RNA–Protein interactions for RNA: ENST00000453954.6

TCF3-204, Transcript of transcription factor 3, humanhuman

TSL 5 BASIC

Gene TCF3, Length 3,585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-204ENST00000453954 ZIM2Q9NZV7 527 aa16.89■□□□□ 0.3
TCF3-204ENST00000453954 GTF2IRD1Q9UHL9 959 aa16.89■□□□□ 0.3
TCF3-204ENST00000453954 CPNE3O75131 537 aaKnown RBP16.89■□□□□ 0.29
TCF3-204ENST00000453954 CYP4F8P98187 520 aa16.89■□□□□ 0.29
TCF3-204ENST00000453954 LRRC73Q5JTD7 316 aa16.89■□□□□ 0.29
TCF3-204ENST00000453954 UBXN11Q5T124 520 aa16.89■□□□□ 0.29
TCF3-204ENST00000453954 ZNF641Q96N77 438 aaPredicted RBP16.89■□□□□ 0.29
TCF3-204ENST00000453954 IL4I1Q96RQ9 567 aa16.89■□□□□ 0.29
TCF3-204ENST00000453954 RPRD1BQ9NQG5 326 aaKnown RBP16.89■□□□□ 0.29
TCF3-204ENST00000453954 SNTG1Q9NSN8 517 aa16.89■□□□□ 0.29
TCF3-204ENST00000453954 RHCGQ9UBD6 479 aa16.89■□□□□ 0.29
TCF3-204ENST00000453954 KPNA5O15131 536 aa16.89■□□□□ 0.29
TCF3-204ENST00000453954 PRSS36Q5K4E3 855 aa16.89■□□□□ 0.29
TCF3-204ENST00000453954 NEK5Q6P3R8 708 aa16.89■□□□□ 0.29
TCF3-204ENST00000453954 CXCL17Q6UXB2 119 aa16.89■□□□□ 0.29
TCF3-204ENST00000453954 LYSMD2Q8IV50 215 aa16.89■□□□□ 0.29
TCF3-204ENST00000453954 NLGN4XQ8N0W4 816 aa16.89■□□□□ 0.29
TCF3-204ENST00000453954 MMP28Q9H239 520 aa16.89■□□□□ 0.29
TCF3-204ENST00000453954 RAD18Q9NS91 495 aa16.89■□□□□ 0.29
TCF3-204ENST00000453954 ARL15Q9NXU5 204 aa16.89■□□□□ 0.29
TCF3-204ENST00000453954 ANKRD34BA5PLL1 514 aa16.88■□□□□ 0.29
TCF3-204ENST00000453954 EFCAB10A6NFE3 127 aa16.88■□□□□ 0.29
TCF3-204ENST00000453954 GABRDO14764 452 aa16.88■□□□□ 0.29
TCF3-204ENST00000453954 ZW10O43264 779 aa16.88■□□□□ 0.29
TCF3-204ENST00000453954 TLL1O43897 1013 aa16.88■□□□□ 0.29
TCF3-204ENST00000453954 KCNK2O95069 426 aa16.88■□□□□ 0.29
TCF3-204ENST00000453954 SNAI1O95863 264 aaPredicted RBP16.88■□□□□ 0.29
TCF3-204ENST00000453954 CD52P31358 61 aa16.88■□□□□ 0.29
TCF3-204ENST00000453954 THPOP40225 353 aa16.88■□□□□ 0.29
TCF3-204ENST00000453954 SLC26A3P40879 764 aa16.88■□□□□ 0.29
TCF3-204ENST00000453954 LRIT3Q3SXY7 679 aa16.88■□□□□ 0.29
TCF3-204ENST00000453954 MS4A13Q5J8X5 152 aa16.88■□□□□ 0.29
TCF3-204ENST00000453954 GALNT12Q8IXK2 581 aa16.88■□□□□ 0.29
TCF3-204ENST00000453954 RGL4Q8IZJ4 473 aa16.88■□□□□ 0.29
TCF3-204ENST00000453954 VANGL1Q8TAA9 524 aaPredicted RBP16.88■□□□□ 0.29
TCF3-204ENST00000453954 GFM1Q96RP9 751 aaKnown RBP16.88■□□□□ 0.29
TCF3-204ENST00000453954 MUC13Q9H3R2 512 aa16.88■□□□□ 0.29
TCF3-204ENST00000453954 C8orf4Q9NR00 106 aa16.88■□□□□ 0.29
TCF3-204ENST00000453954 GPRC5BQ9NZH0 403 aa16.88■□□□□ 0.29
TCF3-204ENST00000453954 PTCH2Q9Y6C5 1203 aa16.88■□□□□ 0.29
TCF3-204ENST00000453954 LCHNA4D1U4 455 aa16.88■□□□□ 0.29
TCF3-204ENST00000453954 TRIM64CA6NLI5 447 aa16.88■□□□□ 0.29
TCF3-204ENST00000453954 UPK1BO75841 260 aa16.88■□□□□ 0.29
TCF3-204ENST00000453954 SNX4O95219 450 aa16.88■□□□□ 0.29
TCF3-204ENST00000453954 FGF1P05230 155 aa16.88■□□□□ 0.29
TCF3-204ENST00000453954 GKP32189 559 aa16.88■□□□□ 0.29
TCF3-204ENST00000453954 CTSKP43235 329 aa16.88■□□□□ 0.29
TCF3-204ENST00000453954 GALNT1Q10472 559 aaPredicted RBP16.88■□□□□ 0.29
TCF3-204ENST00000453954 PPP2R2DQ66LE6 453 aa16.88■□□□□ 0.29
TCF3-204ENST00000453954 OR2T5Q6IEZ7 315 aa16.88■□□□□ 0.29
TCF3-204ENST00000453954 FAM180BQ6P0A1 224 aa16.88■□□□□ 0.29
TCF3-204ENST00000453954 MSANTD2Q6P1R3 559 aa16.88■□□□□ 0.29
TCF3-204ENST00000453954 SCD5Q86SK9 330 aa16.88■□□□□ 0.29
TCF3-204ENST00000453954 ZNF605Q86T29 641 aa16.88■□□□□ 0.29
TCF3-204ENST00000453954 RIMKLAQ8IXN7 391 aa16.88■□□□□ 0.29
TCF3-204ENST00000453954 METTL4Q8N3J2 472 aa16.88■□□□□ 0.29
TCF3-204ENST00000453954 OR2T29Q8NH02 315 aa16.88■□□□□ 0.29
TCF3-204ENST00000453954 RHOXF1Q8NHV9 184 aa16.88■□□□□ 0.29
TCF3-204ENST00000453954 TRNT1Q96Q11 434 aaKnown RBP16.88■□□□□ 0.29
TCF3-204ENST00000453954 BOCQ9BWV1 1114 aa16.88■□□□□ 0.29
TCF3-204ENST00000453954 CRLS1Q9UJA2 301 aa16.88■□□□□ 0.29
TCF3-204ENST00000453954 B3GNT3Q9Y2A9 372 aa16.88■□□□□ 0.29
TCF3-204ENST00000453954 C17orf102A2RUQ5 167 aa16.88■□□□□ 0.29
TCF3-204ENST00000453954 FFAR2O15552 330 aa16.88■□□□□ 0.29
TCF3-204ENST00000453954 APOL3O95236 402 aa16.88■□□□□ 0.29
TCF3-204ENST00000453954 SLC25A14O95258 325 aaPredicted RBP16.88■□□□□ 0.29
TCF3-204ENST00000453954 CKMT1AP12532 417 aa16.88■□□□□ 0.29
TCF3-204ENST00000453954 ITIH1P19827 911 aa16.88■□□□□ 0.29
TCF3-204ENST00000453954 HOXD11P31277 338 aaPredicted RBP16.88■□□□□ 0.29
TCF3-204ENST00000453954 SSTR4P31391 388 aa16.88■□□□□ 0.29
TCF3-204ENST00000453954 BOP1Q14137 746 aaKnown RBP16.88■□□□□ 0.29
TCF3-204ENST00000453954 ARMCX4Q5H9R4 360 aa16.88■□□□□ 0.29
TCF3-204ENST00000453954 GNASQ5JWF2 1037 aa16.88■□□□□ 0.29
TCF3-204ENST00000453954 ATXN7L2Q5T6C5 722 aaPredicted RBP16.88■□□□□ 0.29
TCF3-204ENST00000453954 ZNF691Q5VV52 312 aa16.88■□□□□ 0.29
TCF3-204ENST00000453954 ATP6V0D2Q8N8Y2 350 aa16.88■□□□□ 0.29
TCF3-204ENST00000453954 DTX3Q8N9I9 347 aa16.88■□□□□ 0.29
TCF3-204ENST00000453954 PYURFQ96I23 114 aa16.88■□□□□ 0.29
TCF3-204ENST00000453954 PPP3R2Q96LZ3 170 aa16.88■□□□□ 0.29
TCF3-204ENST00000453954 IRF2BPLQ9H1B7 796 aa16.88■□□□□ 0.29
TCF3-204ENST00000453954 ACOT13Q9NPJ3 140 aa16.88■□□□□ 0.29
TCF3-204ENST00000453954 LTBP1Q14766 1721 aa16.87■□□□□ 0.29
TCF3-204ENST00000453954 SYNDIG1LA6NDD5 238 aa16.87■□□□□ 0.29
TCF3-204ENST00000453954 H3BM21 787 aa16.87■□□□□ 0.29
TCF3-204ENST00000453954 OTCP00480 354 aa16.87■□□□□ 0.29
TCF3-204ENST00000453954 C7P10643 843 aa16.87■□□□□ 0.29
TCF3-204ENST00000453954 CDKN2CP42773 168 aa16.87■□□□□ 0.29
TCF3-204ENST00000453954 TGM4P49221 684 aa16.87■□□□□ 0.29
TCF3-204ENST00000453954 GANABQ14697 944 aaKnown RBP16.87■□□□□ 0.29
TCF3-204ENST00000453954 BRMS1LQ5PSV4 323 aa16.87■□□□□ 0.29
TCF3-204ENST00000453954 USP43Q70EL4 1123 aa16.87■□□□□ 0.29
TCF3-204ENST00000453954 TAGAPQ8N103 731 aa16.87■□□□□ 0.29
TCF3-204ENST00000453954 SVOPLQ8N434 492 aa16.87■□□□□ 0.29
TCF3-204ENST00000453954 MFSD4AQ8N468 514 aa16.87■□□□□ 0.29
TCF3-204ENST00000453954 KLHDC9Q8NEP7 349 aa16.87■□□□□ 0.29
TCF3-204ENST00000453954 CENPOQ9BU64 300 aa16.87■□□□□ 0.29
TCF3-204ENST00000453954 TNFRSF21O75509 655 aa16.87■□□□□ 0.29
TCF3-204ENST00000453954 TACR1P25103 407 aa16.87■□□□□ 0.29
TCF3-204ENST00000453954 PSEN2P49810 448 aa16.87■□□□□ 0.29
TCF3-204ENST00000453954 PPP2R2BQ00005 443 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms