RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 PTCHD3Q3KNS1 767 aa18.95■□□□□ 0.62
SGCE-207ENST00000447873 METTL2BQ6P1Q9 378 aaKnown RBP18.95■□□□□ 0.62
SGCE-207ENST00000447873 RPS27LQ71UM5 84 aaKnown RBP18.95■□□□□ 0.62
SGCE-207ENST00000447873 PPFIBP2Q8ND30 876 aa18.95■□□□□ 0.62
SGCE-207ENST00000447873 OR52E1Q8NGJ3 308 aa18.95■□□□□ 0.62
SGCE-207ENST00000447873 ZFPM2Q8WW38 1151 aa18.95■□□□□ 0.62
SGCE-207ENST00000447873 PYCR2Q96C36 320 aa18.95■□□□□ 0.62
SGCE-207ENST00000447873 MED8Q96G25 268 aa18.95■□□□□ 0.62
SGCE-207ENST00000447873 IL17FQ96PD4 163 aa18.95■□□□□ 0.62
SGCE-207ENST00000447873 GTPBP2Q9BX10 602 aaKnown RBP18.95■□□□□ 0.62
SGCE-207ENST00000447873 DRC3Q9H069 523 aa18.95■□□□□ 0.62
SGCE-207ENST00000447873 IL21RQ9HBE5 538 aa18.95■□□□□ 0.62
SGCE-207ENST00000447873 THAP1Q9NVV9 213 aa18.95■□□□□ 0.62
SGCE-207ENST00000447873 OPTCQ9UBM4 332 aa18.95■□□□□ 0.62
SGCE-207ENST00000447873 PCTPQ9UKL6 214 aa18.95■□□□□ 0.62
SGCE-207ENST00000447873 MYO15AQ9UKN7 3530 aa18.95■□□□□ 0.62
SGCE-207ENST00000447873 WDR87Q6ZQQ6 2873 aa18.95■□□□□ 0.62
SGCE-207ENST00000447873 FRYLO94915 3013 aa18.95■□□□□ 0.62
SGCE-207ENST00000447873 ZNF839A8K0R7 811 aa18.94■□□□□ 0.62
SGCE-207ENST00000447873 E2F3O00716 465 aa18.94■□□□□ 0.62
SGCE-207ENST00000447873 WDR47O94967 919 aa18.94■□□□□ 0.62
SGCE-207ENST00000447873 VIMP08670 466 aaKnown RBP18.94■□□□□ 0.62
SGCE-207ENST00000447873 CCT8P50990 548 aa18.94■□□□□ 0.62
SGCE-207ENST00000447873 RAB28P51157 221 aa18.94■□□□□ 0.62
SGCE-207ENST00000447873 CDH13P55290 713 aa18.94■□□□□ 0.62
SGCE-207ENST00000447873 ABCE1P61221 599 aaKnown RBP18.94■□□□□ 0.62
SGCE-207ENST00000447873 UBE2IP63279 158 aaKnown RBP18.94■□□□□ 0.62
SGCE-207ENST00000447873 PLA2G2CQ5R387 149 aa18.94■□□□□ 0.62
SGCE-207ENST00000447873 FRMD7Q6ZUT3 714 aa18.94■□□□□ 0.62
SGCE-207ENST00000447873 LRRC70Q7Z2Q7 622 aa18.94■□□□□ 0.62
SGCE-207ENST00000447873 AVL9Q8NBF6 648 aa18.94■□□□□ 0.62
SGCE-207ENST00000447873 ATOH1Q92858 354 aaPredicted RBP18.94■□□□□ 0.62
SGCE-207ENST00000447873 RAB11FIP5Q9BXF6 653 aa18.94■□□□□ 0.62
SGCE-207ENST00000447873 IRF2BPLQ9H1B7 796 aa18.94■□□□□ 0.62
SGCE-207ENST00000447873 GSTO2Q9H4Y5 243 aa18.94■□□□□ 0.62
SGCE-207ENST00000447873 SLC32A1Q9H598 525 aa18.94■□□□□ 0.62
SGCE-207ENST00000447873 STN1Q9H668 368 aaKnown RBP18.94■□□□□ 0.62
SGCE-207ENST00000447873 ANGPTL3Q9Y5C1 460 aa18.94■□□□□ 0.62
SGCE-207ENST00000447873 E7ENX8 843 aa18.93■□□□□ 0.62
SGCE-207ENST00000447873 K7EPI3 171 aa18.93■□□□□ 0.62
SGCE-207ENST00000447873 ITM2AO43736 263 aa18.93■□□□□ 0.62
SGCE-207ENST00000447873 HSPA4LO95757 839 aa18.93■□□□□ 0.62
SGCE-207ENST00000447873 RETP07949 1114 aa18.93■□□□□ 0.62
SGCE-207ENST00000447873 ENGP17813 658 aa18.93■□□□□ 0.62
SGCE-207ENST00000447873 ATXN3P54252 364 aaPredicted RBP18.93■□□□□ 0.62
SGCE-207ENST00000447873 HHEXQ03014 270 aa18.93■□□□□ 0.62
SGCE-207ENST00000447873 TAP2Q03519 686 aa18.93■□□□□ 0.62
SGCE-207ENST00000447873 CLCQ05315 142 aa18.93■□□□□ 0.62
SGCE-207ENST00000447873 BIRC2Q13490 618 aa18.93■□□□□ 0.62
SGCE-207ENST00000447873 TSTA3Q13630 321 aaPredicted RBP18.93■□□□□ 0.62
SGCE-207ENST00000447873 TCEAL6Q6IPX3 200 aa18.93■□□□□ 0.62
SGCE-207ENST00000447873 OGFOD3Q6PK18 319 aa18.93■□□□□ 0.62
SGCE-207ENST00000447873 GATAD2AQ86YP4 633 aa18.93■□□□□ 0.62
SGCE-207ENST00000447873 ARL14Q8N4G2 192 aa18.93■□□□□ 0.62
SGCE-207ENST00000447873 TEX9Q8N6V9 391 aa18.93■□□□□ 0.62
SGCE-207ENST00000447873 OR2I1PQ8NGU4 316 aa18.93■□□□□ 0.62
SGCE-207ENST00000447873 OR56A3Q8NH54 315 aa18.93■□□□□ 0.62
SGCE-207ENST00000447873 SAP25Q8TEE9 199 aa18.93■□□□□ 0.62
SGCE-207ENST00000447873 ZNF483Q8TF39 744 aaPredicted RBP18.93■□□□□ 0.62
SGCE-207ENST00000447873 LCN9Q8WX39 176 aa18.93■□□□□ 0.62
SGCE-207ENST00000447873 TCEAL3Q969E4 200 aa18.93■□□□□ 0.62
SGCE-207ENST00000447873 NSUN5Q96P11 429 aaKnown RBP18.93■□□□□ 0.62
SGCE-207ENST00000447873 TRMOQ9BU70 441 aa18.93■□□□□ 0.62
SGCE-207ENST00000447873 MENTQ9BUN1 341 aa18.93■□□□□ 0.62
SGCE-207ENST00000447873 ZNF395Q9H8N7 513 aaPredicted RBP18.93■□□□□ 0.62
SGCE-207ENST00000447873 SLCO1B3Q9NPD5 702 aa18.93■□□□□ 0.62
SGCE-207ENST00000447873 SLC22A14Q9Y267 594 aa18.93■□□□□ 0.62
SGCE-207ENST00000447873 PCM1Q15154 2024 aa18.93■□□□□ 0.62
SGCE-207ENST00000447873 NOBOXO60393 691 aa18.93■□□□□ 0.62
SGCE-207ENST00000447873 SNNO75324 88 aaPredicted RBP18.93■□□□□ 0.62
SGCE-207ENST00000447873 LYPLA1O75608 230 aaPredicted RBP18.93■□□□□ 0.62
SGCE-207ENST00000447873 ERGP11308 486 aa18.93■□□□□ 0.62
SGCE-207ENST00000447873 EPB42P16452 691 aa18.93■□□□□ 0.62
SGCE-207ENST00000447873 CCR10P46092 362 aa18.93■□□□□ 0.62
SGCE-207ENST00000447873 PIK3CGP48736 1102 aa18.93■□□□□ 0.62
SGCE-207ENST00000447873 MAZP56270 477 aaKnown RBP18.93■□□□□ 0.62
SGCE-207ENST00000447873 TBPL1P62380 186 aa18.93■□□□□ 0.62
SGCE-207ENST00000447873 GTF2H2Q13888 395 aa18.93■□□□□ 0.62
SGCE-207ENST00000447873 FASTKQ14296 549 aaKnown RBP18.93■□□□□ 0.62
SGCE-207ENST00000447873 GPR18Q14330 331 aa18.93■□□□□ 0.62
SGCE-207ENST00000447873 PLCL1Q15111 1095 aa18.93■□□□□ 0.62
SGCE-207ENST00000447873 CYP2A13Q16696 494 aa18.93■□□□□ 0.62
SGCE-207ENST00000447873 ARL13AQ5H913 290 aaPredicted RBP18.93■□□□□ 0.62
SGCE-207ENST00000447873 C6orf132Q5T0Z8 1188 aa18.93■□□□□ 0.62
SGCE-207ENST00000447873 CAPN13Q6MZZ7 669 aaPredicted RBP18.93■□□□□ 0.62
SGCE-207ENST00000447873 GTF2H2CQ6P1K8 395 aa18.93■□□□□ 0.62
SGCE-207ENST00000447873 FAM47EQ6ZV65 393 aa18.93■□□□□ 0.62
SGCE-207ENST00000447873 GOLGA7Q7Z5G4 137 aa18.93■□□□□ 0.62
SGCE-207ENST00000447873 RBM12BQ8IXT5 1001 aaKnown RBP18.93■□□□□ 0.62
SGCE-207ENST00000447873 SUMF1Q8NBK3 374 aa18.93■□□□□ 0.62
SGCE-207ENST00000447873 TRPC4APQ8TEL6 797 aa18.93■□□□□ 0.62
SGCE-207ENST00000447873 NRTNQ99748 197 aa18.93■□□□□ 0.62
SGCE-207ENST00000447873 PITPNM3Q9BZ71 974 aa18.93■□□□□ 0.62
SGCE-207ENST00000447873 C20orf27Q9GZN8 174 aa18.93■□□□□ 0.62
SGCE-207ENST00000447873 XKR8Q9H6D3 395 aa18.93■□□□□ 0.62
SGCE-207ENST00000447873 EML4Q9HC35 981 aaKnown RBP18.93■□□□□ 0.62
SGCE-207ENST00000447873 SEMA4BQ9NPR2 832 aaPredicted RBP18.93■□□□□ 0.62
SGCE-207ENST00000447873 CCDC177Q9NQR7 707 aaPredicted RBP18.93■□□□□ 0.62
SGCE-207ENST00000447873 ABCF3Q9NUQ8 709 aa18.93■□□□□ 0.62
SGCE-207ENST00000447873 DNAJC11Q9NVH1 559 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms