RNA–Protein interactions for RNA: ENST00000441310.6

PMS1-213, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMS1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-213ENST00000441310 IGFBP5P24593 272 aa16.43■□□□□ 0.22
PMS1-213ENST00000441310 HERVK_113P63132 956 aa16.43■□□□□ 0.22
PMS1-213ENST00000441310 TRIM60Q495X7 471 aa16.43■□□□□ 0.22
PMS1-213ENST00000441310 GPAT3Q53EU6 434 aa16.43■□□□□ 0.22
PMS1-213ENST00000441310 VN1R5Q7Z5H4 357 aa16.43■□□□□ 0.22
PMS1-213ENST00000441310 CNTN4Q8IWV2 1026 aa16.43■□□□□ 0.22
PMS1-213ENST00000441310 SLC7A6Q92536 515 aa16.43■□□□□ 0.22
PMS1-213ENST00000441310 OR2A14Q96R47 310 aa16.43■□□□□ 0.22
PMS1-213ENST00000441310 ERVK-6Q9BXR3 956 aa16.43■□□□□ 0.22
PMS1-213ENST00000441310 UCK2Q9BZX2 261 aa16.43■□□□□ 0.22
PMS1-213ENST00000441310 FBXW11Q9UKB1 542 aa16.43■□□□□ 0.22
PMS1-213ENST00000441310 MKLN1Q9UL63 735 aa16.43■□□□□ 0.22
PMS1-213ENST00000441310 ZNF236Q9UL36 1845 aa16.43■□□□□ 0.22
PMS1-213ENST00000441310 CTRB1P17538 263 aa16.43■□□□□ 0.22
PMS1-213ENST00000441310 UGT2B10P36537 528 aa16.43■□□□□ 0.22
PMS1-213ENST00000441310 IL12RB1P42701 662 aa16.43■□□□□ 0.22
PMS1-213ENST00000441310 SLC9A3P48764 834 aa16.43■□□□□ 0.22
PMS1-213ENST00000441310 GBX1Q14549 363 aa16.43■□□□□ 0.22
PMS1-213ENST00000441310 FXNQ16595 210 aa16.43■□□□□ 0.22
PMS1-213ENST00000441310 CTRB2Q6GPI1 263 aa16.43■□□□□ 0.22
PMS1-213ENST00000441310 CD300LGQ6UXG3 332 aa16.43■□□□□ 0.22
PMS1-213ENST00000441310 NECAB2Q7Z6G3 386 aa16.43■□□□□ 0.22
PMS1-213ENST00000441310 AMIGO1Q86WK6 493 aa16.43■□□□□ 0.22
PMS1-213ENST00000441310 FBXL6Q8N531 539 aa16.43■□□□□ 0.22
PMS1-213ENST00000441310 C2CD4AQ8NCU7 369 aaPredicted RBP16.43■□□□□ 0.22
PMS1-213ENST00000441310 PPHLN1Q8NEY8 458 aaKnown RBP16.43■□□□□ 0.22
PMS1-213ENST00000441310 OR5K1Q8NHB7 308 aa16.43■□□□□ 0.22
PMS1-213ENST00000441310 TTC9Q92623 222 aa16.43■□□□□ 0.22
PMS1-213ENST00000441310 FAM162AQ96A26 154 aa16.43■□□□□ 0.22
PMS1-213ENST00000441310 B3GALT6Q96L58 329 aa16.43■□□□□ 0.22
PMS1-213ENST00000441310 ACOX2Q99424 681 aa16.43■□□□□ 0.22
PMS1-213ENST00000441310 BARD1Q99728 777 aaKnown RBP16.43■□□□□ 0.22
PMS1-213ENST00000441310 CHCHD6Q9BRQ6 235 aa16.43■□□□□ 0.22
PMS1-213ENST00000441310 ZSCAN5AQ9BUG6 496 aa16.43■□□□□ 0.22
PMS1-213ENST00000441310 OR51E2Q9H255 320 aa16.43■□□□□ 0.22
PMS1-213ENST00000441310 RETREG1Q9H6L5 497 aa16.43■□□□□ 0.22
PMS1-213ENST00000441310 SEMA4BQ9NPR2 832 aaPredicted RBP16.43■□□□□ 0.22
PMS1-213ENST00000441310 RCOR3Q9P2K3 495 aaPredicted RBP16.43■□□□□ 0.22
PMS1-213ENST00000441310 PEX16Q9Y5Y5 336 aa16.43■□□□□ 0.22
PMS1-213ENST00000441310 DFFAO00273 331 aa16.42■□□□□ 0.22
PMS1-213ENST00000441310 DCLK1O15075 740 aa16.42■□□□□ 0.22
PMS1-213ENST00000441310 AKR7A2O43488 359 aa16.42■□□□□ 0.22
PMS1-213ENST00000441310 JUNDP17535 347 aa16.42■□□□□ 0.22
PMS1-213ENST00000441310 ATF4P18848 351 aaPredicted RBP16.42■□□□□ 0.22
PMS1-213ENST00000441310 NUDT1P36639 197 aa16.42■□□□□ 0.22
PMS1-213ENST00000441310 DET1Q7L5Y6 550 aa16.42■□□□□ 0.22
PMS1-213ENST00000441310 BHLHA9Q7RTU4 235 aa16.42■□□□□ 0.22
PMS1-213ENST00000441310 PEX13Q92968 403 aa16.42■□□□□ 0.22
PMS1-213ENST00000441310 FICDQ9BVA6 458 aa16.42■□□□□ 0.22
PMS1-213ENST00000441310 ACAT2Q9BWD1 397 aa16.42■□□□□ 0.22
PMS1-213ENST00000441310 GON7Q9BXV9 100 aa16.42■□□□□ 0.22
PMS1-213ENST00000441310 MRM3Q9HC36 420 aaKnown RBP16.42■□□□□ 0.22
PMS1-213ENST00000441310 TMEM39AQ9NV64 488 aa16.42■□□□□ 0.22
PMS1-213ENST00000441310 SMPD4Q9NXE4 827 aa16.42■□□□□ 0.22
PMS1-213ENST00000441310 PKP3Q9Y446 797 aa16.42■□□□□ 0.22
PMS1-213ENST00000441310 PNMA8CA0A1B0GUJ8 204 aa16.42■□□□□ 0.22
PMS1-213ENST00000441310 PSKH1P11801 424 aa16.42■□□□□ 0.22
PMS1-213ENST00000441310 NAGAP17050 411 aa16.42■□□□□ 0.22
PMS1-213ENST00000441310 KRT20P35900 424 aa16.42■□□□□ 0.22
PMS1-213ENST00000441310 CHRNA4P43681 627 aa16.42■□□□□ 0.22
PMS1-213ENST00000441310 TARDBPQ13148 414 aaKnown RBP eCLIP16.42■□□□□ 0.22
PMS1-213ENST00000441310 GALNT3Q14435 633 aa16.42■□□□□ 0.22
PMS1-213ENST00000441310 ATP6AP1LQ52LC2 224 aa16.42■□□□□ 0.22
PMS1-213ENST00000441310 TOR2AQ5JU69 321 aa16.42■□□□□ 0.22
PMS1-213ENST00000441310 TMEM207Q6UWW9 146 aa16.42■□□□□ 0.22
PMS1-213ENST00000441310 GALNT6Q8NCL4 622 aa16.42■□□□□ 0.22
PMS1-213ENST00000441310 LRRC20Q8TCA0 184 aa16.42■□□□□ 0.22
PMS1-213ENST00000441310 NCLNQ969V3 563 aa16.42■□□□□ 0.22
PMS1-213ENST00000441310 PTERQ96BW5 349 aa16.42■□□□□ 0.22
PMS1-213ENST00000441310 PABPC5Q96DU9 382 aaKnown RBP16.42■□□□□ 0.22
PMS1-213ENST00000441310 L3HYPDHQ96EM0 354 aa16.42■□□□□ 0.22
PMS1-213ENST00000441310 LYVE1Q9Y5Y7 322 aa16.42■□□□□ 0.22
PMS1-213ENST00000441310 LAMA3Q16787 3333 aa16.42■□□□□ 0.22
PMS1-213ENST00000441310 RPL9P32969 192 aaKnown RBP16.41■□□□□ 0.22
PMS1-213ENST00000441310 RFX2P48378 723 aa16.41■□□□□ 0.22
PMS1-213ENST00000441310 MVKQ03426 396 aa16.41■□□□□ 0.22
PMS1-213ENST00000441310 YWHAHQ04917 246 aaPredicted RBP16.41■□□□□ 0.22
PMS1-213ENST00000441310 INTS6LQ5JSJ4 861 aaKnown RBP16.41■□□□□ 0.22
PMS1-213ENST00000441310 LRRC8DQ7L1W4 858 aa16.41■□□□□ 0.22
PMS1-213ENST00000441310 ISCA2Q86U28 154 aa16.41■□□□□ 0.22
PMS1-213ENST00000441310 CYP4Z1Q86W10 505 aa16.41■□□□□ 0.22
PMS1-213ENST00000441310 ADHFE1Q8IWW8 467 aa16.41■□□□□ 0.22
PMS1-213ENST00000441310 AMBNQ9NP70 447 aa16.41■□□□□ 0.22
PMS1-213ENST00000441310 PCDH10Q9P2E7 1040 aa16.41■□□□□ 0.22
PMS1-213ENST00000441310 ARHGEF9O43307 516 aa16.41■□□□□ 0.22
PMS1-213ENST00000441310 GSTM1P09488 218 aa16.41■□□□□ 0.22
PMS1-213ENST00000441310 CA5AP35218 305 aa16.41■□□□□ 0.22
PMS1-213ENST00000441310 HNF4AP41235 474 aa16.41■□□□□ 0.22
PMS1-213ENST00000441310 OR1G1P47890 313 aa16.41■□□□□ 0.22
PMS1-213ENST00000441310 TUSC3Q13454 348 aa16.41■□□□□ 0.22
PMS1-213ENST00000441310 HECTD2Q5U5R9 776 aa16.41■□□□□ 0.22
PMS1-213ENST00000441310 KANK2Q63ZY3 851 aa16.41■□□□□ 0.22
PMS1-213ENST00000441310 DEDD2Q8WXF8 326 aa16.41■□□□□ 0.22
PMS1-213ENST00000441310 SLC39A13Q96H72 371 aa16.41■□□□□ 0.22
PMS1-213ENST00000441310 AIG1Q9NVV5 245 aa16.41■□□□□ 0.22
PMS1-213ENST00000441310 A0A096LPI6 279 aa16.41■□□□□ 0.22
PMS1-213ENST00000441310 PCP4L1A6NKN8 68 aa16.41■□□□□ 0.22
PMS1-213ENST00000441310 M0R082 166 aa16.41■□□□□ 0.22
PMS1-213ENST00000441310 ITGA2P17301 1181 aa16.41■□□□□ 0.22
PMS1-213ENST00000441310 EPHA2P29317 976 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms