q8WWH4 475 aa20.71■□□□□ 0.91
CPNE1-220ENST00000458038 VPS50Q96JG6 964 aa20.71■□□□□ 0.91
CPNE1-220ENST00000458038 AGPAT4Q9NRZ5 378 aa20.71■□□□□ 0.91
CPNE1-220ENST00000458038 CCDC162PA2VCL2 907 aa20.7■□□□□ 0.9
CPNE1-220ENST00000458038 KRT86O43790 486 aa20.7■□□□□ 0.9
CPNE1-220ENST00000458038 FKBP9O95302 570 aa20.7■□□□□ 0.9
CPNE1-220ENST00000458038 LDLRP01130 860 aa20.7■□□□□ 0.9
CPNE1-220ENST00000458038 UMODP07911 640 aa20.7■□□□□ 0.9
CPNE1-220ENST00000458038 MMP11P24347 488 aa20.7■□□□□ 0.9
CPNE1-220ENST00000458038 PKLRP30613 574 aa20.7■□□□□ 0.9
CPNE1-220ENST00000458038 KLF1Q13351 362 aaPredicted RBP20.7■□□□□ 0.9
CPNE1-220ENST00000458038 ZC3H12BQ5HYM0 836 aaKnown RBP20.7■□□□□ 0.9
CPNE1-220ENST00000458038 CRB2Q5IJ48 1285 aa20.7■□□□□ 0.9
CPNE1-220ENST00000458038 TCTE1Q5JU00 501 aa20.7■□□□□ 0.9
CPNE1-220ENST00000458038 AFTPHQ6ULP2 937 aa20.7■□□□□ 0.9
CPNE1-220ENST00000458038 NLRP9Q7RTR0 991 aa20.7■□□□□ 0.9
CPNE1-220ENST00000458038 OVCH1Q7RTY7 1134 aa20.7■□□□□ 0.9
CPNE1-220ENST00000458038 MCATQ8IVS2 390 aaKnown RBP20.7■□□□□ 0.9
CPNE1-220ENST00000458038 SLC22A15Q8IZD6 547 aa20.7■□□□□ 0.9
CPNE1-220ENST00000458038 DNAAF3Q8N9W5 541 aa20.7■□□□□ 0.9
CPNE1-220ENST00000458038 SLC35B2Q8TB61 432 aa20.7■□□□□ 0.9
CPNE1-220ENST00000458038 MRFAP1L1Q96HT8 127 aa20.7■□□□□ 0.9
CPNE1-220ENST00000458038 C5orf34Q96MH7 638 aa20.7■□□□□ 0.9
CPNE1-220ENST00000458038 TMEM121Q9BTD3 319 aa20.7■□□□□ 0.9
CPNE1-220ENST00000458038 ENAMQ9NRM1 1142 aa20.7■□□□□ 0.9
CPNE1-220ENST00000458038 IL1RAPL1Q9NZN1 696 aa20.7■□□□□ 0.9
CPNE1-220ENST00000458038 ERRFI1Q9UJM3 462 aaPredicted RBP20.7■□□□□ 0.9
CPNE1-220ENST00000458038 SVILO95425 2214 aa20.7■□□□□ 0.9
CPNE1-220ENST00000458038 A0A1B0GX78 115 aa20.69■□□□□ 0.9
CPNE1-220ENST00000458038 A1L4Q6 167 aa20.69■□□□□ 0.9
CPNE1-220ENST00000458038 GRID2IPA4D2P6 1211 aa20.69■□□□□ 0.9
CPNE1-220ENST00000458038 SOWAHDA6NJG2 315 aa20.69■□□□□ 0.9
CPNE1-220ENST00000458038 CNOT3O75175 753 aaKnown RBP20.69■□□□□ 0.9
CPNE1-220ENST00000458038 S1PR4O95977 384 aa20.69■□□□□ 0.9
CPNE1-220ENST00000458038 RNF224P0DH78 156 aa20.69■□□□□ 0.9
CPNE1-220ENST00000458038 ALAS2P22557 587 aa20.69■□□□□ 0.9
CPNE1-220ENST00000458038 GCGRP47871 477 aa20.69■□□□□ 0.9
CPNE1-220ENST00000458038 IRAK1BP1Q5VVH5 260 aa20.69■□□□□ 0.9
CPNE1-220ENST00000458038 UNC5DQ6UXZ4 953 aa20.69■□□□□ 0.9
CPNE1-220ENST00000458038 TXLNBQ8N3L3 684 aa20.69■□□□□ 0.9
CPNE1-220ENST00000458038 PEX13Q92968 403 aa20.69■□□□□ 0.9
CPNE1-220ENST00000458038 HDAC10Q969S8 669 aa20.69■□□□□ 0.9
CPNE1-220ENST00000458038 RANBP9Q96S59 729 aa20.69■□□□□ 0.9
CPNE1-220ENST00000458038 CARD6Q9BX69 1037 aa20.69■□□□□ 0.9
CPNE1-220ENST00000458038 SLC26A1Q9H2B4 701 aa20.69■□□□□ 0.9
CPNE1-220ENST00000458038 MRM3Q9HC36 420 aaKnown RBP20.69■□□□□ 0.9
CPNE1-220ENST00000458038 PIH1D1Q9NWS0 290 aaKnown RBP20.69■□□□□ 0.9
CPNE1-220ENST00000458038 ZGRF1Q86YA3 2104 aa20.68■□□□□ 0.9
CPNE1-220ENST00000458038 OR51F1A6NGY5 319 aa20.68■□□□□ 0.9
CPNE1-220ENST00000458038 APOA4P06727 396 aa20.68■□□□□ 0.9
CPNE1-220ENST00000458038 MAGP20916 626 aa20.68■□□□□ 0.9
CPNE1-220ENST00000458038 CD9P21926 228 aa20.68■□□□□ 0.9
CPNE1-220ENST00000458038 ADRA1DP25100 572 aa20.68■□□□□ 0.9
CPNE1-220ENST00000458038 PEBP1P30086 187 aaKnown RBP20.68■□□□□ 0.9
CPNE1-220ENST00000458038 FDFT1P37268 417 aa20.68■□□□□ 0.9
CPNE1-220ENST00000458038 SLC9A5Q14940 896 aa20.68■□□□□ 0.9
CPNE1-220ENST00000458038 CCDC38Q502W7 563 aa20.68■□□□□ 0.9
CPNE1-220ENST00000458038 PRAMEF13Q5VWM6 474 aa20.68■□□□□ 0.9
CPNE1-220ENST00000458038 DCUN1D3Q8IWE4 304 aa20.68■□□□□ 0.9
CPNE1-220ENST00000458038 OR13J1Q8NGT2 312 aa20.68■□□□□ 0.9
CPNE1-220ENST00000458038 OR4L1Q8NH43 312 aa20.68■□□□□ 0.9
CPNE1-220ENST00000458038 WDR77Q9BQA1 342 aaPredicted RBP20.68■□□□□ 0.9
CPNE1-220ENST00000458038 RAB11FIP5Q9BXF6 653 aa20.68■□□□□ 0.9
CPNE1-220ENST00000458038 LACRTQ9GZZ8 138 aa20.68■□□□□ 0.9
CPNE1-220ENST00000458038 IMPACTQ9P2X3 320 aa20.68■□□□□ 0.9
CPNE1-220ENST00000458038 NXT1Q9UKK6 140 aaKnown RBP20.68■□□□□ 0.9
CPNE1-220ENST00000458038 PLAGL1Q9UM63 463 aa20.68■□□□□ 0.9
CPNE1-220ENST00000458038 PCDHGA10Q9Y5H3 936 aa20.68■□□□□ 0.9
CPNE1-220ENST00000458038 MRFAP1Q9Y605 127 aa20.68■□□□□ 0.9
CPNE1-220ENST00000458038 DSCR3O14972 297 aa20.67■□□□□ 0.9
CPNE1-220ENST00000458038 OR1I1O60431 355 aa20.67■□□□□ 0.9
CPNE1-220ENST00000458038 GPC4O75487 556 aa20.67■□□□□ 0.9
CPNE1-220ENST00000458038 SUN1O94901 812 aa20.67■□□□□ 0.9
CPNE1-220ENST00000458038 ITGA3P26006 1051 aa20.67■□□□□ 0.9
CPNE1-220ENST00000458038 GLRBP48167 497 aa20.67■□□□□ 0.9
CPNE1-220ENST00000458038 GDF10P55107 478 aa20.67■□□□□ 0.9
CPNE1-220ENST00000458038 ACVR1Q04771 509 aa20.67■□□□□ 0.9
CPNE1-220ENST00000458038 HSPA14Q0VDF9 509 aa20.67■□□□□ 0.9
CPNE1-220ENST00000458038 GRM7Q14831 915 aa20.67■□□□□ 0.9
CPNE1-220ENST00000458038 FAM214AQ32MH5 1076 aa20.67■□□□□ 0.9
CPNE1-220ENST00000458038 FASTKD1Q53R41 847 aaKnown RBP20.67■□□□□ 0.9
CPNE1-220ENST00000458038 AARS2Q5JTZ9 985 aaKnown RBP20.67■□□□□ 0.9
CPNE1-220ENST00000458038 TSTD2Q5T7W7 516 aa20.67■□□□□ 0.9
CPNE1-220ENST00000458038 TTC23LQ6PF05 361 aa20.67■□□□□ 0.9
CPNE1-220ENST00000458038 NAPRTQ6XQN6 538 aa20.67■□□□□ 0.9
CPNE1-220ENST00000458038 TTLL10Q6ZVT0 673 aa20.67■□□□□ 0.9
CPNE1-220ENST00000458038 OR52K1Q8NGK4 314 aa20.67■□□□□ 0.9
CPNE1-220ENST00000458038 OR2L8Q8NGY9 312 aa20.67■□□□□ 0.9
CPNE1-220ENST00000458038 PPP4R1Q8TF05 950 aa20.67■□□□□ 0.9
CPNE1-220ENST00000458038 UBE2Q2Q8WVN8 375 aa20.67■□□□□ 0.9
CPNE1-220ENST00000458038 ZUFSPQ96AP4 578 aa20.67■□□□□ 0.9
CPNE1-220ENST00000458038 FRMD8P1Q9BZ68 369 aaPredicted RBP20.67■□□□□ 0.9
CPNE1-220ENST00000458038 SLC22A11Q9NSA0 550 aa20.67■□□□□ 0.9
CPNE1-220ENST00000458038 CAMSAP3Q9P1Y5 1249 aaPredicted RBP20.67■□□□□ 0.9
CPNE1-220ENST00000458038 REXO2Q9Y3B8 237 aaKnown RBP20.67■□□□□ 0.9
CPNE1-220ENST00000458038 LRBAP50851 2863 aa20.67■□□□□ 0.9
CPNE1-220ENST00000458038 TARM1B6A8C7 271 aa20.66■□□□□ 0.9
CPNE1-220ENST00000458038 SLCO2B1O94956 709 aa20.66■□□□□ 0.9
CPNE1-220ENST00000458038 GOT2P00505 430 aaKnown RBP20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms