RNA–Protein interactions for RNA: ENST00000443727.1

LRCH3-208, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-208ENST00000443727 PTCHD3Q3KNS1 767 aa19.36■□□□□ 0.69
LRCH3-208ENST00000443727 ANKRD20A4Q4UJ75 823 aa19.36■□□□□ 0.69
LRCH3-208ENST00000443727 LACTB2Q53H82 288 aaPredicted RBP19.36■□□□□ 0.69
LRCH3-208ENST00000443727 LCN10Q6JVE6 187 aa19.36■□□□□ 0.69
LRCH3-208ENST00000443727 CNSTQ6PJW8 725 aa19.36■□□□□ 0.69
LRCH3-208ENST00000443727 ZNF517Q6ZMY9 492 aaPredicted RBP19.36■□□□□ 0.69
LRCH3-208ENST00000443727 FAM20CQ8IXL6 584 aa19.36■□□□□ 0.69
LRCH3-208ENST00000443727 OR2L8Q8NGY9 312 aa19.36■□□□□ 0.69
LRCH3-208ENST00000443727 THAP4Q8WY91 577 aa19.36■□□□□ 0.69
LRCH3-208ENST00000443727 RAD51AP1Q96B01 352 aa19.36■□□□□ 0.69
LRCH3-208ENST00000443727 SERPINB12Q96P63 405 aa19.36■□□□□ 0.69
LRCH3-208ENST00000443727 DPH2Q9BQC3 489 aaPredicted RBP19.36■□□□□ 0.69
LRCH3-208ENST00000443727 TRIM56Q9BRZ2 755 aaKnown RBP19.36■□□□□ 0.69
LRCH3-208ENST00000443727 NLNQ9BYT8 704 aa19.36■□□□□ 0.69
LRCH3-208ENST00000443727 CHRNA10Q9GZZ6 450 aa19.36■□□□□ 0.69
LRCH3-208ENST00000443727 SPRTNQ9H040 489 aaPredicted RBP19.36■□□□□ 0.69
LRCH3-208ENST00000443727 KCNF1Q9H3M0 494 aa19.36■□□□□ 0.69
LRCH3-208ENST00000443727 INTS7Q9NVH2 962 aaKnown RBP19.36■□□□□ 0.69
LRCH3-208ENST00000443727 IL1RAPL1Q9NZN1 696 aa19.36■□□□□ 0.69
LRCH3-208ENST00000443727 RUVBL2Q9Y230 463 aaKnown RBP19.36■□□□□ 0.69
LRCH3-208ENST00000443727 CES2O00748 559 aa19.35■□□□□ 0.69
LRCH3-208ENST00000443727 ZNF185O15231 689 aa19.35■□□□□ 0.69
LRCH3-208ENST00000443727 S1PR4O95977 384 aa19.35■□□□□ 0.69
LRCH3-208ENST00000443727 RAB40ALP0C0E4 278 aa19.35■□□□□ 0.69
LRCH3-208ENST00000443727 ATXN8OSP0DMR3 200 aa19.35■□□□□ 0.69
LRCH3-208ENST00000443727 MAGP20916 626 aa19.35■□□□□ 0.69
LRCH3-208ENST00000443727 CCNFP41002 786 aa19.35■□□□□ 0.69
LRCH3-208ENST00000443727 BDKRB1P46663 353 aa19.35■□□□□ 0.69
LRCH3-208ENST00000443727 PMS2P54278 862 aa19.35■□□□□ 0.69
LRCH3-208ENST00000443727 ZNF470Q6ECI4 717 aa19.35■□□□□ 0.69
LRCH3-208ENST00000443727 CILP2Q8IUL8 1156 aa19.35■□□□□ 0.69
LRCH3-208ENST00000443727 PPIL6Q8IXY8 311 aa19.35■□□□□ 0.69
LRCH3-208ENST00000443727 LMNTD1Q8N9Z9 388 aa19.35■□□□□ 0.69
LRCH3-208ENST00000443727 LINC01555Q8NAE3 123 aa19.35■□□□□ 0.69
LRCH3-208ENST00000443727 MAGEC3Q8TD91 643 aa19.35■□□□□ 0.69
LRCH3-208ENST00000443727 TRIM4Q9C037 500 aa19.35■□□□□ 0.69
LRCH3-208ENST00000443727 PLCL2Q9UPR0 1127 aa19.35■□□□□ 0.69
LRCH3-208ENST00000443727 KLHL20Q9Y2M5 609 aa19.35■□□□□ 0.69
LRCH3-208ENST00000443727 NEU2Q9Y3R4 380 aa19.35■□□□□ 0.69
LRCH3-208ENST00000443727 NFS1Q9Y697 457 aa19.35■□□□□ 0.69
LRCH3-208ENST00000443727 ZSCAN9O15535 394 aaPredicted RBP19.34■□□□□ 0.69
LRCH3-208ENST00000443727 C1orf105O95561 183 aa19.34■□□□□ 0.69
LRCH3-208ENST00000443727 ADARP55265 1226 aaKnown RBP19.34■□□□□ 0.69
LRCH3-208ENST00000443727 IL10RAQ13651 578 aa19.34■□□□□ 0.69
LRCH3-208ENST00000443727 GRB7Q14451 532 aa19.34■□□□□ 0.69
LRCH3-208ENST00000443727 C1orf189Q5VU69 101 aa19.34■□□□□ 0.69
LRCH3-208ENST00000443727 ZBTB2Q8N680 514 aa19.34■□□□□ 0.69
LRCH3-208ENST00000443727 ZNF655Q8N720 491 aaPredicted RBP19.34■□□□□ 0.69
LRCH3-208ENST00000443727 MENTQ9BUN1 341 aa19.34■□□□□ 0.69
LRCH3-208ENST00000443727 CCDC68Q9H2F9 335 aa19.34■□□□□ 0.69
LRCH3-208ENST00000443727 C20orf96Q9NUD7 363 aaPredicted RBP19.34■□□□□ 0.69
LRCH3-208ENST00000443727 TXLNGQ9NUQ3 528 aa19.34■□□□□ 0.69
LRCH3-208ENST00000443727 INTS10Q9NVR2 710 aaKnown RBP19.34■□□□□ 0.69
LRCH3-208ENST00000443727 ASIC3Q9UHC3 531 aa19.34■□□□□ 0.69
LRCH3-208ENST00000443727 GPN3Q9UHW5 284 aaPredicted RBP19.34■□□□□ 0.69
LRCH3-208ENST00000443727 TCFL5Q9UL49 500 aa19.34■□□□□ 0.69
LRCH3-208ENST00000443727 SPTBP11277 2137 aa19.34■□□□□ 0.69
LRCH3-208ENST00000443727 HCRTR1O43613 425 aa19.33■□□□□ 0.68
LRCH3-208ENST00000443727 ZIC2O95409 532 aaPredicted RBP19.33■□□□□ 0.68
LRCH3-208ENST00000443727 PKMP14618 531 aaKnown RBP19.33■□□□□ 0.68
LRCH3-208ENST00000443727 NCF4Q15080 339 aa19.33■□□□□ 0.68
LRCH3-208ENST00000443727 TLDC1Q6P9B6 456 aa19.33■□□□□ 0.68
LRCH3-208ENST00000443727 FAM198BQ6UWH4 519 aa19.33■□□□□ 0.68
LRCH3-208ENST00000443727 CENPUQ71F23 418 aa19.33■□□□□ 0.68
LRCH3-208ENST00000443727 DNAJC22Q8N4W6 341 aa19.33■□□□□ 0.68
LRCH3-208ENST00000443727 C17orf62Q9BQA9 187 aa19.33■□□□□ 0.68
LRCH3-208ENST00000443727 NDC1Q9BTX1 674 aa19.33■□□□□ 0.68
LRCH3-208ENST00000443727 TLK1Q9UKI8 766 aa19.33■□□□□ 0.68
LRCH3-208ENST00000443727 SRPK3Q9UPE1 567 aa19.33■□□□□ 0.68
LRCH3-208ENST00000443727 PADI2Q9Y2J8 665 aa19.33■□□□□ 0.68
LRCH3-208ENST00000443727 ARGFXA6NJG6 315 aa19.32■□□□□ 0.68
LRCH3-208ENST00000443727 USP1O94782 785 aa19.32■□□□□ 0.68
LRCH3-208ENST00000443727 TCP1P17987 556 aaKnown RBP19.32■□□□□ 0.68
LRCH3-208ENST00000443727 ATP5DP30049 168 aa19.32■□□□□ 0.68
LRCH3-208ENST00000443727 GABRA4P48169 554 aa19.32■□□□□ 0.68
LRCH3-208ENST00000443727 CTBP1Q13363 440 aa19.32■□□□□ 0.68
LRCH3-208ENST00000443727 LONRF1Q17RB8 773 aa19.32■□□□□ 0.68
LRCH3-208ENST00000443727 CCSMST1Q4G0I0 132 aa19.32■□□□□ 0.68
LRCH3-208ENST00000443727 FAM69BQ5VUD6 431 aa19.32■□□□□ 0.68
LRCH3-208ENST00000443727 MLIPQ5VWP3 458 aa19.32■□□□□ 0.68
LRCH3-208ENST00000443727 MCATQ8IVS2 390 aaKnown RBP19.32■□□□□ 0.68
LRCH3-208ENST00000443727 APLFQ8IW19 511 aaPredicted RBP19.32■□□□□ 0.68
LRCH3-208ENST00000443727 NAT8LQ8N9F0 302 aa19.32■□□□□ 0.68
LRCH3-208ENST00000443727 ACSS2Q9NR19 701 aa19.32■□□□□ 0.68
LRCH3-208ENST00000443727 FBXO6Q9NRD1 293 aaPredicted RBP19.32■□□□□ 0.68
LRCH3-208ENST00000443727 EURLQ9NYK6 297 aa19.32■□□□□ 0.68
LRCH3-208ENST00000443727 TP53TG5Q9Y2B4 290 aa19.32■□□□□ 0.68
LRCH3-208ENST00000443727 ZCWPW2A0A1B0GU75 182 aa19.31■□□□□ 0.68
LRCH3-208ENST00000443727 DNAJB5O75953 348 aa19.31■□□□□ 0.68
LRCH3-208ENST00000443727 CBSLP0DN79 551 aa19.31■□□□□ 0.68
LRCH3-208ENST00000443727 CBSP35520 551 aa19.31■□□□□ 0.68
LRCH3-208ENST00000443727 GRIA3P42263 894 aa19.31■□□□□ 0.68
LRCH3-208ENST00000443727 DCDP81605 110 aaKnown RBP19.31■□□□□ 0.68
LRCH3-208ENST00000443727 KCNC4Q03721 635 aa19.31■□□□□ 0.68
LRCH3-208ENST00000443727 TTLL9Q3SXZ7 439 aa19.31■□□□□ 0.68
LRCH3-208ENST00000443727 ACSBG2Q5FVE4 666 aa19.31■□□□□ 0.68
LRCH3-208ENST00000443727 ZC3H12BQ5HYM0 836 aaKnown RBP19.31■□□□□ 0.68
LRCH3-208ENST00000443727 RHBDD2Q6NTF9 364 aa19.31■□□□□ 0.68
LRCH3-208ENST00000443727 FIGLAQ6QHK4 219 aa19.31■□□□□ 0.68
LRCH3-208ENST00000443727 DENND6AQ8IWF6 608 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms