RNA–Protein interactions for RNA: ENST00000449058.6

TOM1-210, Transcript of target of myb1 membrane trafficking protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TOM1, Length 2,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-210ENST00000449058 ASB11Q8WXH4 323 aa16.51■□□□□ 0.23
TOM1-210ENST00000449058 MRPS31Q92665 395 aaKnown RBP16.51■□□□□ 0.23
TOM1-210ENST00000449058 TESCQ96BS2 214 aa16.51■□□□□ 0.23
TOM1-210ENST00000449058 ZNF689Q96CS4 500 aaPredicted RBP16.51■□□□□ 0.23
TOM1-210ENST00000449058 HHIPQ96QV1 700 aa16.51■□□□□ 0.23
TOM1-210ENST00000449058 ING2Q9H160 280 aa16.51■□□□□ 0.23
TOM1-210ENST00000449058 TMEM9Q9P0T7 183 aa16.51■□□□□ 0.23
TOM1-210ENST00000449058 MBD1Q9UIS9 605 aaPredicted RBP16.51■□□□□ 0.23
TOM1-210ENST00000449058 SNX6Q9UNH7 406 aa16.51■□□□□ 0.23
TOM1-210ENST00000449058 HS3ST2Q9Y278 367 aa16.51■□□□□ 0.23
TOM1-210ENST00000449058 TEX28O15482 410 aa16.5■□□□□ 0.23
TOM1-210ENST00000449058 OR56A5P0C7T3 313 aa16.5■□□□□ 0.23
TOM1-210ENST00000449058 S100A3P33764 101 aa16.5■□□□□ 0.23
TOM1-210ENST00000449058 STT3AP46977 705 aa16.5■□□□□ 0.23
TOM1-210ENST00000449058 LAPTM5Q13571 262 aa16.5■□□□□ 0.23
TOM1-210ENST00000449058 NEDD8Q15843 81 aa16.5■□□□□ 0.23
TOM1-210ENST00000449058 C22orf39Q6P5X5 142 aa16.5■□□□□ 0.23
TOM1-210ENST00000449058 BEND7Q8N7W2 519 aaPredicted RBP16.5■□□□□ 0.23
TOM1-210ENST00000449058 HDAC2Q92769 488 aaKnown RBP16.5■□□□□ 0.23
TOM1-210ENST00000449058 POP5Q969H6 163 aaKnown RBP16.5■□□□□ 0.23
TOM1-210ENST00000449058 CMTM7Q96FZ5 175 aa16.5■□□□□ 0.23
TOM1-210ENST00000449058 ITCHQ96J02 903 aa16.5■□□□□ 0.23
TOM1-210ENST00000449058 CAPNS2Q96L46 248 aa16.5■□□□□ 0.23
TOM1-210ENST00000449058 RBM4BQ9BQ04 359 aaKnown RBP16.5■□□□□ 0.23
TOM1-210ENST00000449058 DCUN1D5Q9BTE7 237 aa16.5■□□□□ 0.23
TOM1-210ENST00000449058 RBM4Q9BWF3 364 aaKnown RBP16.5■□□□□ 0.23
TOM1-210ENST00000449058 CPEB1Q9BZB8 566 aaKnown RBP16.5■□□□□ 0.23
TOM1-210ENST00000449058 AMBRA1Q9C0C7 1298 aa16.5■□□□□ 0.23
TOM1-210ENST00000449058 ABCG8Q9H221 673 aa16.5■□□□□ 0.23
TOM1-210ENST00000449058 HPS4Q9NQG7 708 aa16.5■□□□□ 0.23
TOM1-210ENST00000449058 TMPRSS11EQ9UL52 423 aa16.5■□□□□ 0.23
TOM1-210ENST00000449058 A0A0J9YVX5 310 aa16.5■□□□□ 0.23
TOM1-210ENST00000449058 PCSK2P16519 638 aa16.5■□□□□ 0.23
TOM1-210ENST00000449058 HOXB6P17509 224 aaKnown RBP16.5■□□□□ 0.23
TOM1-210ENST00000449058 CRHBPP24387 322 aa16.5■□□□□ 0.23
TOM1-210ENST00000449058 HNRNPFP52597 415 aaKnown RBP16.5■□□□□ 0.23
TOM1-210ENST00000449058 BROXQ5VW32 411 aa16.5■□□□□ 0.23
TOM1-210ENST00000449058 TMC8Q8IU68 726 aa16.5■□□□□ 0.23
TOM1-210ENST00000449058 HS3ST5Q8IZT8 346 aa16.5■□□□□ 0.23
TOM1-210ENST00000449058 TMEM132CQ8N3T6 1108 aa16.5■□□□□ 0.23
TOM1-210ENST00000449058 ZCCHC7Q8N3Z6 543 aaKnown RBP16.5■□□□□ 0.23
TOM1-210ENST00000449058 DRAXINQ8NBI3 349 aaPredicted RBP16.5■□□□□ 0.23
TOM1-210ENST00000449058 NETO1Q8TDF5 533 aa16.5■□□□□ 0.23
TOM1-210ENST00000449058 VWCEQ96DN2 955 aa16.5■□□□□ 0.23
TOM1-210ENST00000449058 FAM120BQ96EK7 910 aaKnown RBP16.5■□□□□ 0.23
TOM1-210ENST00000449058 INPP5KQ9BT40 448 aa16.5■□□□□ 0.23
TOM1-210ENST00000449058 ELOVL6Q9H5J4 265 aa16.5■□□□□ 0.23
TOM1-210ENST00000449058 RMND5AQ9H871 391 aa16.5■□□□□ 0.23
TOM1-210ENST00000449058 PREBQ9HCU5 417 aa16.5■□□□□ 0.23
TOM1-210ENST00000449058 SPG21Q9NZD8 308 aa16.5■□□□□ 0.23
TOM1-210ENST00000449058 PPT2Q9UMR5 302 aa16.5■□□□□ 0.23
TOM1-210ENST00000449058 SERTM1A2A2V5 107 aa16.49■□□□□ 0.23
TOM1-210ENST00000449058 C16orf96A6NNT2 1141 aa16.49■□□□□ 0.23
TOM1-210ENST00000449058 TMX2-CTNND1H3BSU7 103 aa16.49■□□□□ 0.23
TOM1-210ENST00000449058 WNT9AO14904 365 aa16.49■□□□□ 0.23
TOM1-210ENST00000449058 SEC14L2O76054 403 aa16.49■□□□□ 0.23
TOM1-210ENST00000449058 C1SP09871 688 aa16.49■□□□□ 0.23
TOM1-210ENST00000449058 MPC1LP0DKB6 136 aa16.49■□□□□ 0.23
TOM1-210ENST00000449058 ACPPP15309 386 aa16.49■□□□□ 0.23
TOM1-210ENST00000449058 SDC1P18827 310 aa16.49■□□□□ 0.23
TOM1-210ENST00000449058 TACR1P25103 407 aa16.49■□□□□ 0.23
TOM1-210ENST00000449058 HNMTP50135 292 aa16.49■□□□□ 0.23
TOM1-210ENST00000449058 ZDHHC20Q5W0Z9 365 aa16.49■□□□□ 0.23
TOM1-210ENST00000449058 NEK5Q6P3R8 708 aa16.49■□□□□ 0.23
TOM1-210ENST00000449058 ANKRD33Q7Z3H0 272 aa16.49■□□□□ 0.23
TOM1-210ENST00000449058 ADHFE1Q8IWW8 467 aa16.49■□□□□ 0.23
TOM1-210ENST00000449058 HS6ST3Q8IZP7 471 aa16.49■□□□□ 0.23
TOM1-210ENST00000449058 NCLNQ969V3 563 aa16.49■□□□□ 0.23
TOM1-210ENST00000449058 NAA50Q9GZZ1 169 aaKnown RBP16.49■□□□□ 0.23
TOM1-210ENST00000449058 RC3H2Q9HBD1 1191 aaKnown RBP16.49■□□□□ 0.23
TOM1-210ENST00000449058 PCDHGA8Q9Y5G5 932 aa16.49■□□□□ 0.23
TOM1-210ENST00000449058 HELZP42694 1942 aaKnown RBP16.49■□□□□ 0.23
TOM1-210ENST00000449058 NRG2O14511 850 aaPredicted RBP16.49■□□□□ 0.23
TOM1-210ENST00000449058 ABCB7O75027 752 aa16.49■□□□□ 0.23
TOM1-210ENST00000449058 SERPINA1P01009 418 aa16.49■□□□□ 0.23
TOM1-210ENST00000449058 EEF1B2P24534 225 aaKnown RBP16.49■□□□□ 0.23
TOM1-210ENST00000449058 PIGAP37287 484 aa16.49■□□□□ 0.23
TOM1-210ENST00000449058 DCTP40126 519 aa16.49■□□□□ 0.23
TOM1-210ENST00000449058 NEK2P51955 445 aa16.49■□□□□ 0.23
TOM1-210ENST00000449058 HSPA14Q0VDF9 509 aa16.49■□□□□ 0.23
TOM1-210ENST00000449058 PTCHD3Q3KNS1 767 aa16.49■□□□□ 0.23
TOM1-210ENST00000449058 SLC44A4Q53GD3 710 aa16.49■□□□□ 0.23
TOM1-210ENST00000449058 XAF1Q6GPH4 301 aa16.49■□□□□ 0.23
TOM1-210ENST00000449058 CNKSR3Q6P9H4 555 aa16.49■□□□□ 0.23
TOM1-210ENST00000449058 TMEM179BQ7Z7N9 219 aa16.49■□□□□ 0.23
TOM1-210ENST00000449058 VRK3Q8IV63 474 aa16.49■□□□□ 0.23
TOM1-210ENST00000449058 CMTM8Q8IZV2 173 aa16.49■□□□□ 0.23
TOM1-210ENST00000449058 OR5K1Q8NHB7 308 aa16.49■□□□□ 0.23
TOM1-210ENST00000449058 REXO5Q96IC2 774 aaKnown RBP16.49■□□□□ 0.23
TOM1-210ENST00000449058 TSSK3Q96PN8 268 aa16.49■□□□□ 0.23
TOM1-210ENST00000449058 FANCEQ9HB96 536 aa16.49■□□□□ 0.23
TOM1-210ENST00000449058 PLGRKTQ9HBL7 147 aa16.49■□□□□ 0.23
TOM1-210ENST00000449058 TMED5Q9Y3A6 229 aa16.49■□□□□ 0.23
TOM1-210ENST00000449058 GFYI3L273 518 aa16.48■□□□□ 0.23
TOM1-210ENST00000449058 GNGT2O14610 69 aa16.48■□□□□ 0.23
TOM1-210ENST00000449058 PER2O15055 1255 aa16.48■□□□□ 0.23
TOM1-210ENST00000449058 NOBOXO60393 691 aa16.48■□□□□ 0.23
TOM1-210ENST00000449058 PRAMEF4O60810 478 aa16.48■□□□□ 0.23
TOM1-210ENST00000449058 MAPK1P28482 360 aa16.48■□□□□ 0.23
TOM1-210ENST00000449058 HLA-FP30511 346 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms