RNA–Protein interactions for RNA: ENST00000444481.3

VCX3B-203, Transcript of variable charge X-linked 3B, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3B, Length 812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3B-203ENST00000444481 DNAJC22Q8N4W6 341 aa17.55■□□□□ 0.4
VCX3B-203ENST00000444481 NAT8LQ8N9F0 302 aa17.55■□□□□ 0.4
VCX3B-203ENST00000444481 SKA2Q8WVK7 121 aaPredicted RBP17.55■□□□□ 0.4
VCX3B-203ENST00000444481 KCNF1Q9H3M0 494 aa17.55■□□□□ 0.4
VCX3B-203ENST00000444481 INTS7Q9NVH2 962 aaKnown RBP17.55■□□□□ 0.4
VCX3B-203ENST00000444481 ANAPC2Q9UJX6 822 aa17.55■□□□□ 0.4
VCX3B-203ENST00000444481 SNX7Q9UNH6 387 aa17.55■□□□□ 0.4
VCX3B-203ENST00000444481 SRPK3Q9UPE1 567 aa17.55■□□□□ 0.4
VCX3B-203ENST00000444481 PLCL2Q9UPR0 1127 aa17.55■□□□□ 0.4
VCX3B-203ENST00000444481 CRYL1Q9Y2S2 319 aa17.55■□□□□ 0.4
VCX3B-203ENST00000444481 C9J4A7 227 aa17.54■□□□□ 0.4
VCX3B-203ENST00000444481 RFPL1O75677 317 aa17.54■□□□□ 0.4
VCX3B-203ENST00000444481 C1orf105O95561 183 aa17.54■□□□□ 0.4
VCX3B-203ENST00000444481 CAPN1P07384 714 aa17.54■□□□□ 0.4
VCX3B-203ENST00000444481 CD63P08962 238 aa17.54■□□□□ 0.4
VCX3B-203ENST00000444481 PKMP14618 531 aaKnown RBP17.54■□□□□ 0.4
VCX3B-203ENST00000444481 TCP1P17987 556 aaKnown RBP17.54■□□□□ 0.4
VCX3B-203ENST00000444481 CHRM3P20309 590 aa17.54■□□□□ 0.4
VCX3B-203ENST00000444481 RPS18P62269 152 aaKnown RBP17.54■□□□□ 0.4
VCX3B-203ENST00000444481 THOC5Q13769 683 aaKnown RBP17.54■□□□□ 0.4
VCX3B-203ENST00000444481 GBX1Q14549 363 aa17.54■□□□□ 0.4
VCX3B-203ENST00000444481 KCTD19Q17RG1 926 aaPredicted RBP17.54■□□□□ 0.4
VCX3B-203ENST00000444481 RHBDD2Q6NTF9 364 aa17.54■□□□□ 0.4
VCX3B-203ENST00000444481 TCTN3Q6NUS6 607 aa17.54■□□□□ 0.4
VCX3B-203ENST00000444481 CENPUQ71F23 418 aa17.54■□□□□ 0.4
VCX3B-203ENST00000444481 PPIL6Q8IXY8 311 aa17.54■□□□□ 0.4
VCX3B-203ENST00000444481 ENDOVQ8N8Q3 282 aaKnown RBP17.54■□□□□ 0.4
VCX3B-203ENST00000444481 HMGCLL1Q8TB92 370 aa17.54■□□□□ 0.4
VCX3B-203ENST00000444481 PROKR1Q8TCW9 393 aa17.54■□□□□ 0.4
VCX3B-203ENST00000444481 ANP32BQ92688 251 aaKnown RBP17.54■□□□□ 0.4
VCX3B-203ENST00000444481 ZNF669Q96BR6 464 aaPredicted RBP17.54■□□□□ 0.4
VCX3B-203ENST00000444481 DHRS4Q9BTZ2 278 aa17.54■□□□□ 0.4
VCX3B-203ENST00000444481 TRMT1Q9NXH9 659 aaKnown RBP17.54■□□□□ 0.4
VCX3B-203ENST00000444481 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.54■□□□□ 0.4
VCX3B-203ENST00000444481 TCFL5Q9UL49 500 aa17.54■□□□□ 0.4
VCX3B-203ENST00000444481 ZCWPW2A0A1B0GU75 182 aa17.53■□□□□ 0.4
VCX3B-203ENST00000444481 E5RI56 91 aa17.53■□□□□ 0.4
VCX3B-203ENST00000444481 GOLGA8MH3BSY2 632 aa17.53■□□□□ 0.4
VCX3B-203ENST00000444481 ZSCAN9O15535 394 aaPredicted RBP17.53■□□□□ 0.4
VCX3B-203ENST00000444481 PRICKLE3O43900 615 aaPredicted RBP17.53■□□□□ 0.4
VCX3B-203ENST00000444481 NIPSNAP2O75323 286 aa17.53■□□□□ 0.4
VCX3B-203ENST00000444481 USP1O94782 785 aa17.53■□□□□ 0.4
VCX3B-203ENST00000444481 MATN4O95460 622 aa17.53■□□□□ 0.4
VCX3B-203ENST00000444481 MAGP20916 626 aa17.53■□□□□ 0.4
VCX3B-203ENST00000444481 NFKB2Q00653 900 aa17.53■□□□□ 0.4
VCX3B-203ENST00000444481 PPP1R7Q15435 360 aa17.53■□□□□ 0.4
VCX3B-203ENST00000444481 SF1Q15637 639 aaKnown RBP17.53■□□□□ 0.4
VCX3B-203ENST00000444481 LACTB2Q53H82 288 aaPredicted RBP17.53■□□□□ 0.4
VCX3B-203ENST00000444481 ZNF385CQ66K41 422 aaPredicted RBP17.53■□□□□ 0.4
VCX3B-203ENST00000444481 LCN10Q6JVE6 187 aa17.53■□□□□ 0.4
VCX3B-203ENST00000444481 FAM198BQ6UWH4 519 aa17.53■□□□□ 0.4
VCX3B-203ENST00000444481 CALML6Q8TD86 181 aa17.53■□□□□ 0.4
VCX3B-203ENST00000444481 DENND1AQ8TEH3 1009 aa17.53■□□□□ 0.4
VCX3B-203ENST00000444481 ZUFSPQ96AP4 578 aa17.53■□□□□ 0.4
VCX3B-203ENST00000444481 SIGLEC10Q96LC7 697 aa17.53■□□□□ 0.4
VCX3B-203ENST00000444481 IL17FQ96PD4 163 aa17.53■□□□□ 0.4
VCX3B-203ENST00000444481 SPRTNQ9H040 489 aaPredicted RBP17.53■□□□□ 0.4
VCX3B-203ENST00000444481 ZNF71Q9NQZ8 489 aaPredicted RBP17.53■□□□□ 0.4
VCX3B-203ENST00000444481 SPATA7Q9P0W8 599 aa17.53■□□□□ 0.4
VCX3B-203ENST00000444481 KLHL42Q9P2K6 505 aa17.53■□□□□ 0.4
VCX3B-203ENST00000444481 PADI2Q9Y2J8 665 aa17.53■□□□□ 0.4
VCX3B-203ENST00000444481 NFS1Q9Y697 457 aa17.53■□□□□ 0.4
VCX3B-203ENST00000444481 CTAGE9A4FU28 777 aa17.52■□□□□ 0.4
VCX3B-203ENST00000444481 TARM1B6A8C7 271 aa17.52■□□□□ 0.4
VCX3B-203ENST00000444481 IL10RAQ13651 578 aa17.52■□□□□ 0.4
VCX3B-203ENST00000444481 NCF4Q15080 339 aa17.52■□□□□ 0.4
VCX3B-203ENST00000444481 LONRF1Q17RB8 773 aa17.52■□□□□ 0.4
VCX3B-203ENST00000444481 DEFB110Q30KQ9 67 aa17.52■□□□□ 0.4
VCX3B-203ENST00000444481 PTCHD3Q3KNS1 767 aa17.52■□□□□ 0.4
VCX3B-203ENST00000444481 TTLL9Q3SXZ7 439 aa17.52■□□□□ 0.4
VCX3B-203ENST00000444481 ZC3H12BQ5HYM0 836 aaKnown RBP17.52■□□□□ 0.4
VCX3B-203ENST00000444481 ZNF470Q6ECI4 717 aa17.52■□□□□ 0.4
VCX3B-203ENST00000444481 PCGF5Q86SE9 256 aa17.52■□□□□ 0.4
VCX3B-203ENST00000444481 PTRH1Q86Y79 214 aaKnown RBP17.52■□□□□ 0.4
VCX3B-203ENST00000444481 ZBTB2Q8N680 514 aa17.52■□□□□ 0.4
VCX3B-203ENST00000444481 LMNTD1Q8N9Z9 388 aa17.52■□□□□ 0.4
VCX3B-203ENST00000444481 ADAMTS17Q8TE56 1095 aa17.52■□□□□ 0.4
VCX3B-203ENST00000444481 SLCO2A1Q92959 643 aa17.52■□□□□ 0.4
VCX3B-203ENST00000444481 EURLQ9NYK6 297 aa17.52■□□□□ 0.4
VCX3B-203ENST00000444481 CIDEBQ9UHD4 219 aa17.52■□□□□ 0.4
VCX3B-203ENST00000444481 PCYOX1Q9UHG3 505 aa17.52■□□□□ 0.4
VCX3B-203ENST00000444481 TLK1Q9UKI8 766 aa17.52■□□□□ 0.4
VCX3B-203ENST00000444481 MAD1L1Q9Y6D9 718 aa17.52■□□□□ 0.4
VCX3B-203ENST00000444481 COMMD10Q9Y6G5 202 aa17.52■□□□□ 0.4
VCX3B-203ENST00000444481 SNRNP200O75643 2136 aaKnown RBP17.51■□□□□ 0.39
VCX3B-203ENST00000444481 ZNF185O15231 689 aa17.51■□□□□ 0.39
VCX3B-203ENST00000444481 HCRTR1O43613 425 aa17.51■□□□□ 0.39
VCX3B-203ENST00000444481 WISP1O95388 367 aa17.51■□□□□ 0.39
VCX3B-203ENST00000444481 DCDP81605 110 aaKnown RBP17.51■□□□□ 0.39
VCX3B-203ENST00000444481 RNASEH2BQ5TBB1 312 aaKnown RBP17.51■□□□□ 0.39
VCX3B-203ENST00000444481 CNSTQ6PJW8 725 aa17.51■□□□□ 0.39
VCX3B-203ENST00000444481 FIGLAQ6QHK4 219 aa17.51■□□□□ 0.39
VCX3B-203ENST00000444481 NEK10Q6ZWH5 1172 aa17.51■□□□□ 0.39
VCX3B-203ENST00000444481 MCATQ8IVS2 390 aaKnown RBP17.51■□□□□ 0.39
VCX3B-203ENST00000444481 C2orf73Q8N5S3 287 aaPredicted RBP17.51■□□□□ 0.39
VCX3B-203ENST00000444481 DLG3Q92796 817 aa17.51■□□□□ 0.39
VCX3B-203ENST00000444481 KCNJ9Q92806 393 aa17.51■□□□□ 0.39
VCX3B-203ENST00000444481 GBP5Q96PP8 586 aa17.51■□□□□ 0.39
VCX3B-203ENST00000444481 TRIM56Q9BRZ2 755 aaKnown RBP17.51■□□□□ 0.39
VCX3B-203ENST00000444481 NDC1Q9BTX1 674 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms