RNA–Protein interactions for RNA: ENST00000449954.1

LINC01961-201, Transcript of long intergenic non-protein coding RNA 1961, humanhuman

TSL 5 BASIC

Gene LINC01961, Length 745 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01961-201ENST00000449954 EREGO14944 169 aa7.52□□□□□ -1.21
LINC01961-201ENST00000449954 SPRY1O43609 319 aaPredicted RBP7.52□□□□□ -1.21
LINC01961-201ENST00000449954 GOSR1O95249 250 aa7.52□□□□□ -1.21
LINC01961-201ENST00000449954 CD53P19397 219 aa7.52□□□□□ -1.21
LINC01961-201ENST00000449954 EEF1DP29692 281 aaKnown RBP7.52□□□□□ -1.21
LINC01961-201ENST00000449954 PRCPP42785 496 aa7.52□□□□□ -1.21
LINC01961-201ENST00000449954 PMS1P54277 932 aaKnown RBP7.52□□□□□ -1.21
LINC01961-201ENST00000449954 ARSFP54793 590 aa7.52□□□□□ -1.21
LINC01961-201ENST00000449954 DLX5P56178 289 aa7.52□□□□□ -1.21
LINC01961-201ENST00000449954 RPL26P61254 145 aaKnown RBP7.52□□□□□ -1.21
LINC01961-201ENST00000449954 GTF2H3Q13889 308 aa7.52□□□□□ -1.21
LINC01961-201ENST00000449954 FLYWCH1Q4VC44 716 aa7.52□□□□□ -1.21
LINC01961-201ENST00000449954 C2CD6Q53TS8 623 aa7.52□□□□□ -1.21
LINC01961-201ENST00000449954 TIGD7Q6NT04 549 aaPredicted RBP7.52□□□□□ -1.21
LINC01961-201ENST00000449954 TRIM65Q6PJ69 517 aa7.52□□□□□ -1.21
LINC01961-201ENST00000449954 ARHGAP36Q6ZRI8 547 aa7.52□□□□□ -1.21
LINC01961-201ENST00000449954 NDUFAF7Q7L592 441 aa7.52□□□□□ -1.21
LINC01961-201ENST00000449954 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.52□□□□□ -1.21
LINC01961-201ENST00000449954 AMZ2Q86W34 360 aa7.52□□□□□ -1.21
LINC01961-201ENST00000449954 ARHGAP12Q8IWW6 846 aa7.52□□□□□ -1.21
LINC01961-201ENST00000449954 TRAM1L1Q8N609 369 aa7.52□□□□□ -1.21
LINC01961-201ENST00000449954 ZNF655Q8N720 491 aaPredicted RBP7.52□□□□□ -1.21
LINC01961-201ENST00000449954 C19orf47Q8N9M1 422 aaKnown RBP7.52□□□□□ -1.21
LINC01961-201ENST00000449954 TMEM178AQ8NBL3 297 aa7.52□□□□□ -1.21
LINC01961-201ENST00000449954 FAM222BQ8WU58 562 aa7.52□□□□□ -1.21
LINC01961-201ENST00000449954 SLC20A1Q8WUM9 679 aa7.52□□□□□ -1.21
LINC01961-201ENST00000449954 TBRG4Q969Z0 631 aaKnown RBP eCLIP7.52□□□□□ -1.21
LINC01961-201ENST00000449954 EIF3CQ99613 913 aaKnown RBP7.52□□□□□ -1.21
LINC01961-201ENST00000449954 CRB3Q9BUF7 120 aa7.52□□□□□ -1.21
LINC01961-201ENST00000449954 SOX17Q9H6I2 414 aaPredicted RBP7.52□□□□□ -1.21
LINC01961-201ENST00000449954 RAD18Q9NS91 495 aa7.52□□□□□ -1.21
LINC01961-201ENST00000449954 RIC8BQ9NVN3 520 aa7.52□□□□□ -1.21
LINC01961-201ENST00000449954 IRAK4Q9NWZ3 460 aa7.52□□□□□ -1.21
LINC01961-201ENST00000449954 CRIM1Q9NZV1 1036 aa7.52□□□□□ -1.21
LINC01961-201ENST00000449954 FOXD3Q9UJU5 478 aaPredicted RBP7.52□□□□□ -1.21
LINC01961-201ENST00000449954 FZD10Q9ULW2 581 aa7.52□□□□□ -1.21
LINC01961-201ENST00000449954 PSMD13Q9UNM6 376 aa7.52□□□□□ -1.21
LINC01961-201ENST00000449954 RPL26L1Q9UNX3 145 aaKnown RBP7.52□□□□□ -1.21
LINC01961-201ENST00000449954 COLEC10Q9Y6Z7 277 aa7.52□□□□□ -1.21
LINC01961-201ENST00000449954 NOTCH1P46531 2555 aa7.51□□□□□ -1.21
LINC01961-201ENST00000449954 GTPBP10A4D1E9 387 aaKnown RBP7.51□□□□□ -1.21
LINC01961-201ENST00000449954 USP27XA6NNY8 438 aa7.51□□□□□ -1.21
LINC01961-201ENST00000449954 C2orf74A8MZ97 194 aa7.51□□□□□ -1.21
LINC01961-201ENST00000449954 H3BRJ5 948 aa7.51□□□□□ -1.21
LINC01961-201ENST00000449954 KCNAB3O43448 404 aa7.51□□□□□ -1.21
LINC01961-201ENST00000449954 PVRP15151 417 aa7.51□□□□□ -1.21
LINC01961-201ENST00000449954 PFKFB1P16118 471 aa7.51□□□□□ -1.21
LINC01961-201ENST00000449954 ZNF24P17028 368 aa7.51□□□□□ -1.21
LINC01961-201ENST00000449954 PTGS2P35354 604 aa7.51□□□□□ -1.21
LINC01961-201ENST00000449954 MAXP61244 160 aa7.51□□□□□ -1.21
LINC01961-201ENST00000449954 HSF1Q00613 529 aa7.51□□□□□ -1.21
LINC01961-201ENST00000449954 DEFB110Q30KQ9 67 aa7.51□□□□□ -1.21
LINC01961-201ENST00000449954 ATP13A4Q4VNC1 1196 aa7.51□□□□□ -1.21
LINC01961-201ENST00000449954 GJB7Q6PEY0 223 aa7.51□□□□□ -1.21
LINC01961-201ENST00000449954 SHISA6Q6ZSJ9 500 aa7.51□□□□□ -1.21
LINC01961-201ENST00000449954 NLRP9Q7RTR0 991 aa7.51□□□□□ -1.21
LINC01961-201ENST00000449954 HOOK3Q86VS8 718 aa7.51□□□□□ -1.21
LINC01961-201ENST00000449954 CXorf67Q86X51 503 aaPredicted RBP7.51□□□□□ -1.21
LINC01961-201ENST00000449954 CCDC71Q8IV32 467 aaPredicted RBP7.51□□□□□ -1.21
LINC01961-201ENST00000449954 PGBD5Q8N414 524 aa7.51□□□□□ -1.21
LINC01961-201ENST00000449954 OR4E2Q8NGC2 313 aa7.51□□□□□ -1.21
LINC01961-201ENST00000449954 NSMCE1Q8WV22 266 aa7.51□□□□□ -1.21
LINC01961-201ENST00000449954 C12orf66Q96MD2 445 aa7.51□□□□□ -1.21
LINC01961-201ENST00000449954 TTC25Q96NG3 672 aa7.51□□□□□ -1.21
LINC01961-201ENST00000449954 SMIM14Q96QK8 99 aa7.51□□□□□ -1.21
LINC01961-201ENST00000449954 SPRTNQ9H040 489 aaPredicted RBP7.51□□□□□ -1.21
LINC01961-201ENST00000449954 SRMSQ9H3Y6 488 aa7.51□□□□□ -1.21
LINC01961-201ENST00000449954 PLEKHF2Q9H8W4 249 aa7.51□□□□□ -1.21
LINC01961-201ENST00000449954 SAMSN1Q9NSI8 373 aaKnown RBP7.51□□□□□ -1.21
LINC01961-201ENST00000449954 RMND1Q9NWS8 449 aa7.51□□□□□ -1.21
LINC01961-201ENST00000449954 CTSFQ9UBX1 484 aa7.51□□□□□ -1.21
LINC01961-201ENST00000449954 GNPTGQ9UJJ9 305 aa7.51□□□□□ -1.21
LINC01961-201ENST00000449954 CBLCQ9ULV8 474 aa7.51□□□□□ -1.21
LINC01961-201ENST00000449954 HEBP2Q9Y5Z4 205 aa7.51□□□□□ -1.21
LINC01961-201ENST00000449954 CFAP20Q9Y6A4 193 aaKnown RBP7.51□□□□□ -1.21
LINC01961-201ENST00000449954 SVEP1Q4LDE5 3571 aa7.5□□□□□ -1.21
LINC01961-201ENST00000449954 KLHL33A6NCF5 533 aa7.5□□□□□ -1.21
LINC01961-201ENST00000449954 VSTM2BA6NLU5 285 aa7.5□□□□□ -1.21
LINC01961-201ENST00000449954 EEF2KO00418 725 aaKnown RBP7.5□□□□□ -1.21
LINC01961-201ENST00000449954 RASGRF2O14827 1237 aa7.5□□□□□ -1.21
LINC01961-201ENST00000449954 DAPK3O43293 454 aa7.5□□□□□ -1.21
LINC01961-201ENST00000449954 MTX2O75431 263 aa7.5□□□□□ -1.21
LINC01961-201ENST00000449954 PEX11BO96011 259 aa7.5□□□□□ -1.21
LINC01961-201ENST00000449954 COX6A1P12074 109 aa7.5□□□□□ -1.21
LINC01961-201ENST00000449954 ICAM2P13598 275 aa7.5□□□□□ -1.21
LINC01961-201ENST00000449954 MMP13P45452 471 aa7.5□□□□□ -1.21
LINC01961-201ENST00000449954 GABRA4P48169 554 aa7.5□□□□□ -1.21
LINC01961-201ENST00000449954 TMPRSS15P98073 1019 aa7.5□□□□□ -1.21
LINC01961-201ENST00000449954 ZNF33BQ06732 778 aa7.5□□□□□ -1.21
LINC01961-201ENST00000449954 CUL4AQ13619 759 aa7.5□□□□□ -1.21
LINC01961-201ENST00000449954 KRT33BQ14525 404 aa7.5□□□□□ -1.21
LINC01961-201ENST00000449954 DAZAP2Q15038 168 aaPredicted RBP7.5□□□□□ -1.21
LINC01961-201ENST00000449954 SLC25A35Q3KQZ1 300 aa7.5□□□□□ -1.21
LINC01961-201ENST00000449954 TFDP3Q5H9I0 405 aa7.5□□□□□ -1.21
LINC01961-201ENST00000449954 MARC1Q5VT66 337 aa7.5□□□□□ -1.21
LINC01961-201ENST00000449954 TXNRD3NBQ6F5E7 133 aa7.5□□□□□ -1.21
LINC01961-201ENST00000449954 SCYL2Q6P3W7 929 aa7.5□□□□□ -1.21
LINC01961-201ENST00000449954 NEK10Q6ZWH5 1172 aa7.5□□□□□ -1.21
LINC01961-201ENST00000449954 COX15Q7KZN9 410 aa7.5□□□□□ -1.21
LINC01961-201ENST00000449954 FGD2Q7Z6J4 655 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms