RNA–Protein interactions for RNA: ENST00000448611.6

LMNA-208, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 1,943 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-208ENST00000448611 MGAT4DA6NG13 374 aa17.22■□□□□ 0.35
LMNA-208ENST00000448611 CCDC154A6NI56 674 aa17.22■□□□□ 0.35
LMNA-208ENST00000448611 H3BNX3 289 aa17.22■□□□□ 0.35
LMNA-208ENST00000448611 RNASEH2AO75792 299 aaKnown RBP17.22■□□□□ 0.35
LMNA-208ENST00000448611 SLC16A8O95907 504 aa17.22■□□□□ 0.35
LMNA-208ENST00000448611 PCCBP05166 539 aa17.22■□□□□ 0.35
LMNA-208ENST00000448611 IMPA1P29218 277 aa17.22■□□□□ 0.35
LMNA-208ENST00000448611 CTHP32929 405 aa17.22■□□□□ 0.35
LMNA-208ENST00000448611 SLC7A2P52569 658 aa17.22■□□□□ 0.35
LMNA-208ENST00000448611 CDK3Q00526 305 aa17.22■□□□□ 0.35
LMNA-208ENST00000448611 PRKG2Q13237 762 aa17.22■□□□□ 0.35
LMNA-208ENST00000448611 TLR1Q15399 786 aa17.22■□□□□ 0.35
LMNA-208ENST00000448611 TMEM196Q5HYL7 178 aa17.22■□□□□ 0.35
LMNA-208ENST00000448611 THOC6Q86W42 341 aaKnown RBP17.22■□□□□ 0.35
LMNA-208ENST00000448611 OR56A3Q8NH54 315 aa17.22■□□□□ 0.35
LMNA-208ENST00000448611 HM13Q8TCT9 377 aa17.22■□□□□ 0.35
LMNA-208ENST00000448611 MTFMTQ96DP5 389 aaKnown RBP17.22■□□□□ 0.35
LMNA-208ENST00000448611 MKRN2Q9H000 416 aaKnown RBP17.22■□□□□ 0.35
LMNA-208ENST00000448611 LRTM1Q9HBL6 345 aa17.22■□□□□ 0.35
LMNA-208ENST00000448611 ASIC5Q9NY37 505 aa17.22■□□□□ 0.35
LMNA-208ENST00000448611 ABCD2Q9UBJ2 740 aa17.22■□□□□ 0.35
LMNA-208ENST00000448611 LRRC42Q9Y546 428 aa17.22■□□□□ 0.35
LMNA-208ENST00000448611 JUPP14923 745 aa17.21■□□□□ 0.35
LMNA-208ENST00000448611 TCN1P20061 433 aaPredicted RBP17.21■□□□□ 0.35
LMNA-208ENST00000448611 JAK1P23458 1154 aa17.21■□□□□ 0.35
LMNA-208ENST00000448611 NTSR1P30989 418 aa17.21■□□□□ 0.35
LMNA-208ENST00000448611 CCR3P51677 355 aa17.21■□□□□ 0.35
LMNA-208ENST00000448611 PLOD1Q02809 727 aaPredicted RBP17.21■□□□□ 0.35
LMNA-208ENST00000448611 CHIT1Q13231 466 aa17.21■□□□□ 0.35
LMNA-208ENST00000448611 MAD2L1Q13257 205 aaPredicted RBP17.21■□□□□ 0.35
LMNA-208ENST00000448611 TRIM25Q14258 630 aaKnown RBP17.21■□□□□ 0.35
LMNA-208ENST00000448611 NFE2L1Q14494 772 aa17.21■□□□□ 0.35
LMNA-208ENST00000448611 IMPG1Q17R60 797 aa17.21■□□□□ 0.35
LMNA-208ENST00000448611 PAGE3Q5JUK9 113 aa17.21■□□□□ 0.35
LMNA-208ENST00000448611 SAMD4BQ5PRF9 694 aaKnown RBP17.21■□□□□ 0.35
LMNA-208ENST00000448611 SELENOMQ8WWX9 145 aa17.21■□□□□ 0.35
LMNA-208ENST00000448611 FAM131CQ96AQ9 280 aa17.21■□□□□ 0.35
LMNA-208ENST00000448611 LRRC58Q96CX6 371 aa17.21■□□□□ 0.35
LMNA-208ENST00000448611 MAGEB10Q96LZ2 347 aaPredicted RBP17.21■□□□□ 0.35
LMNA-208ENST00000448611 ANKRD27Q96NW4 1050 aa17.21■□□□□ 0.35
LMNA-208ENST00000448611 LGR4Q9BXB1 951 aa17.21■□□□□ 0.35
LMNA-208ENST00000448611 ELOVL6Q9H5J4 265 aa17.21■□□□□ 0.35
LMNA-208ENST00000448611 IL1RL2Q9HB29 575 aa17.21■□□□□ 0.35
LMNA-208ENST00000448611 GID8Q9NWU2 228 aa17.21■□□□□ 0.35
LMNA-208ENST00000448611 NMRK1Q9NWW6 199 aa17.21■□□□□ 0.35
LMNA-208ENST00000448611 C1orf109Q9NX04 203 aa17.21■□□□□ 0.35
LMNA-208ENST00000448611 CIDEBQ9UHD4 219 aa17.21■□□□□ 0.35
LMNA-208ENST00000448611 BCAP29Q9UHQ4 241 aa17.21■□□□□ 0.35
LMNA-208ENST00000448611 EIF3LQ9Y262 564 aaKnown RBP17.21■□□□□ 0.35
LMNA-208ENST00000448611 SERTM1A2A2V5 107 aa17.21■□□□□ 0.35
LMNA-208ENST00000448611 DYTNA2CJ06 578 aa17.21■□□□□ 0.35
LMNA-208ENST00000448611 UGDHO60701 494 aa17.21■□□□□ 0.35
LMNA-208ENST00000448611 RSL1D1O76021 490 aaKnown RBP17.21■□□□□ 0.35
LMNA-208ENST00000448611 BAG2O95816 211 aa17.21■□□□□ 0.35
LMNA-208ENST00000448611 NEK2P51955 445 aa17.21■□□□□ 0.35
LMNA-208ENST00000448611 FOXM1Q08050 763 aa17.21■□□□□ 0.35
LMNA-208ENST00000448611 PCDH1Q08174 1060 aa17.21■□□□□ 0.35
LMNA-208ENST00000448611 NAE1Q13564 534 aa17.21■□□□□ 0.35
LMNA-208ENST00000448611 KIAA0040Q15053 153 aa17.21■□□□□ 0.35
LMNA-208ENST00000448611 PLA2G4EQ3MJ16 856 aa17.21■□□□□ 0.35
LMNA-208ENST00000448611 TIGD2Q4W5G0 525 aa17.21■□□□□ 0.35
LMNA-208ENST00000448611 LIPJQ5W064 366 aa17.21■□□□□ 0.35
LMNA-208ENST00000448611 PRMT9Q6P2P2 845 aa17.21■□□□□ 0.35
LMNA-208ENST00000448611 FAM83HQ6ZRV2 1179 aaPredicted RBP17.21■□□□□ 0.35
LMNA-208ENST00000448611 BHLHE22Q8NFJ8 381 aaPredicted RBP17.21■□□□□ 0.35
LMNA-208ENST00000448611 OR4K3Q96R72 315 aa17.21■□□□□ 0.35
LMNA-208ENST00000448611 DPEP2Q9H4A9 486 aa17.21■□□□□ 0.35
LMNA-208ENST00000448611 MBNL1Q9NR56 388 aaKnown RBP17.21■□□□□ 0.35
LMNA-208ENST00000448611 LEF1Q9UJU2 399 aaPredicted RBP17.21■□□□□ 0.35
LMNA-208ENST00000448611 ZFR2Q9UPR6 939 aaKnown RBP17.21■□□□□ 0.35
LMNA-208ENST00000448611 H3BQ06 376 aaPredicted RBP17.2■□□□□ 0.34
LMNA-208ENST00000448611 SEC22BO75396 215 aa17.2■□□□□ 0.34
LMNA-208ENST00000448611 EGFP01133 1207 aa17.2■□□□□ 0.34
LMNA-208ENST00000448611 CD22P20273 847 aa17.2■□□□□ 0.34
LMNA-208ENST00000448611 PRPH2P23942 346 aa17.2■□□□□ 0.34
LMNA-208ENST00000448611 SLC6A2P23975 617 aa17.2■□□□□ 0.34
LMNA-208ENST00000448611 ACADLP28330 430 aa17.2■□□□□ 0.34
LMNA-208ENST00000448611 HALP42357 657 aa17.2■□□□□ 0.34
LMNA-208ENST00000448611 FGL2Q14314 439 aa17.2■□□□□ 0.34
LMNA-208ENST00000448611 ICE2Q659A1 982 aa17.2■□□□□ 0.34
LMNA-208ENST00000448611 TRMT11Q7Z4G4 463 aaKnown RBP17.2■□□□□ 0.34
LMNA-208ENST00000448611 DHDDSQ86SQ9 333 aa17.2■□□□□ 0.34
LMNA-208ENST00000448611 IL17RCQ8NAC3 791 aa17.2■□□□□ 0.34
LMNA-208ENST00000448611 MED8Q96G25 268 aa17.2■□□□□ 0.34
LMNA-208ENST00000448611 TEX101Q9BY14 249 aa17.2■□□□□ 0.34
LMNA-208ENST00000448611 PRKAB1Q9Y478 270 aa17.2■□□□□ 0.34
LMNA-208ENST00000448611 A0A1W2PQF6 199 aa17.19■□□□□ 0.34
LMNA-208ENST00000448611 E7EQ34 232 aa17.19■□□□□ 0.34
LMNA-208ENST00000448611 NPIPB8E9PQR5 432 aa17.19■□□□□ 0.34
LMNA-208ENST00000448611 NME4O00746 187 aa17.19■□□□□ 0.34
LMNA-208ENST00000448611 NVLO15381 856 aaKnown RBP17.19■□□□□ 0.34
LMNA-208ENST00000448611 ADAM23O75077 832 aa17.19■□□□□ 0.34
LMNA-208ENST00000448611 TEAD1P28347 426 aa17.19■□□□□ 0.34
LMNA-208ENST00000448611 YBX1P67809 324 aaKnown RBP17.19■□□□□ 0.34
LMNA-208ENST00000448611 IRF8Q02556 426 aa17.19■□□□□ 0.34
LMNA-208ENST00000448611 TRAP1Q12931 704 aaKnown RBP17.19■□□□□ 0.34
LMNA-208ENST00000448611 NFYCQ13952 458 aa17.19■□□□□ 0.34
LMNA-208ENST00000448611 CAPRIN1Q14444 709 aaKnown RBP17.19■□□□□ 0.34
LMNA-208ENST00000448611 C6orf10Q5SRN2 563 aa17.19■□□□□ 0.34
LMNA-208ENST00000448611 DOK6Q6PKX4 331 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms