RNA–Protein interactions for RNA: ENST00000444409.1

AP001062.3-202, humanhuman

TSL 2 BASIC

Gene AP001062.3, Length 619 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001062.3-202ENST00000444409 RPS18P62269 152 aaKnown RBP13.17□□□□□ -0.3
AP001062.3-202ENST00000444409 PTK6Q13882 451 aa13.17□□□□□ -0.3
AP001062.3-202ENST00000444409 UGT8Q16880 541 aa13.17□□□□□ -0.3
AP001062.3-202ENST00000444409 DEFB110Q30KQ9 67 aa13.17□□□□□ -0.3
AP001062.3-202ENST00000444409 PAPD7Q5XG87 772 aaKnown RBP13.17□□□□□ -0.3
AP001062.3-202ENST00000444409 LCN10Q6JVE6 187 aa13.17□□□□□ -0.3
AP001062.3-202ENST00000444409 TTC23LQ6PF05 361 aa13.17□□□□□ -0.3
AP001062.3-202ENST00000444409 SYVN1Q86TM6 617 aa13.17□□□□□ -0.3
AP001062.3-202ENST00000444409 LMNTD2Q8IXW0 634 aa13.17□□□□□ -0.3
AP001062.3-202ENST00000444409 SYTL1Q8IYJ3 562 aa13.17□□□□□ -0.3
AP001062.3-202ENST00000444409 GPR135Q8IZ08 494 aa13.17□□□□□ -0.3
AP001062.3-202ENST00000444409 DNAJC22Q8N4W6 341 aa13.17□□□□□ -0.3
AP001062.3-202ENST00000444409 LMNTD1Q8N9Z9 388 aa13.17□□□□□ -0.3
AP001062.3-202ENST00000444409 SKA2Q8WVK7 121 aaPredicted RBP13.17□□□□□ -0.3
AP001062.3-202ENST00000444409 N4BP2L2Q92802 583 aaPredicted RBP13.17□□□□□ -0.3
AP001062.3-202ENST00000444409 FAM136AQ96C01 138 aa13.17□□□□□ -0.3
AP001062.3-202ENST00000444409 FOPNLQ96NB1 174 aa13.17□□□□□ -0.3
AP001062.3-202ENST00000444409 IL17FQ96PD4 163 aa13.17□□□□□ -0.3
AP001062.3-202ENST00000444409 DPH2Q9BQC3 489 aaPredicted RBP13.17□□□□□ -0.3
AP001062.3-202ENST00000444409 SLC39A10Q9ULF5 831 aa13.17□□□□□ -0.3
AP001062.3-202ENST00000444409 RUVBL2Q9Y230 463 aaKnown RBP13.17□□□□□ -0.3
AP001062.3-202ENST00000444409 FARSAQ9Y285 508 aaKnown RBP13.17□□□□□ -0.3
AP001062.3-202ENST00000444409 MAD1L1Q9Y6D9 718 aa13.17□□□□□ -0.3
AP001062.3-202ENST00000444409 PRICKLE3O43900 615 aaPredicted RBP13.16□□□□□ -0.3
AP001062.3-202ENST00000444409 OR2B3O76000 313 aa13.16□□□□□ -0.3
AP001062.3-202ENST00000444409 FKBP9O95302 570 aa13.16□□□□□ -0.3
AP001062.3-202ENST00000444409 CAPN1P07384 714 aa13.16□□□□□ -0.3
AP001062.3-202ENST00000444409 CHRM3P20309 590 aa13.16□□□□□ -0.3
AP001062.3-202ENST00000444409 MAGP20916 626 aa13.16□□□□□ -0.3
AP001062.3-202ENST00000444409 BDKRB1P46663 353 aa13.16□□□□□ -0.3
AP001062.3-202ENST00000444409 CTBP1Q13363 440 aa13.16□□□□□ -0.3
AP001062.3-202ENST00000444409 THOC5Q13769 683 aaKnown RBP13.16□□□□□ -0.3
AP001062.3-202ENST00000444409 LONRF1Q17RB8 773 aa13.16□□□□□ -0.3
AP001062.3-202ENST00000444409 CCSMST1Q4G0I0 132 aa13.16□□□□□ -0.3
AP001062.3-202ENST00000444409 ZNF385CQ66K41 422 aaPredicted RBP13.16□□□□□ -0.3
AP001062.3-202ENST00000444409 CNSTQ6PJW8 725 aa13.16□□□□□ -0.3
AP001062.3-202ENST00000444409 FAM198BQ6UWH4 519 aa13.16□□□□□ -0.3
AP001062.3-202ENST00000444409 CREG2Q8IUH2 290 aa13.16□□□□□ -0.3
AP001062.3-202ENST00000444409 DENND6AQ8IWF6 608 aa13.16□□□□□ -0.3
AP001062.3-202ENST00000444409 FAM20CQ8IXL6 584 aa13.16□□□□□ -0.3
AP001062.3-202ENST00000444409 C2orf73Q8N5S3 287 aaPredicted RBP13.16□□□□□ -0.3
AP001062.3-202ENST00000444409 ZBTB2Q8N680 514 aa13.16□□□□□ -0.3
AP001062.3-202ENST00000444409 ENDOVQ8N8Q3 282 aaKnown RBP13.16□□□□□ -0.3
AP001062.3-202ENST00000444409 HMGCLL1Q8TB92 370 aa13.16□□□□□ -0.3
AP001062.3-202ENST00000444409 DENND1AQ8TEH3 1009 aa13.16□□□□□ -0.3
AP001062.3-202ENST00000444409 NLNQ9BYT8 704 aa13.16□□□□□ -0.3
AP001062.3-202ENST00000444409 GALPQ9UBC7 116 aa13.16□□□□□ -0.3
AP001062.3-202ENST00000444409 ASIC3Q9UHC3 531 aa13.16□□□□□ -0.3
AP001062.3-202ENST00000444409 PLCL2Q9UPR0 1127 aa13.16□□□□□ -0.3
AP001062.3-202ENST00000444409 HEMK1Q9Y5R4 338 aaPredicted RBP13.16□□□□□ -0.3
AP001062.3-202ENST00000444409 AP1M2Q9Y6Q5 423 aa13.16□□□□□ -0.3
AP001062.3-202ENST00000444409 FAM169AQ9Y6X4 670 aa13.16□□□□□ -0.3
AP001062.3-202ENST00000444409 SNRNP200O75643 2136 aaKnown RBP13.16□□□□□ -0.3
AP001062.3-202ENST00000444409 SEC16AO15027 2179 aa13.15□□□□□ -0.3
AP001062.3-202ENST00000444409 CTAGE9A4FU28 777 aa13.15□□□□□ -0.3
AP001062.3-202ENST00000444409 E5RI56 91 aa13.15□□□□□ -0.3
AP001062.3-202ENST00000444409 J3QKU1 62 aa13.15□□□□□ -0.3
AP001062.3-202ENST00000444409 DNALI1O14645 258 aaPredicted RBP13.15□□□□□ -0.3
AP001062.3-202ENST00000444409 ZSCAN9O15535 394 aaPredicted RBP13.15□□□□□ -0.3
AP001062.3-202ENST00000444409 SUV39H1O43463 412 aa13.15□□□□□ -0.3
AP001062.3-202ENST00000444409 SLC28A2O43868 658 aa13.15□□□□□ -0.3
AP001062.3-202ENST00000444409 CTSBP07858 339 aa13.15□□□□□ -0.3
AP001062.3-202ENST00000444409 F7P08709 466 aaPredicted RBP13.15□□□□□ -0.3
AP001062.3-202ENST00000444409 IVDP26440 423 aa13.15□□□□□ -0.3
AP001062.3-202ENST00000444409 SLC1A2P43004 574 aa13.15□□□□□ -0.3
AP001062.3-202ENST00000444409 PTGIRP43119 386 aa13.15□□□□□ -0.3
AP001062.3-202ENST00000444409 CLCN7P51798 805 aa13.15□□□□□ -0.3
AP001062.3-202ENST00000444409 PMS2P54278 862 aa13.15□□□□□ -0.3
AP001062.3-202ENST00000444409 GNG11P61952 73 aa13.15□□□□□ -0.3
AP001062.3-202ENST00000444409 NFKB2Q00653 900 aa13.15□□□□□ -0.3
AP001062.3-202ENST00000444409 IL10RAQ13651 578 aa13.15□□□□□ -0.3
AP001062.3-202ENST00000444409 PTCHD3Q3KNS1 767 aa13.15□□□□□ -0.3
AP001062.3-202ENST00000444409 ACSBG2Q5FVE4 666 aa13.15□□□□□ -0.3
AP001062.3-202ENST00000444409 RHBDD2Q6NTF9 364 aa13.15□□□□□ -0.3
AP001062.3-202ENST00000444409 ZNF549Q6P9A3 640 aa13.15□□□□□ -0.3
AP001062.3-202ENST00000444409 TLDC1Q6P9B6 456 aa13.15□□□□□ -0.3
AP001062.3-202ENST00000444409 PRICKLE2Q7Z3G6 844 aa13.15□□□□□ -0.3
AP001062.3-202ENST00000444409 PCGF5Q86SE9 256 aa13.15□□□□□ -0.3
AP001062.3-202ENST00000444409 TAX1BP1Q86VP1 789 aa13.15□□□□□ -0.3
AP001062.3-202ENST00000444409 APLFQ8IW19 511 aaPredicted RBP13.15□□□□□ -0.3
AP001062.3-202ENST00000444409 RAB42Q8N4Z0 105 aa13.15□□□□□ -0.3
AP001062.3-202ENST00000444409 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.15□□□□□ -0.3
AP001062.3-202ENST00000444409 C9orf43Q8TAL5 461 aaPredicted RBP13.15□□□□□ -0.3
AP001062.3-202ENST00000444409 CALML6Q8TD86 181 aa13.15□□□□□ -0.3
AP001062.3-202ENST00000444409 MAGEC3Q8TD91 643 aa13.15□□□□□ -0.3
AP001062.3-202ENST00000444409 THAP4Q8WY91 577 aa13.15□□□□□ -0.3
AP001062.3-202ENST00000444409 KCNJ9Q92806 393 aa13.15□□□□□ -0.3
AP001062.3-202ENST00000444409 ABHD17AQ96GS6 310 aa13.15□□□□□ -0.3
AP001062.3-202ENST00000444409 SLC7A5P2Q9GIP4 190 aa13.15□□□□□ -0.3
AP001062.3-202ENST00000444409 SPRTNQ9H040 489 aaPredicted RBP13.15□□□□□ -0.3
AP001062.3-202ENST00000444409 FBXO6Q9NRD1 293 aaPredicted RBP13.15□□□□□ -0.3
AP001062.3-202ENST00000444409 C20orf96Q9NUD7 363 aaPredicted RBP13.15□□□□□ -0.3
AP001062.3-202ENST00000444409 SPATA7Q9P0W8 599 aa13.15□□□□□ -0.3
AP001062.3-202ENST00000444409 KLHL42Q9P2K6 505 aa13.15□□□□□ -0.3
AP001062.3-202ENST00000444409 TCFL5Q9UL49 500 aa13.15□□□□□ -0.3
AP001062.3-202ENST00000444409 MAN2B2Q9Y2E5 1009 aa13.15□□□□□ -0.3
AP001062.3-202ENST00000444409 KLHL20Q9Y2M5 609 aa13.15□□□□□ -0.3
AP001062.3-202ENST00000444409 MED16Q9Y2X0 877 aa13.15□□□□□ -0.3
AP001062.3-202ENST00000444409 KRT87PA6NCN2 255 aa13.14□□□□□ -0.31
AP001062.3-202ENST00000444409 PSIP1O75475 530 aaKnown RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms