RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 RAP2CQ9Y3L5 183 aa18.7■□□□□ 0.58
RPS28-202ENST00000449223 YKT6O15498 198 aa18.69■□□□□ 0.58
RPS28-202ENST00000449223 HSPA4LO95757 839 aa18.69■□□□□ 0.58
RPS28-202ENST00000449223 FAM107AO95990 144 aa18.69■□□□□ 0.58
RPS28-202ENST00000449223 CCND1P24385 295 aa18.69■□□□□ 0.58
RPS28-202ENST00000449223 RAB28P51157 221 aa18.69■□□□□ 0.58
RPS28-202ENST00000449223 PNLIPRP1P54315 467 aa18.69■□□□□ 0.58
RPS28-202ENST00000449223 GRIK2Q13002 908 aa18.69■□□□□ 0.58
RPS28-202ENST00000449223 PRKAA1Q13131 559 aa18.69■□□□□ 0.58
RPS28-202ENST00000449223 GTF2H2Q13888 395 aa18.69■□□□□ 0.58
RPS28-202ENST00000449223 SHBQ15464 509 aa18.69■□□□□ 0.58
RPS28-202ENST00000449223 GTF2H2CQ6P1K8 395 aa18.69■□□□□ 0.58
RPS28-202ENST00000449223 PRR23BQ6ZRT6 265 aa18.69■□□□□ 0.58
RPS28-202ENST00000449223 RPS27LQ71UM5 84 aaKnown RBP18.69■□□□□ 0.58
RPS28-202ENST00000449223 RBM12BQ8IXT5 1001 aaKnown RBP18.69■□□□□ 0.58
RPS28-202ENST00000449223 RAB42Q8N4Z0 105 aa18.69■□□□□ 0.58
RPS28-202ENST00000449223 LMX1AQ8TE12 382 aa18.69■□□□□ 0.58
RPS28-202ENST00000449223 GRAMD1AQ96CP6 724 aa18.69■□□□□ 0.58
RPS28-202ENST00000449223 CXorf40BQ96DE9 158 aa18.69■□□□□ 0.58
RPS28-202ENST00000449223 ZNF382Q96SR6 550 aa18.69■□□□□ 0.58
RPS28-202ENST00000449223 HGH1Q9BTY7 390 aa18.69■□□□□ 0.58
RPS28-202ENST00000449223 ILKAPQ9H0C8 392 aaPredicted RBP18.69■□□□□ 0.58
RPS28-202ENST00000449223 SLC40A1Q9NP59 571 aa18.69■□□□□ 0.58
RPS28-202ENST00000449223 LNPEPQ9UIQ6 1025 aa18.69■□□□□ 0.58
RPS28-202ENST00000449223 A0A1B0GTQ1 180 aa18.69■□□□□ 0.58
RPS28-202ENST00000449223 UBFD1O14562 309 aaKnown RBP18.69■□□□□ 0.58
RPS28-202ENST00000449223 YY2O15391 372 aa18.69■□□□□ 0.58
RPS28-202ENST00000449223 KATNA1O75449 491 aa18.69■□□□□ 0.58
RPS28-202ENST00000449223 EPB42P16452 691 aa18.69■□□□□ 0.58
RPS28-202ENST00000449223 EPORP19235 508 aa18.69■□□□□ 0.58
RPS28-202ENST00000449223 PKLRP30613 574 aa18.69■□□□□ 0.58
RPS28-202ENST00000449223 GDF5P43026 501 aa18.69■□□□□ 0.58
RPS28-202ENST00000449223 CCR10P46092 362 aa18.69■□□□□ 0.58
RPS28-202ENST00000449223 HK2P52789 917 aa18.69■□□□□ 0.58
RPS28-202ENST00000449223 CDH13P55290 713 aa18.69■□□□□ 0.58
RPS28-202ENST00000449223 PRKG2Q13237 762 aa18.69■□□□□ 0.58
RPS28-202ENST00000449223 TCEA2Q15560 299 aa18.69■□□□□ 0.58
RPS28-202ENST00000449223 CGB2Q6NT52 195 aa18.69■□□□□ 0.58
RPS28-202ENST00000449223 OGFOD3Q6PK18 319 aa18.69■□□□□ 0.58
RPS28-202ENST00000449223 IL27RAQ6UWB1 636 aa18.69■□□□□ 0.58
RPS28-202ENST00000449223 GOLGA7Q7Z5G4 137 aa18.69■□□□□ 0.58
RPS28-202ENST00000449223 CRLF3Q8IUI8 442 aa18.69■□□□□ 0.58
RPS28-202ENST00000449223 CHCHD4Q8N4Q1 142 aa18.69■□□□□ 0.58
RPS28-202ENST00000449223 FAM46DQ8NEK8 389 aa18.69■□□□□ 0.58
RPS28-202ENST00000449223 OR52E1Q8NGJ3 308 aa18.69■□□□□ 0.58
RPS28-202ENST00000449223 PIWIL2Q8TC59 973 aaKnown RBP18.69■□□□□ 0.58
RPS28-202ENST00000449223 ZDHHC1Q8WTX9 485 aa18.69■□□□□ 0.58
RPS28-202ENST00000449223 PRRX2Q99811 253 aa18.69■□□□□ 0.58
RPS28-202ENST00000449223 NTMT1Q9BV86 223 aa18.69■□□□□ 0.58
RPS28-202ENST00000449223 NSRP1Q9H0G5 558 aaKnown RBP18.69■□□□□ 0.58
RPS28-202ENST00000449223 ACSS2Q9NR19 701 aa18.69■□□□□ 0.58
RPS28-202ENST00000449223 INTS7Q9NVH2 962 aaKnown RBP18.69■□□□□ 0.58
RPS28-202ENST00000449223 CPNE7Q9UBL6 633 aa18.69■□□□□ 0.58
RPS28-202ENST00000449223 SLC6A14Q9UN76 642 aa18.69■□□□□ 0.58
RPS28-202ENST00000449223 TDRKHQ9Y2W6 561 aaKnown RBP18.69■□□□□ 0.58
RPS28-202ENST00000449223 MYO15AQ9UKN7 3530 aa18.68■□□□□ 0.58
RPS28-202ENST00000449223 CCNT2O60583 730 aaKnown RBP18.68■□□□□ 0.58
RPS28-202ENST00000449223 FGF4P08620 206 aa18.68■□□□□ 0.58
RPS28-202ENST00000449223 EPHA8P29322 1005 aaPredicted RBP18.68■□□□□ 0.58
RPS28-202ENST00000449223 FASLGP48023 281 aa18.68■□□□□ 0.58
RPS28-202ENST00000449223 PKNOX1P55347 436 aa18.68■□□□□ 0.58
RPS28-202ENST00000449223 NAE1Q13564 534 aa18.68■□□□□ 0.58
RPS28-202ENST00000449223 E2F2Q14209 437 aa18.68■□□□□ 0.58
RPS28-202ENST00000449223 KANSL1Q7Z3B3 1105 aa18.68■□□□□ 0.58
RPS28-202ENST00000449223 CUZD1Q86UP6 607 aa18.68■□□□□ 0.58
RPS28-202ENST00000449223 SYTL1Q8IYJ3 562 aa18.68■□□□□ 0.58
RPS28-202ENST00000449223 TEX9Q8N6V9 391 aa18.68■□□□□ 0.58
RPS28-202ENST00000449223 ZNF781Q8N8C0 355 aa18.68■□□□□ 0.58
RPS28-202ENST00000449223 SLC37A2Q8TED4 501 aa18.68■□□□□ 0.58
RPS28-202ENST00000449223 AGAP11Q8TF27 550 aa18.68■□□□□ 0.58
RPS28-202ENST00000449223 CCT8L2Q96SF2 557 aa18.68■□□□□ 0.58
RPS28-202ENST00000449223 ATG10Q9H0Y0 220 aa18.68■□□□□ 0.58
RPS28-202ENST00000449223 DNAJC11Q9NVH1 559 aa18.68■□□□□ 0.58
RPS28-202ENST00000449223 SLC22A14Q9Y267 594 aa18.68■□□□□ 0.58
RPS28-202ENST00000449223 CABIN1Q9Y6J0 2220 aa18.68■□□□□ 0.58
RPS28-202ENST00000449223 OR7A17O14581 309 aa18.67■□□□□ 0.58
RPS28-202ENST00000449223 WDR47O94967 919 aa18.67■□□□□ 0.58
RPS28-202ENST00000449223 ESRRBO95718 433 aa18.67■□□□□ 0.58
RPS28-202ENST00000449223 TBPL1P62380 186 aa18.67■□□□□ 0.58
RPS28-202ENST00000449223 SH3BP2P78314 561 aa18.67■□□□□ 0.58
RPS28-202ENST00000449223 KRT33BQ14525 404 aa18.67■□□□□ 0.58
RPS28-202ENST00000449223 PRAMEF14Q5SWL7 426 aa18.67■□□□□ 0.58
RPS28-202ENST00000449223 CAPN13Q6MZZ7 669 aaPredicted RBP18.67■□□□□ 0.58
RPS28-202ENST00000449223 SLC9B2Q86UD5 537 aa18.67■□□□□ 0.58
RPS28-202ENST00000449223 HOMEZQ8IX15 550 aa18.67■□□□□ 0.58
RPS28-202ENST00000449223 OR2L8Q8NGY9 312 aa18.67■□□□□ 0.58
RPS28-202ENST00000449223 TRPC4APQ8TEL6 797 aa18.67■□□□□ 0.58
RPS28-202ENST00000449223 SETD7Q8WTS6 366 aaKnown RBP18.67■□□□□ 0.58
RPS28-202ENST00000449223 PYCR2Q96C36 320 aa18.67■□□□□ 0.58
RPS28-202ENST00000449223 SIKE1Q9BRV8 207 aa18.67■□□□□ 0.58
RPS28-202ENST00000449223 IPPKQ9H8X2 491 aa18.67■□□□□ 0.58
RPS28-202ENST00000449223 SEMA4BQ9NPR2 832 aaPredicted RBP18.67■□□□□ 0.58
RPS28-202ENST00000449223 CCDC177Q9NQR7 707 aaPredicted RBP18.67■□□□□ 0.58
RPS28-202ENST00000449223 UCKL1Q9NWZ5 548 aa18.67■□□□□ 0.58
RPS28-202ENST00000449223 GPRC5BQ9NZH0 403 aa18.67■□□□□ 0.58
RPS28-202ENST00000449223 OR6C2Q9NZP2 312 aa18.67■□□□□ 0.58
RPS28-202ENST00000449223 CIDEBQ9UHD4 219 aa18.67■□□□□ 0.58
RPS28-202ENST00000449223 ZNF225Q9UK10 706 aa18.67■□□□□ 0.58
RPS28-202ENST00000449223 ICKQ9UPZ9 632 aa18.67■□□□□ 0.58
RPS28-202ENST00000449223 CUL9Q8IWT3 2517 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms