RNA–Protein interactions for RNA: ENST00000444502.5

TOP3B-210, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 4,163 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-210ENST00000444502 NIPAL1Q6NVV3 410 aa10.36□□□□□ -0.75
TOP3B-210ENST00000444502 ENPP7Q6UWV6 458 aa10.36□□□□□ -0.75
TOP3B-210ENST00000444502 VASH1Q7L8A9 365 aaPredicted RBP10.36□□□□□ -0.75
TOP3B-210ENST00000444502 UBE2Q1Q7Z7E8 422 aa10.36□□□□□ -0.75
TOP3B-210ENST00000444502 ADCY4Q8NFM4 1077 aa10.36□□□□□ -0.75
TOP3B-210ENST00000444502 PSKH2Q96QS6 385 aa10.36□□□□□ -0.75
TOP3B-210ENST00000444502 BDH2Q9BUT1 245 aa10.36□□□□□ -0.75
TOP3B-210ENST00000444502 CXorf21Q9HAI6 301 aa10.36□□□□□ -0.75
TOP3B-210ENST00000444502 COMMD8Q9NX08 183 aa10.36□□□□□ -0.75
TOP3B-210ENST00000444502 FNIP2Q9P278 1114 aa10.36□□□□□ -0.75
TOP3B-210ENST00000444502 SNX6Q9UNH7 406 aa10.36□□□□□ -0.75
TOP3B-210ENST00000444502 SLC27A6Q9Y2P4 619 aa10.36□□□□□ -0.75
TOP3B-210ENST00000444502 BRWD1Q9NSI6 2320 aa10.36□□□□□ -0.75
TOP3B-210ENST00000444502 KAT7O95251 611 aa10.36□□□□□ -0.75
TOP3B-210ENST00000444502 PAPSS2O95340 614 aaPredicted RBP10.36□□□□□ -0.75
TOP3B-210ENST00000444502 EFNA1P20827 205 aaPredicted RBP10.36□□□□□ -0.75
TOP3B-210ENST00000444502 RPL34P49207 117 aaKnown RBP10.36□□□□□ -0.75
TOP3B-210ENST00000444502 TUBA1BP68363 451 aa10.36□□□□□ -0.75
TOP3B-210ENST00000444502 PHC1P78364 1004 aa10.36□□□□□ -0.75
TOP3B-210ENST00000444502 ADGRE1Q14246 886 aa10.36□□□□□ -0.75
TOP3B-210ENST00000444502 DEPDC1Q5TB30 811 aa10.36□□□□□ -0.75
TOP3B-210ENST00000444502 TUBA1AQ71U36 451 aa10.36□□□□□ -0.75
TOP3B-210ENST00000444502 TRIM43Q96BQ3 446 aaPredicted RBP10.36□□□□□ -0.75
TOP3B-210ENST00000444502 MRM3Q9HC36 420 aaKnown RBP10.36□□□□□ -0.75
TOP3B-210ENST00000444502 INTS10Q9NVR2 710 aaKnown RBP10.36□□□□□ -0.75
TOP3B-210ENST00000444502 RAB23Q9ULC3 237 aa10.36□□□□□ -0.75
TOP3B-210ENST00000444502 A0A1W2PP55 124 aa10.36□□□□□ -0.75
TOP3B-210ENST00000444502 B4GALT3O60512 393 aa10.36□□□□□ -0.75
TOP3B-210ENST00000444502 GUCY1B2O75343 617 aa10.36□□□□□ -0.75
TOP3B-210ENST00000444502 ESR1P03372 595 aa10.36□□□□□ -0.75
TOP3B-210ENST00000444502 RB1P06400 928 aa10.36□□□□□ -0.75
TOP3B-210ENST00000444502 CEBPBP17676 345 aa10.36□□□□□ -0.75
TOP3B-210ENST00000444502 NR4A2P43354 598 aa10.36□□□□□ -0.75
TOP3B-210ENST00000444502 RGRP47804 291 aa10.36□□□□□ -0.75
TOP3B-210ENST00000444502 CDK9P50750 372 aaKnown RBP10.36□□□□□ -0.75
TOP3B-210ENST00000444502 TGM3Q08188 693 aa10.36□□□□□ -0.75
TOP3B-210ENST00000444502 ADCK1Q86TW2 530 aa10.36□□□□□ -0.75
TOP3B-210ENST00000444502 ISCA2Q86U28 154 aa10.36□□□□□ -0.75
TOP3B-210ENST00000444502 HORMAD1Q86X24 394 aa10.36□□□□□ -0.75
TOP3B-210ENST00000444502 OR2T34Q8NGX1 318 aa10.36□□□□□ -0.75
TOP3B-210ENST00000444502 OR2T3Q8NH03 318 aa10.36□□□□□ -0.75
TOP3B-210ENST00000444502 FGF13Q92913 245 aa10.36□□□□□ -0.75
TOP3B-210ENST00000444502 CLP1Q92989 425 aaKnown RBP10.36□□□□□ -0.75
TOP3B-210ENST00000444502 C9orf16Q9BUW7 83 aa10.36□□□□□ -0.75
TOP3B-210ENST00000444502 ABCG4Q9H172 646 aa10.36□□□□□ -0.75
TOP3B-210ENST00000444502 ZNF334Q9HCZ1 680 aaPredicted RBP10.36□□□□□ -0.75
TOP3B-210ENST00000444502 C12orf4Q9NQ89 552 aa10.36□□□□□ -0.75
TOP3B-210ENST00000444502 TEKT2Q9UIF3 430 aa10.36□□□□□ -0.75
TOP3B-210ENST00000444502 ZNF490Q9ULM2 529 aaPredicted RBP10.36□□□□□ -0.75
TOP3B-210ENST00000444502 A0A0G2JN53 185 aa10.36□□□□□ -0.75
TOP3B-210ENST00000444502 TNFRSF10BO14763 440 aa10.36□□□□□ -0.75
TOP3B-210ENST00000444502 HNRNPA1P09651 372 aaKnown RBP eCLIP10.36□□□□□ -0.75
TOP3B-210ENST00000444502 UROSP10746 265 aa10.36□□□□□ -0.75
TOP3B-210ENST00000444502 CD1DP15813 335 aa10.36□□□□□ -0.75
TOP3B-210ENST00000444502 ZNF182P17025 639 aaPredicted RBP10.36□□□□□ -0.75
TOP3B-210ENST00000444502 GNPDA1P46926 289 aa10.36□□□□□ -0.75
TOP3B-210ENST00000444502 ACADVLP49748 655 aa10.36□□□□□ -0.75
TOP3B-210ENST00000444502 DGKQP52824 942 aa10.36□□□□□ -0.75
TOP3B-210ENST00000444502 LSM3P62310 102 aaKnown RBP10.36□□□□□ -0.75
TOP3B-210ENST00000444502 GTF2H2Q13888 395 aa10.36□□□□□ -0.75
TOP3B-210ENST00000444502 OR4D1Q15615 310 aa10.36□□□□□ -0.75
TOP3B-210ENST00000444502 ZNF829Q3KNS6 432 aaPredicted RBP10.36□□□□□ -0.75
TOP3B-210ENST00000444502 GTF2H2CQ6P1K8 395 aa10.36□□□□□ -0.75
TOP3B-210ENST00000444502 CCDC81Q6ZN84 652 aa10.36□□□□□ -0.75
TOP3B-210ENST00000444502 TMEM26Q6ZUK4 368 aa10.36□□□□□ -0.75
TOP3B-210ENST00000444502 C17orf64Q86WR6 236 aa10.36□□□□□ -0.75
TOP3B-210ENST00000444502 CBR4Q8N4T8 237 aa10.36□□□□□ -0.75
TOP3B-210ENST00000444502 OR13J1Q8NGT2 312 aa10.36□□□□□ -0.75
TOP3B-210ENST00000444502 SPPL2AQ8TCT8 520 aa10.36□□□□□ -0.75
TOP3B-210ENST00000444502 LINC01599Q8WXQ3 324 aa10.36□□□□□ -0.75
TOP3B-210ENST00000444502 PTERQ96BW5 349 aa10.36□□□□□ -0.75
TOP3B-210ENST00000444502 DEPDC7Q96QD5 511 aa10.36□□□□□ -0.75
TOP3B-210ENST00000444502 HOPXQ9BPY8 73 aaPredicted RBP10.36□□□□□ -0.75
TOP3B-210ENST00000444502 POLE4Q9NR33 117 aa10.36□□□□□ -0.75
TOP3B-210ENST00000444502 IGSF5Q9NSI5 407 aa10.36□□□□□ -0.75
TOP3B-210ENST00000444502 KCNK6Q9Y257 313 aa10.36□□□□□ -0.75
TOP3B-210ENST00000444502 SPTA1P02549 2419 aa10.35□□□□□ -0.75
TOP3B-210ENST00000444502 A0A087WXM4 84 aa10.35□□□□□ -0.75
TOP3B-210ENST00000444502 A0A1B0GTW7 788 aa10.35□□□□□ -0.75
TOP3B-210ENST00000444502 TRIM24O15164 1050 aa10.35□□□□□ -0.75
TOP3B-210ENST00000444502 SMAD6O43541 496 aaKnown RBP10.35□□□□□ -0.75
TOP3B-210ENST00000444502 KERAO60938 352 aa10.35□□□□□ -0.75
TOP3B-210ENST00000444502 HPGDP15428 266 aa10.35□□□□□ -0.75
TOP3B-210ENST00000444502 POU1F1P28069 291 aa10.35□□□□□ -0.75
TOP3B-210ENST00000444502 SLC6A4P31645 630 aa10.35□□□□□ -0.75
TOP3B-210ENST00000444502 ARCN1P48444 511 aaKnown RBP10.35□□□□□ -0.75
TOP3B-210ENST00000444502 PXNP49023 591 aaPredicted RBP10.35□□□□□ -0.75
TOP3B-210ENST00000444502 MTPNP58546 118 aa10.35□□□□□ -0.75
TOP3B-210ENST00000444502 DAB2P98082 770 aa10.35□□□□□ -0.75
TOP3B-210ENST00000444502 GLYATQ6IB77 296 aa10.35□□□□□ -0.75
TOP3B-210ENST00000444502 CYP20A1Q6UW02 462 aa10.35□□□□□ -0.75
TOP3B-210ENST00000444502 RSPO2Q6UXX9 243 aaPredicted RBP10.35□□□□□ -0.75
TOP3B-210ENST00000444502 ANKRD46Q86W74 232 aa10.35□□□□□ -0.75
TOP3B-210ENST00000444502 SNX29P2Q8IUI4 249 aa10.35□□□□□ -0.75
TOP3B-210ENST00000444502 NUS1Q96E22 293 aa10.35□□□□□ -0.75
TOP3B-210ENST00000444502 PPP3R2Q96LZ3 170 aa10.35□□□□□ -0.75
TOP3B-210ENST00000444502 C12orf66Q96MD2 445 aa10.35□□□□□ -0.75
TOP3B-210ENST00000444502 TMEM74Q96NL1 305 aa10.35□□□□□ -0.75
TOP3B-210ENST00000444502 CRISPLD1Q9H336 500 aa10.35□□□□□ -0.75
TOP3B-210ENST00000444502 WDR26Q9H7D7 661 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms