RNA–Protein interactions for RNA: ENST00000453858.1

SBDSP1-204, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

BASIC

Gene SBDSP1, Length 737 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-204ENST00000453858 MTMR6Q9Y217 621 aa5.03□□□□□ -1.6
SBDSP1-204ENST00000453858 PADI2Q9Y2J8 665 aa5.03□□□□□ -1.6
SBDSP1-204ENST00000453858 MFHAS1Q9Y4C4 1052 aa5.03□□□□□ -1.6
SBDSP1-204ENST00000453858 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.03□□□□□ -1.6
SBDSP1-204ENST00000453858 YLPM1P49750 1951 aaKnown RBP5.02□□□□□ -1.61
SBDSP1-204ENST00000453858 UBA6A0AVT1 1052 aaPredicted RBP5.02□□□□□ -1.61
SBDSP1-204ENST00000453858 TSPAN11A1L157 253 aa5.02□□□□□ -1.61
SBDSP1-204ENST00000453858 DYTNA2CJ06 578 aa5.02□□□□□ -1.61
SBDSP1-204ENST00000453858 SLC9B1P1A6NJY1 282 aa5.02□□□□□ -1.61
SBDSP1-204ENST00000453858 RASGRF2O14827 1237 aa5.02□□□□□ -1.61
SBDSP1-204ENST00000453858 XPO1O14980 1071 aaKnown RBP5.02□□□□□ -1.61
SBDSP1-204ENST00000453858 WDPCPO95876 746 aa5.02□□□□□ -1.61
SBDSP1-204ENST00000453858 F10P00742 488 aa5.02□□□□□ -1.61
SBDSP1-204ENST00000453858 ASS1P00966 412 aaKnown RBP5.02□□□□□ -1.61
SBDSP1-204ENST00000453858 PI3P19957 117 aa5.02□□□□□ -1.61
SBDSP1-204ENST00000453858 MMP11P24347 488 aa5.02□□□□□ -1.61
SBDSP1-204ENST00000453858 PEX19P40855 299 aa5.02□□□□□ -1.61
SBDSP1-204ENST00000453858 CAPZBP47756 277 aa5.02□□□□□ -1.61
SBDSP1-204ENST00000453858 CASP4P49662 377 aa5.02□□□□□ -1.61
SBDSP1-204ENST00000453858 TOB1P50616 345 aaPredicted RBP5.02□□□□□ -1.61
SBDSP1-204ENST00000453858 ARSEP51690 589 aa5.02□□□□□ -1.61
SBDSP1-204ENST00000453858 CDH4P55283 916 aa5.02□□□□□ -1.61
SBDSP1-204ENST00000453858 NUP107P57740 925 aa5.02□□□□□ -1.61
SBDSP1-204ENST00000453858 HSD11B2P80365 405 aa5.02□□□□□ -1.61
SBDSP1-204ENST00000453858 ELP6Q0PNE2 266 aa5.02□□□□□ -1.61
SBDSP1-204ENST00000453858 RALGDSQ12967 914 aa5.02□□□□□ -1.61
SBDSP1-204ENST00000453858 STILQ15468 1287 aa5.02□□□□□ -1.61
SBDSP1-204ENST00000453858 ZRSR1Q15695 479 aaKnown RBP5.02□□□□□ -1.61
SBDSP1-204ENST00000453858 SNRNP35Q16560 246 aaKnown RBP5.02□□□□□ -1.61
SBDSP1-204ENST00000453858 CYP2A13Q16696 494 aa5.02□□□□□ -1.61
SBDSP1-204ENST00000453858 UGP2Q16851 508 aa5.02□□□□□ -1.61
SBDSP1-204ENST00000453858 SGSM1Q2NKQ1 1148 aa5.02□□□□□ -1.61
SBDSP1-204ENST00000453858 RABGAP1LQ5R372 815 aa5.02□□□□□ -1.61
SBDSP1-204ENST00000453858 C6orf52Q5T4I8 152 aa5.02□□□□□ -1.61
SBDSP1-204ENST00000453858 LIPNQ5VXI9 398 aa5.02□□□□□ -1.61
SBDSP1-204ENST00000453858 SYPL2Q5VXT5 272 aa5.02□□□□□ -1.61
SBDSP1-204ENST00000453858 AFMIDQ63HM1 303 aa5.02□□□□□ -1.61
SBDSP1-204ENST00000453858 SPOPLQ6IQ16 392 aa5.02□□□□□ -1.61
SBDSP1-204ENST00000453858 SETD3Q86TU7 594 aaPredicted RBP5.02□□□□□ -1.61
SBDSP1-204ENST00000453858 TAC4Q86UU9 113 aa5.02□□□□□ -1.61
SBDSP1-204ENST00000453858 PAQR7Q86WK9 346 aa5.02□□□□□ -1.61
SBDSP1-204ENST00000453858 KMT5CQ86Y97 462 aa5.02□□□□□ -1.61
SBDSP1-204ENST00000453858 C3orf56Q8N813 242 aa5.02□□□□□ -1.61
SBDSP1-204ENST00000453858 ANKRD20A12PQ8NF67 263 aa5.02□□□□□ -1.61
SBDSP1-204ENST00000453858 OR7D4Q8NG98 312 aa5.02□□□□□ -1.61
SBDSP1-204ENST00000453858 HCAR2Q8TDS4 363 aa5.02□□□□□ -1.61
SBDSP1-204ENST00000453858 CLEC4CQ8WTT0 213 aa5.02□□□□□ -1.61
SBDSP1-204ENST00000453858 NOC3LQ8WTT2 800 aaKnown RBP5.02□□□□□ -1.61
SBDSP1-204ENST00000453858 IRGQQ8WZA9 623 aa5.02□□□□□ -1.61
SBDSP1-204ENST00000453858 FOXRED1Q96CU9 486 aaPredicted RBP5.02□□□□□ -1.61
SBDSP1-204ENST00000453858 SERPINB11Q96P15 392 aa5.02□□□□□ -1.61
SBDSP1-204ENST00000453858 PLEKHG4BQ96PX9 1271 aa5.02□□□□□ -1.61
SBDSP1-204ENST00000453858 MESP1Q9BRJ9 268 aa5.02□□□□□ -1.61
SBDSP1-204ENST00000453858 REG4Q9BYZ8 158 aa5.02□□□□□ -1.61
SBDSP1-204ENST00000453858 ZMAT4Q9H898 229 aa5.02□□□□□ -1.61
SBDSP1-204ENST00000453858 APOBEC3GQ9HC16 384 aaKnown RBP5.02□□□□□ -1.61
SBDSP1-204ENST00000453858 SLC39A2Q9NP94 309 aa5.02□□□□□ -1.61
SBDSP1-204ENST00000453858 H2AFY2Q9P0M6 372 aaPredicted RBP5.02□□□□□ -1.61
SBDSP1-204ENST00000453858 ZNF624Q9P2J8 865 aaPredicted RBP5.02□□□□□ -1.61
SBDSP1-204ENST00000453858 RCAN3Q9UKA8 241 aa5.02□□□□□ -1.61
SBDSP1-204ENST00000453858 HS3ST3B1Q9Y662 390 aa5.02□□□□□ -1.61
SBDSP1-204ENST00000453858 DSCAMO60469 2012 aa5.02□□□□□ -1.61
SBDSP1-204ENST00000453858 ABCA13Q86UQ4 5058 aa5.02□□□□□ -1.61
SBDSP1-204ENST00000453858 MALRD1Q5VYJ5 2156 aa5.01□□□□□ -1.61
SBDSP1-204ENST00000453858 KIR2DS5A0A0G2JLQ3 304 aa5.01□□□□□ -1.61
SBDSP1-204ENST00000453858 A0A0G2JNG1 304 aa5.01□□□□□ -1.61
SBDSP1-204ENST00000453858 CXorf51AA0A1B0GTR3 108 aa5.01□□□□□ -1.61
SBDSP1-204ENST00000453858 CLCA1A8K7I4 914 aa5.01□□□□□ -1.61
SBDSP1-204ENST00000453858 NPIPB6E9PJ23 425 aa5.01□□□□□ -1.61
SBDSP1-204ENST00000453858 FAM227AF5H4B4 570 aa5.01□□□□□ -1.61
SBDSP1-204ENST00000453858 KIR2DS3K7RE56 304 aa5.01□□□□□ -1.61
SBDSP1-204ENST00000453858 MTA2O94776 668 aa5.01□□□□□ -1.61
SBDSP1-204ENST00000453858 MPIG6BO95866 241 aa5.01□□□□□ -1.61
SBDSP1-204ENST00000453858 GSRP00390 522 aa5.01□□□□□ -1.61
SBDSP1-204ENST00000453858 STATHP02808 62 aa5.01□□□□□ -1.61
SBDSP1-204ENST00000453858 CBSLP0DN79 551 aa5.01□□□□□ -1.61
SBDSP1-204ENST00000453858 XRCC1P18887 633 aaPredicted RBP5.01□□□□□ -1.61
SBDSP1-204ENST00000453858 PTX3P26022 381 aaPredicted RBP5.01□□□□□ -1.61
SBDSP1-204ENST00000453858 APEX1P27695 318 aaKnown RBP5.01□□□□□ -1.61
SBDSP1-204ENST00000453858 CBSP35520 551 aa5.01□□□□□ -1.61
SBDSP1-204ENST00000453858 FOLR3P41439 243 aa5.01□□□□□ -1.61
SBDSP1-204ENST00000453858 PTH2RP49190 550 aa5.01□□□□□ -1.61
SBDSP1-204ENST00000453858 NR1H2P55055 460 aa5.01□□□□□ -1.61
SBDSP1-204ENST00000453858 PITX1P78337 314 aaPredicted RBP5.01□□□□□ -1.61
SBDSP1-204ENST00000453858 CDK3Q00526 305 aa5.01□□□□□ -1.61
SBDSP1-204ENST00000453858 TAP2Q03519 686 aa5.01□□□□□ -1.61
SBDSP1-204ENST00000453858 KIR2DS5Q14953 304 aa5.01□□□□□ -1.61
SBDSP1-204ENST00000453858 KRTAP19-4Q3LI73 84 aa5.01□□□□□ -1.61
SBDSP1-204ENST00000453858 ZFYVE27Q5T4F4 411 aa5.01□□□□□ -1.61
SBDSP1-204ENST00000453858 TCERG1LQ5VWI1 586 aa5.01□□□□□ -1.61
SBDSP1-204ENST00000453858 MLIPQ5VWP3 458 aa5.01□□□□□ -1.61
SBDSP1-204ENST00000453858 RETSATQ6NUM9 610 aa5.01□□□□□ -1.61
SBDSP1-204ENST00000453858 CPLX2Q6PUV4 134 aaKnown RBP5.01□□□□□ -1.61
SBDSP1-204ENST00000453858 BLOC1S2Q6QNY1 142 aa5.01□□□□□ -1.61
SBDSP1-204ENST00000453858 ESPNLQ6ZVH7 1005 aa5.01□□□□□ -1.61
SBDSP1-204ENST00000453858 BEND5Q7L4P6 421 aa5.01□□□□□ -1.61
SBDSP1-204ENST00000453858 CILP2Q8IUL8 1156 aa5.01□□□□□ -1.61
SBDSP1-204ENST00000453858 GHDCQ8N2G8 530 aa5.01□□□□□ -1.61
SBDSP1-204ENST00000453858 GUF1Q8N442 669 aaKnown RBP5.01□□□□□ -1.61
SBDSP1-204ENST00000453858 SLC4A11Q8NBS3 891 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms