RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 RAD51AP1Q96B01 352 aa14.33□□□□□ -0.12
HDAC4-204ENST00000446876 ZNF501Q96CX3 271 aaPredicted RBP14.33□□□□□ -0.12
HDAC4-204ENST00000446876 TWSG1Q9GZX9 223 aa14.33□□□□□ -0.12
HDAC4-204ENST00000446876 PDE7BQ9NP56 450 aa14.33□□□□□ -0.12
HDAC4-204ENST00000446876 TRMT6Q9UJA5 497 aaKnown RBP14.33□□□□□ -0.12
HDAC4-204ENST00000446876 COMMD10Q9Y6G5 202 aa14.33□□□□□ -0.12
HDAC4-204ENST00000446876 ANKRD12Q6UB98 2062 aa14.33□□□□□ -0.12
HDAC4-204ENST00000446876 A0A0J9YY10 115 aa14.32□□□□□ -0.12
HDAC4-204ENST00000446876 LOC101059948A0A1B0GTJ6 334 aa14.32□□□□□ -0.12
HDAC4-204ENST00000446876 HCRTR1O43613 425 aa14.32□□□□□ -0.12
HDAC4-204ENST00000446876 PSIP1O75475 530 aaKnown RBP14.32□□□□□ -0.12
HDAC4-204ENST00000446876 LIFP15018 202 aa14.32□□□□□ -0.12
HDAC4-204ENST00000446876 PSMB5P28074 263 aa14.32□□□□□ -0.12
HDAC4-204ENST00000446876 SSTR1P30872 391 aa14.32□□□□□ -0.12
HDAC4-204ENST00000446876 UCNP55089 124 aa14.32□□□□□ -0.12
HDAC4-204ENST00000446876 TUBB4BP68371 445 aa14.32□□□□□ -0.12
HDAC4-204ENST00000446876 VAC14Q08AM6 782 aa14.32□□□□□ -0.12
HDAC4-204ENST00000446876 MGAT5Q09328 741 aa14.32□□□□□ -0.12
HDAC4-204ENST00000446876 TUBB2AQ13885 445 aa14.32□□□□□ -0.12
HDAC4-204ENST00000446876 FASTKQ14296 549 aaKnown RBP14.32□□□□□ -0.12
HDAC4-204ENST00000446876 KIR2DS3Q14952 304 aa14.32□□□□□ -0.12
HDAC4-204ENST00000446876 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.32□□□□□ -0.12
HDAC4-204ENST00000446876 TMTC4Q5T4D3 741 aa14.32□□□□□ -0.12
HDAC4-204ENST00000446876 TTC23LQ6PF05 361 aa14.32□□□□□ -0.12
HDAC4-204ENST00000446876 CDHR3Q6ZTQ4 885 aa14.32□□□□□ -0.12
HDAC4-204ENST00000446876 CCDC25Q86WR0 208 aa14.32□□□□□ -0.12
HDAC4-204ENST00000446876 C19orf47Q8N9M1 422 aaKnown RBP14.32□□□□□ -0.12
HDAC4-204ENST00000446876 GABPB2Q8TAK5 448 aaPredicted RBP14.32□□□□□ -0.12
HDAC4-204ENST00000446876 PYROXD1Q8WU10 500 aa14.32□□□□□ -0.12
HDAC4-204ENST00000446876 TUBB2BQ9BVA1 445 aa14.32□□□□□ -0.12
HDAC4-204ENST00000446876 FAM60AQ9NP50 221 aa14.32□□□□□ -0.12
HDAC4-204ENST00000446876 SMYD2Q9NRG4 433 aa14.32□□□□□ -0.12
HDAC4-204ENST00000446876 ZFATQ9P243 1243 aa14.32□□□□□ -0.12
HDAC4-204ENST00000446876 PCM1Q15154 2024 aa14.31□□□□□ -0.12
HDAC4-204ENST00000446876 ZFYVE26Q68DK2 2539 aa14.31□□□□□ -0.12
HDAC4-204ENST00000446876 TMEM150CB9EJG8 249 aa14.31□□□□□ -0.12
HDAC4-204ENST00000446876 K7ENP7 123 aa14.31□□□□□ -0.12
HDAC4-204ENST00000446876 NTRK1P04629 796 aa14.31□□□□□ -0.12
HDAC4-204ENST00000446876 CCNFP41002 786 aa14.31□□□□□ -0.12
HDAC4-204ENST00000446876 CBLBQ13191 982 aa14.31□□□□□ -0.12
HDAC4-204ENST00000446876 FRG1Q14331 258 aaKnown RBP14.31□□□□□ -0.12
HDAC4-204ENST00000446876 SLC5A12Q1EHB4 618 aa14.31□□□□□ -0.12
HDAC4-204ENST00000446876 HECTD2Q5U5R9 776 aa14.31□□□□□ -0.12
HDAC4-204ENST00000446876 KIAA1614Q5VZ46 1190 aa14.31□□□□□ -0.12
HDAC4-204ENST00000446876 INO80CQ6PI98 192 aaPredicted RBP14.31□□□□□ -0.12
HDAC4-204ENST00000446876 PAQR3Q6TCH7 311 aa14.31□□□□□ -0.12
HDAC4-204ENST00000446876 CYHR1Q6ZMK1 362 aa14.31□□□□□ -0.12
HDAC4-204ENST00000446876 NEK10Q6ZWH5 1172 aa14.31□□□□□ -0.12
HDAC4-204ENST00000446876 GPR155Q7Z3F1 870 aa14.31□□□□□ -0.12
HDAC4-204ENST00000446876 GALNT7Q86SF2 657 aa14.31□□□□□ -0.12
HDAC4-204ENST00000446876 OR1L3Q8NH93 324 aa14.31□□□□□ -0.12
HDAC4-204ENST00000446876 PKP4Q99569 1192 aa14.31□□□□□ -0.12
HDAC4-204ENST00000446876 OLFM1Q99784 485 aa14.31□□□□□ -0.12
HDAC4-204ENST00000446876 TAS2R13Q9NYV9 303 aa14.31□□□□□ -0.12
HDAC4-204ENST00000446876 MOCS1Q9NZB8 636 aa14.31□□□□□ -0.12
HDAC4-204ENST00000446876 KLHL42Q9P2K6 505 aa14.31□□□□□ -0.12
HDAC4-204ENST00000446876 NBEAQ8NFP9 2946 aa14.3□□□□□ -0.12
HDAC4-204ENST00000446876 CXorf49A8MYA2 514 aaPredicted RBP14.3□□□□□ -0.12
HDAC4-204ENST00000446876 KIF2AO00139 706 aaPredicted RBP14.3□□□□□ -0.12
HDAC4-204ENST00000446876 EIF3HO15372 352 aaKnown RBP eCLIP14.3□□□□□ -0.12
HDAC4-204ENST00000446876 SCRG1O75711 98 aa14.3□□□□□ -0.12
HDAC4-204ENST00000446876 CATP04040 527 aaKnown RBP14.3□□□□□ -0.12
HDAC4-204ENST00000446876 CTSBP07858 339 aa14.3□□□□□ -0.12
HDAC4-204ENST00000446876 MPC1LP0DKB6 136 aa14.3□□□□□ -0.12
HDAC4-204ENST00000446876 ENO3P13929 434 aaPredicted RBP14.3□□□□□ -0.12
HDAC4-204ENST00000446876 MAGP20916 626 aa14.3□□□□□ -0.12
HDAC4-204ENST00000446876 GPX6P59796 221 aa14.3□□□□□ -0.12
HDAC4-204ENST00000446876 GUCY2DQ02846 1103 aa14.3□□□□□ -0.12
HDAC4-204ENST00000446876 CYB5D1Q6P9G0 228 aa14.3□□□□□ -0.12
HDAC4-204ENST00000446876 C6orf15Q6UXA7 325 aaPredicted RBP14.3□□□□□ -0.12
HDAC4-204ENST00000446876 STRA8Q7Z7C7 330 aa14.3□□□□□ -0.12
HDAC4-204ENST00000446876 TMEM126BQ8IUX1 230 aa14.3□□□□□ -0.12
HDAC4-204ENST00000446876 PALM2Q8IXS6 379 aa14.3□□□□□ -0.12
HDAC4-204ENST00000446876 MMGT1Q8N4V1 131 aa14.3□□□□□ -0.12
HDAC4-204ENST00000446876 OR9A1PQ8NGU1 263 aa14.3□□□□□ -0.12
HDAC4-204ENST00000446876 KIF18AQ8NI77 898 aa14.3□□□□□ -0.12
HDAC4-204ENST00000446876 MAGEC3Q8TD91 643 aa14.3□□□□□ -0.12
HDAC4-204ENST00000446876 EEF1AKMT1Q8WVE0 214 aa14.3□□□□□ -0.12
HDAC4-204ENST00000446876 RAB11FIP5Q9BXF6 653 aa14.3□□□□□ -0.12
HDAC4-204ENST00000446876 AKIRIN1Q9H9L7 192 aaPredicted RBP14.3□□□□□ -0.12
HDAC4-204ENST00000446876 SPATA7Q9P0W8 599 aa14.3□□□□□ -0.12
HDAC4-204ENST00000446876 ADAMTS6Q9UKP5 1117 aa14.3□□□□□ -0.12
HDAC4-204ENST00000446876 PCDHGA4Q9Y5G9 962 aa14.3□□□□□ -0.12
HDAC4-204ENST00000446876 FER1L5A0AVI2 2057 aa14.29□□□□□ -0.12
HDAC4-204ENST00000446876 A0A1W2PPV9 198 aa14.29□□□□□ -0.12
HDAC4-204ENST00000446876 MYO1CO00159 1063 aa14.29□□□□□ -0.12
HDAC4-204ENST00000446876 PRICKLE3O43900 615 aaPredicted RBP14.29□□□□□ -0.12
HDAC4-204ENST00000446876 NRP2O60462 931 aa14.29□□□□□ -0.12
HDAC4-204ENST00000446876 SYF2O95926 243 aaKnown RBP14.29□□□□□ -0.12
HDAC4-204ENST00000446876 CBSLP0DN79 551 aa14.29□□□□□ -0.12
HDAC4-204ENST00000446876 SAT1P21673 171 aa14.29□□□□□ -0.12
HDAC4-204ENST00000446876 FDXRP22570 491 aa14.29□□□□□ -0.12
HDAC4-204ENST00000446876 MAP4P27816 1152 aaKnown RBP14.29□□□□□ -0.12
HDAC4-204ENST00000446876 CBSP35520 551 aa14.29□□□□□ -0.12
HDAC4-204ENST00000446876 STAT5AP42229 794 aa14.29□□□□□ -0.12
HDAC4-204ENST00000446876 GABRA4P48169 554 aa14.29□□□□□ -0.12
HDAC4-204ENST00000446876 YBX1P67809 324 aaKnown RBP14.29□□□□□ -0.12
HDAC4-204ENST00000446876 CYP4F2P78329 520 aa14.29□□□□□ -0.12
HDAC4-204ENST00000446876 CAV1Q03135 178 aa14.29□□□□□ -0.12
HDAC4-204ENST00000446876 TSTA3Q13630 321 aaPredicted RBP14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms