RNA–Protein interactions for RNA: ENST00000446015.6

AP1S3-208, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene AP1S3, Length 499 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-208ENST00000446015 TNIP1Q15025 636 aa3.36□□□□□ -1.87
AP1S3-208ENST00000446015 RNASEH2BQ5TBB1 312 aaKnown RBP3.36□□□□□ -1.87
AP1S3-208ENST00000446015 C6orf163Q5TEZ5 329 aa3.36□□□□□ -1.87
AP1S3-208ENST00000446015 CAVIN1Q6NZI2 390 aaKnown RBP3.36□□□□□ -1.87
AP1S3-208ENST00000446015 PLXDC2Q6UX71 529 aa3.36□□□□□ -1.87
AP1S3-208ENST00000446015 CEP57L1Q8IYX8 460 aa3.36□□□□□ -1.87
AP1S3-208ENST00000446015 ZFAND2BQ8WV99 257 aa3.36□□□□□ -1.87
AP1S3-208ENST00000446015 SEMA4DQ92854 862 aa3.36□□□□□ -1.87
AP1S3-208ENST00000446015 DESI2Q9BSY9 194 aa3.36□□□□□ -1.87
AP1S3-208ENST00000446015 TUBB2BQ9BVA1 445 aa3.36□□□□□ -1.87
AP1S3-208ENST00000446015 MOV10L1Q9BXT6 1211 aaKnown RBP3.36□□□□□ -1.87
AP1S3-208ENST00000446015 BICC1Q9H694 974 aaKnown RBP3.36□□□□□ -1.87
AP1S3-208ENST00000446015 SLA2Q9H6Q3 261 aa3.36□□□□□ -1.87
AP1S3-208ENST00000446015 TRPC7Q9HCX4 862 aa3.36□□□□□ -1.87
AP1S3-208ENST00000446015 SLC38A7Q9NVC3 462 aa3.36□□□□□ -1.87
AP1S3-208ENST00000446015 COQ3Q9NZJ6 369 aa3.36□□□□□ -1.87
AP1S3-208ENST00000446015 DNAJB9Q9UBS3 223 aa3.36□□□□□ -1.87
AP1S3-208ENST00000446015 C2CD2Q9Y426 696 aa3.36□□□□□ -1.87
AP1S3-208ENST00000446015 NME7Q9Y5B8 376 aa3.36□□□□□ -1.87
AP1S3-208ENST00000446015 DIP2BQ9P265 1576 aa3.36□□□□□ -1.87
AP1S3-208ENST00000446015 CARMIL1Q5VZK9 1371 aa3.36□□□□□ -1.87
AP1S3-208ENST00000446015 SMCHD1A6NHR9 2005 aa3.36□□□□□ -1.87
AP1S3-208ENST00000446015 EEA1Q15075 1411 aa3.36□□□□□ -1.87
AP1S3-208ENST00000446015 PRXQ9BXM0 1461 aa3.35□□□□□ -1.87
AP1S3-208ENST00000446015 KIF21BO75037 1637 aa3.35□□□□□ -1.87
AP1S3-208ENST00000446015 MED19A0JLT2 244 aaPredicted RBP3.35□□□□□ -1.87
AP1S3-208ENST00000446015 ANKUB1A6NFN9 424 aa3.35□□□□□ -1.87
AP1S3-208ENST00000446015 C5orf60A6NFR6 353 aa3.35□□□□□ -1.87
AP1S3-208ENST00000446015 NTN3O00634 580 aaPredicted RBP3.35□□□□□ -1.87
AP1S3-208ENST00000446015 SSX4O60224 188 aa3.35□□□□□ -1.87
AP1S3-208ENST00000446015 SYNCRIPO60506 623 aaKnown RBP3.35□□□□□ -1.87
AP1S3-208ENST00000446015 GCNT3O95395 438 aa3.35□□□□□ -1.87
AP1S3-208ENST00000446015 AMBPP02760 352 aa3.35□□□□□ -1.87
AP1S3-208ENST00000446015 LIPFP07098 398 aa3.35□□□□□ -1.87
AP1S3-208ENST00000446015 FDPSP14324 419 aaKnown RBP3.35□□□□□ -1.87
AP1S3-208ENST00000446015 ERCC2P18074 760 aa3.35□□□□□ -1.87
AP1S3-208ENST00000446015 HOXC13P31276 330 aa3.35□□□□□ -1.87
AP1S3-208ENST00000446015 GABRA5P31644 462 aa3.35□□□□□ -1.87
AP1S3-208ENST00000446015 TNNT3P45378 269 aaPredicted RBP3.35□□□□□ -1.87
AP1S3-208ENST00000446015 MMP15P51511 669 aa3.35□□□□□ -1.87
AP1S3-208ENST00000446015 RPS18P62269 152 aaKnown RBP3.35□□□□□ -1.87
AP1S3-208ENST00000446015 RBPJQ06330 500 aa3.35□□□□□ -1.87
AP1S3-208ENST00000446015 ACSM1Q08AH1 577 aa3.35□□□□□ -1.87
AP1S3-208ENST00000446015 PLA2G7Q13093 441 aa3.35□□□□□ -1.87
AP1S3-208ENST00000446015 ZC2HC1CQ53FD0 456 aaPredicted RBP3.35□□□□□ -1.87
AP1S3-208ENST00000446015 ZRANB3Q5FWF4 1079 aa3.35□□□□□ -1.87
AP1S3-208ENST00000446015 C6orf136Q5SQH8 315 aa3.35□□□□□ -1.87
AP1S3-208ENST00000446015 GCNT6Q5T4J0 391 aa3.35□□□□□ -1.87
AP1S3-208ENST00000446015 GRTP1Q5TC63 336 aa3.35□□□□□ -1.87
AP1S3-208ENST00000446015 ARHGAP11AQ6P4F7 1023 aa3.35□□□□□ -1.87
AP1S3-208ENST00000446015 MFSD6Q6ZSS7 791 aa3.35□□□□□ -1.87
AP1S3-208ENST00000446015 DGLUCYQ7Z3D6 616 aa3.35□□□□□ -1.87
AP1S3-208ENST00000446015 TRPT1Q86TN4 253 aaKnown RBP3.35□□□□□ -1.87
AP1S3-208ENST00000446015 TMEM173Q86WV6 379 aaPredicted RBP3.35□□□□□ -1.87
AP1S3-208ENST00000446015 PTOV1Q86YD1 416 aa3.35□□□□□ -1.87
AP1S3-208ENST00000446015 APLFQ8IW19 511 aaPredicted RBP3.35□□□□□ -1.87
AP1S3-208ENST00000446015 ZNF248Q8NDW4 579 aa3.35□□□□□ -1.87
AP1S3-208ENST00000446015 OR2AJ1Q8NGZ0 328 aa3.35□□□□□ -1.87
AP1S3-208ENST00000446015 EXD1Q8NHP7 514 aa3.35□□□□□ -1.87
AP1S3-208ENST00000446015 OCC1Q8TAD7 63 aa3.35□□□□□ -1.87
AP1S3-208ENST00000446015 HCAR2Q8TDS4 363 aa3.35□□□□□ -1.87
AP1S3-208ENST00000446015 CORO2AQ92828 525 aa3.35□□□□□ -1.87
AP1S3-208ENST00000446015 NXNL1Q96CM4 212 aa3.35□□□□□ -1.87
AP1S3-208ENST00000446015 PRMT6Q96LA8 375 aaPredicted RBP3.35□□□□□ -1.87
AP1S3-208ENST00000446015 FAM81BQ96LP2 452 aa3.35□□□□□ -1.87
AP1S3-208ENST00000446015 ZNF582Q96NG8 517 aaPredicted RBP3.35□□□□□ -1.87
AP1S3-208ENST00000446015 SPAG5Q96R06 1193 aa3.35□□□□□ -1.87
AP1S3-208ENST00000446015 PITPNM3Q9BZ71 974 aa3.35□□□□□ -1.87
AP1S3-208ENST00000446015 DPAGT1Q9H3H5 408 aa3.35□□□□□ -1.87
AP1S3-208ENST00000446015 FZD8Q9H461 694 aa3.35□□□□□ -1.87
AP1S3-208ENST00000446015 HHATLQ9HCP6 504 aa3.35□□□□□ -1.87
AP1S3-208ENST00000446015 XAB2Q9HCS7 855 aaKnown RBP3.35□□□□□ -1.87
AP1S3-208ENST00000446015 ARGLU1Q9NWB6 273 aaPredicted RBP3.35□□□□□ -1.87
AP1S3-208ENST00000446015 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.35□□□□□ -1.87
AP1S3-208ENST00000446015 ABCC2Q92887 1545 aa3.34□□□□□ -1.87
AP1S3-208ENST00000446015 DISP1Q96F81 1524 aa3.34□□□□□ -1.87
AP1S3-208ENST00000446015 TRAV34A0A0B4J273 112 aa3.34□□□□□ -1.87
AP1S3-208ENST00000446015 ANXA2P2A6NMY6 339 aa3.34□□□□□ -1.87
AP1S3-208ENST00000446015 ZG16O60844 167 aa3.34□□□□□ -1.87
AP1S3-208ENST00000446015 DIAPH2O60879 1101 aa3.34□□□□□ -1.87
AP1S3-208ENST00000446015 TGDSO95455 350 aa3.34□□□□□ -1.87
AP1S3-208ENST00000446015 PENKP01210 267 aaPredicted RBP3.34□□□□□ -1.87
AP1S3-208ENST00000446015 IGLV1-44P01699 117 aa3.34□□□□□ -1.87
AP1S3-208ENST00000446015 APOHP02749 345 aaPredicted RBP3.34□□□□□ -1.87
AP1S3-208ENST00000446015 ATP5BP06576 529 aaKnown RBP3.34□□□□□ -1.87
AP1S3-208ENST00000446015 ZFYP08048 801 aaPredicted RBP3.34□□□□□ -1.87
AP1S3-208ENST00000446015 RAB40ALP0C0E4 278 aa3.34□□□□□ -1.87
AP1S3-208ENST00000446015 OR52Z1P0C646 297 aa3.34□□□□□ -1.87
AP1S3-208ENST00000446015 ADRA2CP18825 462 aa3.34□□□□□ -1.87
AP1S3-208ENST00000446015 ITGA3P26006 1051 aa3.34□□□□□ -1.87
AP1S3-208ENST00000446015 CHRNB4P30926 498 aa3.34□□□□□ -1.87
AP1S3-208ENST00000446015 PCGF2P35227 344 aa3.34□□□□□ -1.87
AP1S3-208ENST00000446015 PSMC4P43686 418 aa3.34□□□□□ -1.87
AP1S3-208ENST00000446015 LINC01547P58512 204 aaPredicted RBP3.34□□□□□ -1.87
AP1S3-208ENST00000446015 PRKCZQ05513 592 aa3.34□□□□□ -1.87
AP1S3-208ENST00000446015 ITGA9Q13797 1035 aa3.34□□□□□ -1.87
AP1S3-208ENST00000446015 TAF13Q15543 124 aa3.34□□□□□ -1.87
AP1S3-208ENST00000446015 TYSND1Q2T9J0 566 aa3.34□□□□□ -1.87
AP1S3-208ENST00000446015 PRR27Q6MZM9 219 aa3.34□□□□□ -1.87
AP1S3-208ENST00000446015 PLBD1Q6P4A8 553 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms