RNA–Protein interactions for RNA: ENST00000457924.2

UPF3AP2-201, Transcript of UPF3A pseudogene 2, humanhuman

BASIC

Gene UPF3AP2, Length 1,132 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP2-201ENST00000457924 ZNF140P52738 457 aaPredicted RBP13.79□□□□□ -0.2
UPF3AP2-201ENST00000457924 ARSFP54793 590 aa13.79□□□□□ -0.2
UPF3AP2-201ENST00000457924 PRPSAP1Q14558 356 aa13.79□□□□□ -0.2
UPF3AP2-201ENST00000457924 TAS2R42Q7RTR8 314 aa13.79□□□□□ -0.2
UPF3AP2-201ENST00000457924 LUZP1Q86V48 1076 aa13.79□□□□□ -0.2
UPF3AP2-201ENST00000457924 TMEM151BQ8IW70 566 aa13.79□□□□□ -0.2
UPF3AP2-201ENST00000457924 TBC1D21Q8IYX1 336 aa13.79□□□□□ -0.2
UPF3AP2-201ENST00000457924 FERMT1Q9BQL6 677 aa13.79□□□□□ -0.2
UPF3AP2-201ENST00000457924 GORASP1Q9BQQ3 440 aa13.79□□□□□ -0.2
UPF3AP2-201ENST00000457924 LHPPQ9H008 270 aa13.79□□□□□ -0.2
UPF3AP2-201ENST00000457924 WDR54Q9H977 334 aa13.79□□□□□ -0.2
UPF3AP2-201ENST00000457924 MRM3Q9HC36 420 aaKnown RBP13.79□□□□□ -0.2
UPF3AP2-201ENST00000457924 SLC22A11Q9NSA0 550 aa13.79□□□□□ -0.2
UPF3AP2-201ENST00000457924 OLAHQ9NV23 265 aa13.79□□□□□ -0.2
UPF3AP2-201ENST00000457924 ZNHIT6Q9NWK9 470 aaKnown RBP13.79□□□□□ -0.2
UPF3AP2-201ENST00000457924 SPHK1Q9NYA1 384 aa13.79□□□□□ -0.2
UPF3AP2-201ENST00000457924 EURLQ9NYK6 297 aa13.79□□□□□ -0.2
UPF3AP2-201ENST00000457924 TDRKHQ9Y2W6 561 aaKnown RBP13.79□□□□□ -0.2
UPF3AP2-201ENST00000457924 ANKRD17O75179 2603 aaKnown RBP13.79□□□□□ -0.2
UPF3AP2-201ENST00000457924 IGLV3-16A0A075B6K0 115 aa13.78□□□□□ -0.2
UPF3AP2-201ENST00000457924 A0A1B0GX78 115 aa13.78□□□□□ -0.2
UPF3AP2-201ENST00000457924 POM121CA8CG34 1229 aa13.78□□□□□ -0.2
UPF3AP2-201ENST00000457924 ISM1B1AKI9 464 aa13.78□□□□□ -0.2
UPF3AP2-201ENST00000457924 H7C0C1 242 aa13.78□□□□□ -0.2
UPF3AP2-201ENST00000457924 CCL22O00626 93 aa13.78□□□□□ -0.2
UPF3AP2-201ENST00000457924 SOCS6O14544 535 aa13.78□□□□□ -0.2
UPF3AP2-201ENST00000457924 LIN7AO14910 233 aaPredicted RBP13.78□□□□□ -0.2
UPF3AP2-201ENST00000457924 KDM1AO60341 852 aa13.78□□□□□ -0.2
UPF3AP2-201ENST00000457924 ALBP02768 609 aa13.78□□□□□ -0.2
UPF3AP2-201ENST00000457924 RBL1P28749 1068 aa13.78□□□□□ -0.2
UPF3AP2-201ENST00000457924 GRNP28799 593 aaKnown RBP13.78□□□□□ -0.2
UPF3AP2-201ENST00000457924 SOX11P35716 441 aa13.78□□□□□ -0.2
UPF3AP2-201ENST00000457924 ATP5OP48047 213 aa13.78□□□□□ -0.2
UPF3AP2-201ENST00000457924 CDKN1CP49918 316 aaPredicted RBP13.78□□□□□ -0.2
UPF3AP2-201ENST00000457924 WDR4P57081 412 aaKnown RBP13.78□□□□□ -0.2
UPF3AP2-201ENST00000457924 OLIG2Q13516 323 aa13.78□□□□□ -0.2
UPF3AP2-201ENST00000457924 SLC5A12Q1EHB4 618 aa13.78□□□□□ -0.2
UPF3AP2-201ENST00000457924 TUBB8Q3ZCM7 444 aa13.78□□□□□ -0.2
UPF3AP2-201ENST00000457924 TTLL10Q6ZVT0 673 aa13.78□□□□□ -0.2
UPF3AP2-201ENST00000457924 OVCH1Q7RTY7 1134 aa13.78□□□□□ -0.2
UPF3AP2-201ENST00000457924 SERPINA9Q86WD7 417 aa13.78□□□□□ -0.2
UPF3AP2-201ENST00000457924 CCDC50Q8IVM0 306 aa13.78□□□□□ -0.2
UPF3AP2-201ENST00000457924 CLDN19Q8N6F1 224 aa13.78□□□□□ -0.2
UPF3AP2-201ENST00000457924 BCORP1Q8N888 145 aa13.78□□□□□ -0.2
UPF3AP2-201ENST00000457924 OR8K1Q8NGG5 319 aa13.78□□□□□ -0.2
UPF3AP2-201ENST00000457924 FLVCR1-AS1Q8TAF5 88 aa13.78□□□□□ -0.2
UPF3AP2-201ENST00000457924 ITPKCQ96DU7 683 aa13.78□□□□□ -0.2
UPF3AP2-201ENST00000457924 THOC3Q96J01 351 aaKnown RBP13.78□□□□□ -0.2
UPF3AP2-201ENST00000457924 SLX1AQ9BQ83 275 aa13.78□□□□□ -0.2
UPF3AP2-201ENST00000457924 hCG_1818297A0A087WSY0 165 aa13.77□□□□□ -0.21
UPF3AP2-201ENST00000457924 TRBV5-4A0A0C4DH59 114 aa13.77□□□□□ -0.21
UPF3AP2-201ENST00000457924 GOLGA6L19H0YKK7 550 aa13.77□□□□□ -0.21
UPF3AP2-201ENST00000457924 JRKO75564 520 aa13.77□□□□□ -0.21
UPF3AP2-201ENST00000457924 AP2A2O94973 939 aa13.77□□□□□ -0.21
UPF3AP2-201ENST00000457924 ZRANB2O95218 330 aaKnown RBP eCLIP13.77□□□□□ -0.21
UPF3AP2-201ENST00000457924 OTUD4Q01804 1114 aaKnown RBP13.77□□□□□ -0.21
UPF3AP2-201ENST00000457924 MSLNQ13421 630 aaPredicted RBP13.77□□□□□ -0.21
UPF3AP2-201ENST00000457924 KIR2DS3Q14952 304 aa13.77□□□□□ -0.21
UPF3AP2-201ENST00000457924 RBBP7Q16576 425 aa13.77□□□□□ -0.21
UPF3AP2-201ENST00000457924 NKG7Q16617 165 aa13.77□□□□□ -0.21
UPF3AP2-201ENST00000457924 ZXDCQ2QGD7 858 aaPredicted RBP13.77□□□□□ -0.21
UPF3AP2-201ENST00000457924 C2CD3Q4AC94 2353 aa13.77□□□□□ -0.21
UPF3AP2-201ENST00000457924 CAVIN1Q6NZI2 390 aaKnown RBP13.77□□□□□ -0.21
UPF3AP2-201ENST00000457924 RPUSD3Q6P087 351 aaKnown RBP13.77□□□□□ -0.21
UPF3AP2-201ENST00000457924 MYO7BQ6PIF6 2116 aa13.77□□□□□ -0.21
UPF3AP2-201ENST00000457924 KIRREL2Q6UWL6 708 aa13.77□□□□□ -0.21
UPF3AP2-201ENST00000457924 ISLR2Q6UXK2 745 aa13.77□□□□□ -0.21
UPF3AP2-201ENST00000457924 LINC00696Q6ZRV3 163 aa13.77□□□□□ -0.21
UPF3AP2-201ENST00000457924 RCOR2Q8IZ40 523 aa13.77□□□□□ -0.21
UPF3AP2-201ENST00000457924 OR5K2Q8NHB8 316 aa13.77□□□□□ -0.21
UPF3AP2-201ENST00000457924 ELMO1Q92556 727 aa13.77□□□□□ -0.21
UPF3AP2-201ENST00000457924 RELTQ969Z4 430 aa13.77□□□□□ -0.21
UPF3AP2-201ENST00000457924 LRRC45Q96CN5 670 aa13.77□□□□□ -0.21
UPF3AP2-201ENST00000457924 CCDC42Q96M95 316 aa13.77□□□□□ -0.21
UPF3AP2-201ENST00000457924 LMF1Q96S06 567 aa13.77□□□□□ -0.21
UPF3AP2-201ENST00000457924 DNAJC7Q99615 494 aa13.77□□□□□ -0.21
UPF3AP2-201ENST00000457924 SLC26A1Q9H2B4 701 aa13.77□□□□□ -0.21
UPF3AP2-201ENST00000457924 ALG2Q9H553 416 aa13.77□□□□□ -0.21
UPF3AP2-201ENST00000457924 C10orf88Q9H8K7 445 aa13.77□□□□□ -0.21
UPF3AP2-201ENST00000457924 SPTLC3Q9NUV7 552 aa13.77□□□□□ -0.21
UPF3AP2-201ENST00000457924 IFNKQ9P0W0 207 aa13.77□□□□□ -0.21
UPF3AP2-201ENST00000457924 NXT1Q9UKK6 140 aaKnown RBP13.77□□□□□ -0.21
UPF3AP2-201ENST00000457924 HS3ST3B1Q9Y662 390 aa13.77□□□□□ -0.21
UPF3AP2-201ENST00000457924 CCDC78A2IDD5 438 aa13.76□□□□□ -0.21
UPF3AP2-201ENST00000457924 STK10O94804 968 aaKnown RBP13.76□□□□□ -0.21
UPF3AP2-201ENST00000457924 AP2A1O95782 977 aa13.76□□□□□ -0.21
UPF3AP2-201ENST00000457924 ONECUT2O95948 504 aa13.76□□□□□ -0.21
UPF3AP2-201ENST00000457924 FTH1P02794 183 aa13.76□□□□□ -0.21
UPF3AP2-201ENST00000457924 TPM3P06753 285 aa13.76□□□□□ -0.21
UPF3AP2-201ENST00000457924 TPBGLP0DKB5 382 aa13.76□□□□□ -0.21
UPF3AP2-201ENST00000457924 ITGAXP20702 1163 aa13.76□□□□□ -0.21
UPF3AP2-201ENST00000457924 PSMB4P28070 264 aa13.76□□□□□ -0.21
UPF3AP2-201ENST00000457924 ACADLP28330 430 aa13.76□□□□□ -0.21
UPF3AP2-201ENST00000457924 DHX9Q08211 1270 aaKnown RBP13.76□□□□□ -0.21
UPF3AP2-201ENST00000457924 MFAP5Q13361 173 aa13.76□□□□□ -0.21
UPF3AP2-201ENST00000457924 ART3Q13508 389 aa13.76□□□□□ -0.21
UPF3AP2-201ENST00000457924 BRD3Q15059 726 aa13.76□□□□□ -0.21
UPF3AP2-201ENST00000457924 SYTL3Q4VX76 610 aa13.76□□□□□ -0.21
UPF3AP2-201ENST00000457924 ANKRD20A2Q5SQ80 823 aa13.76□□□□□ -0.21
UPF3AP2-201ENST00000457924 CCDC181Q5TID7 509 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms