RNA–Protein interactions for RNA: ENST00000445561.5

TRO-215, Transcript of trophinin, humanhuman

TSL 1 (best)

Gene TRO, Length 2,597 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRO-215ENST00000445561 CPPED1Q9BRF8 314 aaPredicted RBP12.29□□□□□ -0.44
TRO-215ENST00000445561 RBM4Q9BWF3 364 aaKnown RBP12.29□□□□□ -0.44
TRO-215ENST00000445561 SLC32A1Q9H598 525 aa12.29□□□□□ -0.44
TRO-215ENST00000445561 ELOVL6Q9H5J4 265 aa12.29□□□□□ -0.44
TRO-215ENST00000445561 VNN3Q9NY84 501 aa12.29□□□□□ -0.44
TRO-215ENST00000445561 CD84Q9UIB8 345 aa12.29□□□□□ -0.44
TRO-215ENST00000445561 INTS6Q9UL03 887 aaKnown RBP12.29□□□□□ -0.44
TRO-215ENST00000445561 NUP214P35658 2090 aaPredicted RBP12.29□□□□□ -0.44
TRO-215ENST00000445561 NRG2O14511 850 aaPredicted RBP12.28□□□□□ -0.44
TRO-215ENST00000445561 MTX2O75431 263 aa12.28□□□□□ -0.44
TRO-215ENST00000445561 KRT6AP02538 564 aa12.28□□□□□ -0.44
TRO-215ENST00000445561 KRT6BP04259 564 aa12.28□□□□□ -0.44
TRO-215ENST00000445561 LHCGRP22888 699 aa12.28□□□□□ -0.44
TRO-215ENST00000445561 S100A3P33764 101 aa12.28□□□□□ -0.44
TRO-215ENST00000445561 NSG1P42857 185 aa12.28□□□□□ -0.44
TRO-215ENST00000445561 NRIP1P48552 1158 aa12.28□□□□□ -0.44
TRO-215ENST00000445561 KRT6CP48668 564 aa12.28□□□□□ -0.44
TRO-215ENST00000445561 GZMMP51124 257 aa12.28□□□□□ -0.44
TRO-215ENST00000445561 PLA2G16P53816 162 aa12.28□□□□□ -0.44
TRO-215ENST00000445561 PTSQ03393 145 aa12.28□□□□□ -0.44
TRO-215ENST00000445561 GPR33Q49SQ1 333 aa12.28□□□□□ -0.44
TRO-215ENST00000445561 RBM48Q5RL73 367 aaKnown RBP12.28□□□□□ -0.44
TRO-215ENST00000445561 LYPLAL1Q5VWZ2 237 aa12.28□□□□□ -0.44
TRO-215ENST00000445561 GALNT5Q7Z7M9 940 aa12.28□□□□□ -0.44
TRO-215ENST00000445561 CROCCP3Q8IVE0 287 aa12.28□□□□□ -0.44
TRO-215ENST00000445561 EID3Q8N140 333 aa12.28□□□□□ -0.44
TRO-215ENST00000445561 CHCHD4Q8N4Q1 142 aa12.28□□□□□ -0.44
TRO-215ENST00000445561 TERB1Q8NA31 727 aa12.28□□□□□ -0.44
TRO-215ENST00000445561 VOPP1Q96AW1 172 aa12.28□□□□□ -0.44
TRO-215ENST00000445561 COPS8Q99627 209 aa12.28□□□□□ -0.44
TRO-215ENST00000445561 BARD1Q99728 777 aaKnown RBP12.28□□□□□ -0.44
TRO-215ENST00000445561 EBPLQ9BY08 206 aa12.28□□□□□ -0.44
TRO-215ENST00000445561 HMX1Q9NP08 348 aaPredicted RBP12.28□□□□□ -0.44
TRO-215ENST00000445561 IRAK4Q9NWZ3 460 aa12.28□□□□□ -0.44
TRO-215ENST00000445561 KCTD5Q9NXV2 234 aa12.28□□□□□ -0.44
TRO-215ENST00000445561 FBXO10Q9UK96 956 aa12.28□□□□□ -0.44
TRO-215ENST00000445561 PRRC2BQ5JSZ5 2229 aaKnown RBP12.28□□□□□ -0.44
TRO-215ENST00000445561 LOC100130705A0A1B0GUX0 176 aa12.28□□□□□ -0.44
TRO-215ENST00000445561 TRIM64BA6NI03 449 aa12.28□□□□□ -0.44
TRO-215ENST00000445561 MITFO75030 526 aaPredicted RBP12.28□□□□□ -0.44
TRO-215ENST00000445561 SOCS5O75159 536 aa12.28□□□□□ -0.44
TRO-215ENST00000445561 IGSF6O95976 241 aa12.28□□□□□ -0.44
TRO-215ENST00000445561 SOD2P04179 222 aa12.28□□□□□ -0.44
TRO-215ENST00000445561 CKMP06732 381 aa12.28□□□□□ -0.44
TRO-215ENST00000445561 SDC1P18827 310 aa12.28□□□□□ -0.44
TRO-215ENST00000445561 ITPKAP23677 461 aa12.28□□□□□ -0.44
TRO-215ENST00000445561 SERPINA4P29622 427 aa12.28□□□□□ -0.44
TRO-215ENST00000445561 GRSF1Q12849 480 aaKnown RBP eCLIP12.28□□□□□ -0.44
TRO-215ENST00000445561 BOP1Q14137 746 aaKnown RBP12.28□□□□□ -0.44
TRO-215ENST00000445561 SKIV2LQ15477 1246 aaKnown RBP12.28□□□□□ -0.44
TRO-215ENST00000445561 DPY19L1Q2PZI1 675 aa12.28□□□□□ -0.44
TRO-215ENST00000445561 SMU1Q2TAY7 513 aa12.28□□□□□ -0.44
TRO-215ENST00000445561 NEK5Q6P3R8 708 aa12.28□□□□□ -0.44
TRO-215ENST00000445561 ADHFE1Q8IWW8 467 aa12.28□□□□□ -0.44
TRO-215ENST00000445561 SVOPLQ8N434 492 aa12.28□□□□□ -0.44
TRO-215ENST00000445561 PJA1Q8NG27 643 aa12.28□□□□□ -0.44
TRO-215ENST00000445561 OR2AP1Q8NGE2 309 aa12.28□□□□□ -0.44
TRO-215ENST00000445561 HDAC2Q92769 488 aaKnown RBP12.28□□□□□ -0.44
TRO-215ENST00000445561 APOLD1Q96LR9 279 aa12.28□□□□□ -0.44
TRO-215ENST00000445561 SMG9Q9H0W8 520 aaKnown RBP12.28□□□□□ -0.44
TRO-215ENST00000445561 PAK1IP1Q9NWT1 392 aaPredicted RBP12.28□□□□□ -0.44
TRO-215ENST00000445561 ASIC5Q9NY37 505 aa12.28□□□□□ -0.44
TRO-215ENST00000445561 CFAP97Q9P2B7 532 aa12.28□□□□□ -0.44
TRO-215ENST00000445561 FAM8A1Q9UBU6 413 aa12.28□□□□□ -0.44
TRO-215ENST00000445561 AASSQ9UDR5 926 aa12.28□□□□□ -0.44
TRO-215ENST00000445561 WARS2Q9UGM6 360 aaKnown RBP12.28□□□□□ -0.44
TRO-215ENST00000445561 SCN8AQ9UQD0 1980 aa12.28□□□□□ -0.44
TRO-215ENST00000445561 FAM220BPB1ANY3 271 aa12.27□□□□□ -0.44
TRO-215ENST00000445561 J3QRK9 145 aa12.27□□□□□ -0.44
TRO-215ENST00000445561 MAN1A2O60476 641 aa12.27□□□□□ -0.44
TRO-215ENST00000445561 PRAMEF4O60810 478 aa12.27□□□□□ -0.44
TRO-215ENST00000445561 XYLBO75191 536 aa12.27□□□□□ -0.44
TRO-215ENST00000445561 ZNF682O95780 498 aa12.27□□□□□ -0.44
TRO-215ENST00000445561 RETP07949 1114 aa12.27□□□□□ -0.44
TRO-215ENST00000445561 JUNBP17275 347 aaPredicted RBP12.27□□□□□ -0.44
TRO-215ENST00000445561 GJA1P17302 382 aa12.27□□□□□ -0.44
TRO-215ENST00000445561 PTPN6P29350 595 aa12.27□□□□□ -0.44
TRO-215ENST00000445561 EPHB3P54753 998 aa12.27□□□□□ -0.44
TRO-215ENST00000445561 TMBIM6P55061 237 aa12.27□□□□□ -0.44
TRO-215ENST00000445561 CLDN8P56748 225 aa12.27□□□□□ -0.44
TRO-215ENST00000445561 PTCHD3Q3KNS1 767 aa12.27□□□□□ -0.44
TRO-215ENST00000445561 PRAMEF9Q5VWM5 478 aa12.27□□□□□ -0.44
TRO-215ENST00000445561 ATG9BQ674R7 924 aa12.27□□□□□ -0.44
TRO-215ENST00000445561 TPGS2Q68CL5 300 aa12.27□□□□□ -0.44
TRO-215ENST00000445561 OR4F3Q6IEY1 312 aa12.27□□□□□ -0.44
TRO-215ENST00000445561 DOK6Q6PKX4 331 aa12.27□□□□□ -0.44
TRO-215ENST00000445561 CALHM3Q86XJ0 350 aa12.27□□□□□ -0.44
TRO-215ENST00000445561 PLPP6Q8IY26 295 aa12.27□□□□□ -0.44
TRO-215ENST00000445561 TMEM132CQ8N3T6 1108 aa12.27□□□□□ -0.44
TRO-215ENST00000445561 CNIH3Q8TBE1 160 aa12.27□□□□□ -0.44
TRO-215ENST00000445561 FBXL8Q96CD0 374 aa12.27□□□□□ -0.44
TRO-215ENST00000445561 CCDC138Q96M89 665 aa12.27□□□□□ -0.44
TRO-215ENST00000445561 SLC29A3Q9BZD2 475 aa12.27□□□□□ -0.44
TRO-215ENST00000445561 ATG10Q9H0Y0 220 aa12.27□□□□□ -0.44
TRO-215ENST00000445561 KCNH6Q9H252 994 aa12.27□□□□□ -0.44
TRO-215ENST00000445561 IL21Q9HBE4 155 aa12.27□□□□□ -0.44
TRO-215ENST00000445561 ZDHHC3Q9NYG2 299 aa12.27□□□□□ -0.44
TRO-215ENST00000445561 USE1Q9NZ43 259 aa12.27□□□□□ -0.44
TRO-215ENST00000445561 LMCD1Q9NZU5 365 aa12.27□□□□□ -0.44
TRO-215ENST00000445561 PCDH10Q9P2E7 1040 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms