RNA–Protein interactions for RNA: ENST00000448935.6

VIPAS39-203, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,623 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-203ENST00000448935 MTCH2Q9Y6C9 303 aa10.29□□□□□ -0.76
VIPAS39-203ENST00000448935 LAMA2P24043 3122 aaKnown RBP10.29□□□□□ -0.76
VIPAS39-203ENST00000448935 A0A1W2PP55 124 aa10.29□□□□□ -0.76
VIPAS39-203ENST00000448935 SERTM1A2A2V5 107 aa10.29□□□□□ -0.76
VIPAS39-203ENST00000448935 FAM234BA2RU67 622 aa10.29□□□□□ -0.76
VIPAS39-203ENST00000448935 TMEM202A6NGA9 273 aa10.29□□□□□ -0.76
VIPAS39-203ENST00000448935 IGLON5A6NGN9 336 aa10.29□□□□□ -0.76
VIPAS39-203ENST00000448935 H0Y3Z8 333 aa10.29□□□□□ -0.76
VIPAS39-203ENST00000448935 K7ESM1 405 aa10.29□□□□□ -0.76
VIPAS39-203ENST00000448935 FBP2O00757 339 aa10.29□□□□□ -0.76
VIPAS39-203ENST00000448935 CLGNO14967 610 aa10.29□□□□□ -0.76
VIPAS39-203ENST00000448935 LSM1O15116 133 aaKnown RBP10.29□□□□□ -0.76
VIPAS39-203ENST00000448935 RNASEH2AO75792 299 aaKnown RBP10.29□□□□□ -0.76
VIPAS39-203ENST00000448935 POP7O75817 140 aaKnown RBP10.29□□□□□ -0.76
VIPAS39-203ENST00000448935 KRT36O76013 467 aa10.29□□□□□ -0.76
VIPAS39-203ENST00000448935 PDE5AO76074 875 aa10.29□□□□□ -0.76
VIPAS39-203ENST00000448935 STAMBPO95630 424 aa10.29□□□□□ -0.76
VIPAS39-203ENST00000448935 NPPAP01160 153 aa10.29□□□□□ -0.76
VIPAS39-203ENST00000448935 GNPDA1P46926 289 aa10.29□□□□□ -0.76
VIPAS39-203ENST00000448935 PREPP48147 710 aa10.29□□□□□ -0.76
VIPAS39-203ENST00000448935 HTR6P50406 440 aa10.29□□□□□ -0.76
VIPAS39-203ENST00000448935 DIO3P55073 304 aa10.29□□□□□ -0.76
VIPAS39-203ENST00000448935 TAS2R38P59533 333 aa10.29□□□□□ -0.76
VIPAS39-203ENST00000448935 RPS21P63220 83 aaKnown RBP10.29□□□□□ -0.76
VIPAS39-203ENST00000448935 MRPS21P82921 87 aaKnown RBP10.29□□□□□ -0.76
VIPAS39-203ENST00000448935 GRSF1Q12849 480 aaKnown RBP eCLIP10.29□□□□□ -0.76
VIPAS39-203ENST00000448935 PRKG2Q13237 762 aa10.29□□□□□ -0.76
VIPAS39-203ENST00000448935 ABRAXAS2Q15018 415 aa10.29□□□□□ -0.76
VIPAS39-203ENST00000448935 AP5B1Q2VPB7 878 aa10.29□□□□□ -0.76
VIPAS39-203ENST00000448935 SPATS1Q496A3 300 aa10.29□□□□□ -0.76
VIPAS39-203ENST00000448935 ZNF658BQ4V348 819 aaPredicted RBP10.29□□□□□ -0.76
VIPAS39-203ENST00000448935 CACHD1Q5VU97 1274 aa10.29□□□□□ -0.76
VIPAS39-203ENST00000448935 SCIMPQ6UWF3 145 aa10.29□□□□□ -0.76
VIPAS39-203ENST00000448935 UNC5DQ6UXZ4 953 aa10.29□□□□□ -0.76
VIPAS39-203ENST00000448935 LRRTM4Q86VH4 590 aa10.29□□□□□ -0.76
VIPAS39-203ENST00000448935 HPS6Q86YV9 775 aa10.29□□□□□ -0.76
VIPAS39-203ENST00000448935 FUNDC1Q8IVP5 155 aa10.29□□□□□ -0.76
VIPAS39-203ENST00000448935 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.29□□□□□ -0.76
VIPAS39-203ENST00000448935 SFRP1Q8N474 314 aa10.29□□□□□ -0.76
VIPAS39-203ENST00000448935 PPFIBP2Q8ND30 876 aa10.29□□□□□ -0.76
VIPAS39-203ENST00000448935 OR2T11Q8NH01 316 aa10.29□□□□□ -0.76
VIPAS39-203ENST00000448935 GANCQ8TET4 914 aa10.29□□□□□ -0.76
VIPAS39-203ENST00000448935 DNASE1L2Q92874 299 aa10.29□□□□□ -0.76
VIPAS39-203ENST00000448935 CCDC124Q96CT7 223 aaKnown RBP10.29□□□□□ -0.76
VIPAS39-203ENST00000448935 SPDL1Q96EA4 605 aa10.29□□□□□ -0.76
VIPAS39-203ENST00000448935 MSANTD3Q96H12 275 aa10.29□□□□□ -0.76
VIPAS39-203ENST00000448935 ZBTB18Q99592 522 aa10.29□□□□□ -0.76
VIPAS39-203ENST00000448935 ELOVL6Q9H5J4 265 aa10.29□□□□□ -0.76
VIPAS39-203ENST00000448935 EBF2Q9HAK2 575 aa10.29□□□□□ -0.76
VIPAS39-203ENST00000448935 ZDHHC4Q9NPG8 344 aa10.29□□□□□ -0.76
VIPAS39-203ENST00000448935 ITM2CQ9NQX7 267 aa10.29□□□□□ -0.76
VIPAS39-203ENST00000448935 ASIC5Q9NY37 505 aa10.29□□□□□ -0.76
VIPAS39-203ENST00000448935 GPRC5BQ9NZH0 403 aa10.29□□□□□ -0.76
VIPAS39-203ENST00000448935 FAM8A1Q9UBU6 413 aa10.29□□□□□ -0.76
VIPAS39-203ENST00000448935 GIMAP2Q9UG22 337 aa10.29□□□□□ -0.76
VIPAS39-203ENST00000448935 LEF1Q9UJU2 399 aaPredicted RBP10.29□□□□□ -0.76
VIPAS39-203ENST00000448935 RNF11Q9Y3C5 154 aa10.29□□□□□ -0.76
VIPAS39-203ENST00000448935 L3MBTL1Q9Y468 752 aa10.29□□□□□ -0.76
VIPAS39-203ENST00000448935 A0A1W2PP18 115 aa10.28□□□□□ -0.76
VIPAS39-203ENST00000448935 CCDC154A6NI56 674 aa10.28□□□□□ -0.76
VIPAS39-203ENST00000448935 NPIPB8E9PQR5 432 aa10.28□□□□□ -0.76
VIPAS39-203ENST00000448935 ANP32DO95626 131 aa10.28□□□□□ -0.76
VIPAS39-203ENST00000448935 RPN2P04844 631 aa10.28□□□□□ -0.76
VIPAS39-203ENST00000448935 PCCBP05166 539 aa10.28□□□□□ -0.76
VIPAS39-203ENST00000448935 JUPP14923 745 aa10.28□□□□□ -0.76
VIPAS39-203ENST00000448935 GLULP15104 373 aa10.28□□□□□ -0.76
VIPAS39-203ENST00000448935 ZNF8P17098 575 aaPredicted RBP10.28□□□□□ -0.76
VIPAS39-203ENST00000448935 HNF4AP41235 474 aa10.28□□□□□ -0.76
VIPAS39-203ENST00000448935 HALP42357 657 aa10.28□□□□□ -0.76
VIPAS39-203ENST00000448935 POLR2JP52435 117 aaKnown RBP10.28□□□□□ -0.76
VIPAS39-203ENST00000448935 PNLIPRP1P54315 467 aa10.28□□□□□ -0.76
VIPAS39-203ENST00000448935 PFN3P60673 137 aa10.28□□□□□ -0.76
VIPAS39-203ENST00000448935 CDK3Q00526 305 aa10.28□□□□□ -0.76
VIPAS39-203ENST00000448935 IRF8Q02556 426 aa10.28□□□□□ -0.76
VIPAS39-203ENST00000448935 PCDH1Q08174 1060 aa10.28□□□□□ -0.76
VIPAS39-203ENST00000448935 SGCGQ13326 291 aa10.28□□□□□ -0.76
VIPAS39-203ENST00000448935 RCAN2Q14206 197 aa10.28□□□□□ -0.76
VIPAS39-203ENST00000448935 CPSF6Q16630 551 aaKnown RBP eCLIP10.28□□□□□ -0.76
VIPAS39-203ENST00000448935 ZNF423Q2M1K9 1284 aa10.28□□□□□ -0.76
VIPAS39-203ENST00000448935 AAK1Q2M2I8 961 aa10.28□□□□□ -0.76
VIPAS39-203ENST00000448935 SAMD4BQ5PRF9 694 aaKnown RBP10.28□□□□□ -0.76
VIPAS39-203ENST00000448935 TCHHL1Q5QJ38 904 aaPredicted RBP10.28□□□□□ -0.76
VIPAS39-203ENST00000448935 AGTRAPQ6RW13 159 aa10.28□□□□□ -0.76
VIPAS39-203ENST00000448935 PRR23BQ6ZRT6 265 aa10.28□□□□□ -0.76
VIPAS39-203ENST00000448935 TRIM74Q86UV6 250 aa10.28□□□□□ -0.76
VIPAS39-203ENST00000448935 KBTBD6Q86V97 674 aa10.28□□□□□ -0.76
VIPAS39-203ENST00000448935 AMZ2Q86W34 360 aa10.28□□□□□ -0.76
VIPAS39-203ENST00000448935 THOC6Q86W42 341 aaKnown RBP10.28□□□□□ -0.76
VIPAS39-203ENST00000448935 HEATR4Q86WZ0 1026 aa10.28□□□□□ -0.76
VIPAS39-203ENST00000448935 MINDY1Q8N5J2 469 aa10.28□□□□□ -0.76
VIPAS39-203ENST00000448935 GLB1L3Q8NCI6 653 aaPredicted RBP10.28□□□□□ -0.76
VIPAS39-203ENST00000448935 OR9I1Q8NGQ6 314 aa10.28□□□□□ -0.76
VIPAS39-203ENST00000448935 SELENOMQ8WWX9 145 aa10.28□□□□□ -0.76
VIPAS39-203ENST00000448935 FAM131CQ96AQ9 280 aa10.28□□□□□ -0.76
VIPAS39-203ENST00000448935 PHPT1Q9NRX4 125 aaPredicted RBP10.28□□□□□ -0.76
VIPAS39-203ENST00000448935 C1orf109Q9NX04 203 aa10.28□□□□□ -0.76
VIPAS39-203ENST00000448935 FBXL12Q9NXK8 326 aa10.28□□□□□ -0.76
VIPAS39-203ENST00000448935 ADA2Q9NZK5 511 aa10.28□□□□□ -0.76
VIPAS39-203ENST00000448935 STOX2Q9P2F5 926 aaPredicted RBP10.28□□□□□ -0.76
VIPAS39-203ENST00000448935 SUCOQ9UBS9 1254 aaKnown RBP10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms