RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 CARSP49589 748 aaKnown RBP22.83■■□□□ 1.25
VARS-217ENST00000440048 PDIA2Q13087 525 aaKnown RBP22.83■■□□□ 1.25
VARS-217ENST00000440048 SLC5A12Q1EHB4 618 aa22.83■■□□□ 1.25
VARS-217ENST00000440048 TTLL9Q3SXZ7 439 aa22.83■■□□□ 1.25
VARS-217ENST00000440048 TRMT10BQ6PF06 316 aaKnown RBP22.83■■□□□ 1.25
VARS-217ENST00000440048 ZNF572Q7Z3I7 529 aaPredicted RBP22.83■■□□□ 1.25
VARS-217ENST00000440048 C19orf47Q8N9M1 422 aaKnown RBP22.83■■□□□ 1.25
VARS-217ENST00000440048 ZSCAN1Q8NBB4 408 aa22.83■■□□□ 1.25
VARS-217ENST00000440048 SLC39A7Q92504 469 aa22.83■■□□□ 1.25
VARS-217ENST00000440048 GPR21Q99679 349 aa22.83■■□□□ 1.25
VARS-217ENST00000440048 GPN2Q9H9Y4 310 aaPredicted RBP22.83■■□□□ 1.25
VARS-217ENST00000440048 FANCEQ9HB96 536 aa22.83■■□□□ 1.25
VARS-217ENST00000440048 SYTL2Q9HCH5 934 aa22.83■■□□□ 1.25
VARS-217ENST00000440048 WHRNQ9P202 907 aa22.83■■□□□ 1.25
VARS-217ENST00000440048 SLC17A6Q9P2U8 582 aa22.83■■□□□ 1.25
VARS-217ENST00000440048 DHRS7Q9Y394 339 aa22.83■■□□□ 1.25
VARS-217ENST00000440048 E7ESA3 106 aa22.82■■□□□ 1.24
VARS-217ENST00000440048 NTRK1P04629 796 aa22.82■■□□□ 1.24
VARS-217ENST00000440048 MSL3P1P0C860 447 aa22.82■■□□□ 1.24
VARS-217ENST00000440048 CUL1Q13616 776 aa22.82■■□□□ 1.24
VARS-217ENST00000440048 FASTKD3Q14CZ7 662 aaKnown RBP22.82■■□□□ 1.24
VARS-217ENST00000440048 ZIC1Q15915 447 aa22.82■■□□□ 1.24
VARS-217ENST00000440048 TEDDM1Q5T9Z0 273 aa22.82■■□□□ 1.24
VARS-217ENST00000440048 DUPD1Q68J44 220 aa22.82■■□□□ 1.24
VARS-217ENST00000440048 CDHR3Q6ZTQ4 885 aa22.82■■□□□ 1.24
VARS-217ENST00000440048 KIAA0408Q6ZU52 694 aa22.82■■□□□ 1.24
VARS-217ENST00000440048 NEK10Q6ZWH5 1172 aa22.82■■□□□ 1.24
VARS-217ENST00000440048 TAX1BP1Q86VP1 789 aa22.82■■□□□ 1.24
VARS-217ENST00000440048 MAGEC3Q8TD91 643 aa22.82■■□□□ 1.24
VARS-217ENST00000440048 INPP5DQ92835 1189 aa22.82■■□□□ 1.24
VARS-217ENST00000440048 KIAA1143Q96AT1 154 aaPredicted RBP22.82■■□□□ 1.24
VARS-217ENST00000440048 RAB11FIP5Q9BXF6 653 aa22.82■■□□□ 1.24
VARS-217ENST00000440048 FAM60AQ9NP50 221 aa22.82■■□□□ 1.24
VARS-217ENST00000440048 PPANQ9NQ55 473 aaKnown RBP22.82■■□□□ 1.24
VARS-217ENST00000440048 TMEM150CB9EJG8 249 aa22.81■■□□□ 1.24
VARS-217ENST00000440048 SCRG1O75711 98 aa22.81■■□□□ 1.24
VARS-217ENST00000440048 AHSGP02765 367 aa22.81■■□□□ 1.24
VARS-217ENST00000440048 MT-ND3P03897 115 aa22.81■■□□□ 1.24
VARS-217ENST00000440048 CALCOCO2Q13137 446 aa22.81■■□□□ 1.24
VARS-217ENST00000440048 CBLBQ13191 982 aa22.81■■□□□ 1.24
VARS-217ENST00000440048 TMEM126BQ8IUX1 230 aa22.81■■□□□ 1.24
VARS-217ENST00000440048 FAM20CQ8IXL6 584 aa22.81■■□□□ 1.24
VARS-217ENST00000440048 FBXO36Q8NEA4 188 aa22.81■■□□□ 1.24
VARS-217ENST00000440048 OR1L3Q8NH93 324 aa22.81■■□□□ 1.24
VARS-217ENST00000440048 CD200R1Q8TD46 325 aa22.81■■□□□ 1.24
VARS-217ENST00000440048 DENND1AQ8TEH3 1009 aa22.81■■□□□ 1.24
VARS-217ENST00000440048 SLC22A18Q96BI1 424 aa22.81■■□□□ 1.24
VARS-217ENST00000440048 TCTN2Q96GX1 697 aa22.81■■□□□ 1.24
VARS-217ENST00000440048 NDNQ99608 321 aa22.81■■□□□ 1.24
VARS-217ENST00000440048 SLC12A9Q9BXP2 914 aa22.81■■□□□ 1.24
VARS-217ENST00000440048 IL17BQ9UHF5 180 aa22.81■■□□□ 1.24
VARS-217ENST00000440048 CDC23Q9UJX2 597 aa22.81■■□□□ 1.24
VARS-217ENST00000440048 PCM1Q15154 2024 aa22.81■■□□□ 1.24
VARS-217ENST00000440048 SEC16AO15027 2179 aa22.8■■□□□ 1.24
VARS-217ENST00000440048 ARHGEF33A8MVX0 844 aa22.8■■□□□ 1.24
VARS-217ENST00000440048 VPS26AO75436 327 aa22.8■■□□□ 1.24
VARS-217ENST00000440048 PSIP1O75475 530 aaKnown RBP22.8■■□□□ 1.24
VARS-217ENST00000440048 CCNYL3P0C7X3 344 aa22.8■■□□□ 1.24
VARS-217ENST00000440048 CYP4F2P78329 520 aa22.8■■□□□ 1.24
VARS-217ENST00000440048 TIAL1Q01085 375 aaKnown RBP eCLIP22.8■■□□□ 1.24
VARS-217ENST00000440048 FRG1Q14331 258 aaKnown RBP22.8■■□□□ 1.24
VARS-217ENST00000440048 EEF1AKMT2Q5JPI9 291 aaKnown RBP22.8■■□□□ 1.24
VARS-217ENST00000440048 PRAMEF17Q5VTA0 474 aa22.8■■□□□ 1.24
VARS-217ENST00000440048 GALNT7Q86SF2 657 aa22.8■■□□□ 1.24
VARS-217ENST00000440048 RAB42Q8N4Z0 105 aa22.8■■□□□ 1.24
VARS-217ENST00000440048 TTC9Q92623 222 aa22.8■■□□□ 1.24
VARS-217ENST00000440048 SLC45A3Q96JT2 553 aa22.8■■□□□ 1.24
VARS-217ENST00000440048 EFHD1Q9BUP0 239 aa22.8■■□□□ 1.24
VARS-217ENST00000440048 CHRNA10Q9GZZ6 450 aa22.8■■□□□ 1.24
VARS-217ENST00000440048 GRHL1Q9NZI5 618 aa22.8■■□□□ 1.24
VARS-217ENST00000440048 CROTQ9UKG9 612 aa22.8■■□□□ 1.24
VARS-217ENST00000440048 PADI1Q9ULC6 663 aa22.8■■□□□ 1.24
VARS-217ENST00000440048 HELZ2Q9BYK8 2649 aaKnown RBP22.79■■□□□ 1.24
VARS-217ENST00000440048 GCN1Q92616 2671 aaKnown RBP22.79■■□□□ 1.24
VARS-217ENST00000440048 PRICKLE3O43900 615 aaPredicted RBP22.79■■□□□ 1.24
VARS-217ENST00000440048 URI1O94763 535 aaPredicted RBP22.79■■□□□ 1.24
VARS-217ENST00000440048 MPC1LP0DKB6 136 aa22.79■■□□□ 1.24
VARS-217ENST00000440048 ENO3P13929 434 aaPredicted RBP22.79■■□□□ 1.24
VARS-217ENST00000440048 CKAP4Q07065 602 aaKnown RBP22.79■■□□□ 1.24
VARS-217ENST00000440048 RBM20Q5T481 1227 aaKnown RBP22.79■■□□□ 1.24
VARS-217ENST00000440048 PCSK4Q6UW60 755 aa22.79■■□□□ 1.24
VARS-217ENST00000440048 CYHR1Q6ZMK1 362 aa22.79■■□□□ 1.24
VARS-217ENST00000440048 CPNE9Q8IYJ1 553 aa22.79■■□□□ 1.24
VARS-217ENST00000440048 OR9A1PQ8NGU1 263 aa22.79■■□□□ 1.24
VARS-217ENST00000440048 HMGCLL1Q8TB92 370 aa22.79■■□□□ 1.24
VARS-217ENST00000440048 LHX9Q9NQ69 397 aa22.79■■□□□ 1.24
VARS-217ENST00000440048 FAM114A2Q9NRY5 505 aa22.79■■□□□ 1.24
VARS-217ENST00000440048 SPATA7Q9P0W8 599 aa22.79■■□□□ 1.24
VARS-217ENST00000440048 SERTAD3Q9UJW9 196 aa22.79■■□□□ 1.24
VARS-217ENST00000440048 UTP11Q9Y3A2 253 aaKnown RBP22.79■■□□□ 1.24
VARS-217ENST00000440048 CPNE3O75131 537 aaKnown RBP22.78■■□□□ 1.24
VARS-217ENST00000440048 CATP04040 527 aaKnown RBP22.78■■□□□ 1.24
VARS-217ENST00000440048 CBSLP0DN79 551 aa22.78■■□□□ 1.24
VARS-217ENST00000440048 F8A1P23610 371 aa22.78■■□□□ 1.24
VARS-217ENST00000440048 MCM3P25205 808 aa22.78■■□□□ 1.24
VARS-217ENST00000440048 CBSP35520 551 aa22.78■■□□□ 1.24
VARS-217ENST00000440048 DLSTP36957 453 aa22.78■■□□□ 1.24
VARS-217ENST00000440048 GABRA4P48169 554 aa22.78■■□□□ 1.24
VARS-217ENST00000440048 COL9A2Q14055 689 aaPredicted RBP22.78■■□□□ 1.24
VARS-217ENST00000440048 CYP2A13Q16696 494 aa22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms