RNA–Protein interactions for RNA: ENST00000439185.1

UPP2-IT1-201, UPP2 intronic transcript 1, humanhuman

TSL 3 BASIC

Gene UPP2-IT1, Length 357 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPP2-IT1-201ENST00000439185 NTRK2Q16620 822 aa3.21□□□□□ -1.9
UPP2-IT1-201ENST00000439185 TMCO3Q6UWJ1 677 aa3.21□□□□□ -1.9
UPP2-IT1-201ENST00000439185 LINGO4Q6UY18 593 aa3.21□□□□□ -1.9
UPP2-IT1-201ENST00000439185 PTAR1Q7Z6K3 402 aaPredicted RBP3.21□□□□□ -1.9
UPP2-IT1-201ENST00000439185 LACC1Q8IV20 430 aa3.21□□□□□ -1.9
UPP2-IT1-201ENST00000439185 PAPD5Q8NDF8 572 aaKnown RBP3.21□□□□□ -1.9
UPP2-IT1-201ENST00000439185 PRSS33Q8NF86 280 aa3.21□□□□□ -1.9
UPP2-IT1-201ENST00000439185 ZPLD1Q8TCW7 415 aa3.21□□□□□ -1.9
UPP2-IT1-201ENST00000439185 PTPMT1Q8WUK0 201 aaPredicted RBP3.21□□□□□ -1.9
UPP2-IT1-201ENST00000439185 DYRK2Q92630 601 aa3.21□□□□□ -1.9
UPP2-IT1-201ENST00000439185 JAKMIP2Q96AA8 810 aa3.21□□□□□ -1.9
UPP2-IT1-201ENST00000439185 SLC22A18Q96BI1 424 aa3.21□□□□□ -1.9
UPP2-IT1-201ENST00000439185 RSRC1Q96IZ7 334 aaKnown RBP3.21□□□□□ -1.9
UPP2-IT1-201ENST00000439185 USP28Q96RU2 1077 aa3.21□□□□□ -1.9
UPP2-IT1-201ENST00000439185 C16orf70Q9BSU1 422 aa3.21□□□□□ -1.9
UPP2-IT1-201ENST00000439185 ABHD6Q9BV23 337 aa3.21□□□□□ -1.9
UPP2-IT1-201ENST00000439185 DGCR6LQ9BY27 220 aa3.21□□□□□ -1.9
UPP2-IT1-201ENST00000439185 PCDHGB4Q9UN71 923 aa3.21□□□□□ -1.9
UPP2-IT1-201ENST00000439185 WBP11Q9Y2W2 641 aaKnown RBP3.21□□□□□ -1.9
UPP2-IT1-201ENST00000439185 RIPK3Q9Y572 518 aa3.21□□□□□ -1.9
UPP2-IT1-201ENST00000439185 SPIN1Q9Y657 262 aaPredicted RBP3.21□□□□□ -1.9
UPP2-IT1-201ENST00000439185 ZNF646O15015 1829 aaPredicted RBP3.21□□□□□ -1.9
UPP2-IT1-201ENST00000439185 LOC102723996A0A087X1L8 192 aa3.2□□□□□ -1.9
UPP2-IT1-201ENST00000439185 HEPACAM2A8MVW5 462 aa3.2□□□□□ -1.9
UPP2-IT1-201ENST00000439185 PRAMEF11O60813 436 aa3.2□□□□□ -1.9
UPP2-IT1-201ENST00000439185 ZWINTO95229 277 aa3.2□□□□□ -1.9
UPP2-IT1-201ENST00000439185 GPIP06744 558 aa3.2□□□□□ -1.9
UPP2-IT1-201ENST00000439185 EIF2DP41214 584 aaKnown RBP3.2□□□□□ -1.9
UPP2-IT1-201ENST00000439185 STAT2P52630 851 aa3.2□□□□□ -1.9
UPP2-IT1-201ENST00000439185 HUNKP57058 714 aa3.2□□□□□ -1.9
UPP2-IT1-201ENST00000439185 PSMC6P62333 389 aa3.2□□□□□ -1.9
UPP2-IT1-201ENST00000439185 CDK3Q00526 305 aa3.2□□□□□ -1.9
UPP2-IT1-201ENST00000439185 PNRC1Q12796 327 aaPredicted RBP3.2□□□□□ -1.9
UPP2-IT1-201ENST00000439185 STK4Q13043 487 aa3.2□□□□□ -1.9
UPP2-IT1-201ENST00000439185 NFATC2Q13469 925 aa3.2□□□□□ -1.9
UPP2-IT1-201ENST00000439185 IGSF11Q5DX21 431 aa3.2□□□□□ -1.9
UPP2-IT1-201ENST00000439185 GRTP1Q5TC63 336 aa3.2□□□□□ -1.9
UPP2-IT1-201ENST00000439185 HOGA1Q86XE5 327 aa3.2□□□□□ -1.9
UPP2-IT1-201ENST00000439185 CEP57Q86XR8 500 aa3.2□□□□□ -1.9
UPP2-IT1-201ENST00000439185 GUF1Q8N442 669 aaKnown RBP3.2□□□□□ -1.9
UPP2-IT1-201ENST00000439185 CPSF7Q8N684 471 aaKnown RBP3.2□□□□□ -1.9
UPP2-IT1-201ENST00000439185 MCUQ8NE86 351 aa3.2□□□□□ -1.9
UPP2-IT1-201ENST00000439185 OR5AP2Q8NGF4 316 aa3.2□□□□□ -1.9
UPP2-IT1-201ENST00000439185 PRPF31Q8WWY3 499 aaKnown RBP3.2□□□□□ -1.9
UPP2-IT1-201ENST00000439185 SGK494Q96LW2 274 aa3.2□□□□□ -1.9
UPP2-IT1-201ENST00000439185 CDRT15Q96T59 188 aa3.2□□□□□ -1.9
UPP2-IT1-201ENST00000439185 KRT12Q99456 494 aa3.2□□□□□ -1.9
UPP2-IT1-201ENST00000439185 MRPL1Q9BYD6 325 aaKnown RBP3.2□□□□□ -1.9
UPP2-IT1-201ENST00000439185 ATP13A3Q9H7F0 1226 aa3.2□□□□□ -1.9
UPP2-IT1-201ENST00000439185 GPR83Q9NYM4 423 aa3.2□□□□□ -1.9
UPP2-IT1-201ENST00000439185 THEGQ9P2T0 379 aa3.2□□□□□ -1.9
UPP2-IT1-201ENST00000439185 RHCGQ9UBD6 479 aa3.2□□□□□ -1.9
UPP2-IT1-201ENST00000439185 IGHV3OR16-10A0A075B7F0 116 aa3.19□□□□□ -1.9
UPP2-IT1-201ENST00000439185 GPR75-ASB3A0A0A6YYF3 556 aa3.19□□□□□ -1.9
UPP2-IT1-201ENST00000439185 LOC101059948A0A1B0GTJ6 334 aa3.19□□□□□ -1.9
UPP2-IT1-201ENST00000439185 A0A1W2PPR1 153 aa3.19□□□□□ -1.9
UPP2-IT1-201ENST00000439185 A0A1W2PRB8 838 aa3.19□□□□□ -1.9
UPP2-IT1-201ENST00000439185 KLLNB2CW77 178 aa3.19□□□□□ -1.9
UPP2-IT1-201ENST00000439185 ZNF195O14628 629 aa3.19□□□□□ -1.9
UPP2-IT1-201ENST00000439185 PRKRAO75569 313 aaKnown RBP3.19□□□□□ -1.9
UPP2-IT1-201ENST00000439185 GJA1P17302 382 aa3.19□□□□□ -1.9
UPP2-IT1-201ENST00000439185 RBMS1P29558 406 aaKnown RBP3.19□□□□□ -1.9
UPP2-IT1-201ENST00000439185 ACTN2P35609 894 aa3.19□□□□□ -1.9
UPP2-IT1-201ENST00000439185 TAF13Q15543 124 aa3.19□□□□□ -1.9
UPP2-IT1-201ENST00000439185 CFAP161Q6P656 301 aa3.19□□□□□ -1.9
UPP2-IT1-201ENST00000439185 FIGLAQ6QHK4 219 aa3.19□□□□□ -1.9
UPP2-IT1-201ENST00000439185 FIP1L1Q6UN15 594 aaKnown RBP3.19□□□□□ -1.9
UPP2-IT1-201ENST00000439185 Q6ZRP5 223 aa3.19□□□□□ -1.9
UPP2-IT1-201ENST00000439185 ADGRA1Q86SQ6 560 aa3.19□□□□□ -1.9
UPP2-IT1-201ENST00000439185 HPS6Q86YV9 775 aa3.19□□□□□ -1.9
UPP2-IT1-201ENST00000439185 LINC00346Q8IVM7 164 aa3.19□□□□□ -1.9
UPP2-IT1-201ENST00000439185 MINDY1Q8N5J2 469 aa3.19□□□□□ -1.9
UPP2-IT1-201ENST00000439185 PPFIBP2Q8ND30 876 aa3.19□□□□□ -1.9
UPP2-IT1-201ENST00000439185 MOSPD2Q8NHP6 518 aa3.19□□□□□ -1.9
UPP2-IT1-201ENST00000439185 WWTR1Q9GZV5 400 aa3.19□□□□□ -1.9
UPP2-IT1-201ENST00000439185 PANK4Q9NVE7 773 aa3.19□□□□□ -1.9
UPP2-IT1-201ENST00000439185 MRPL15Q9P015 296 aaKnown RBP3.19□□□□□ -1.9
UPP2-IT1-201ENST00000439185 MUTYHQ9UIF7 546 aa3.19□□□□□ -1.9
UPP2-IT1-201ENST00000439185 ZDHHC2Q9UIJ5 367 aa3.19□□□□□ -1.9
UPP2-IT1-201ENST00000439185 FBXO2Q9UK22 296 aaPredicted RBP3.19□□□□□ -1.9
UPP2-IT1-201ENST00000439185 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.19□□□□□ -1.9
UPP2-IT1-201ENST00000439185 SNX8Q9Y5X2 465 aa3.19□□□□□ -1.9
UPP2-IT1-201ENST00000439185 SOS1Q07889 1333 aaPredicted RBP3.19□□□□□ -1.9
UPP2-IT1-201ENST00000439185 GLOD5A6NK44 160 aa3.18□□□□□ -1.9
UPP2-IT1-201ENST00000439185 A8MV72 311 aaPredicted RBP3.18□□□□□ -1.9
UPP2-IT1-201ENST00000439185 K7ENM7 598 aa3.18□□□□□ -1.9
UPP2-IT1-201ENST00000439185 BCL2L11O43521 198 aa3.18□□□□□ -1.9
UPP2-IT1-201ENST00000439185 XRCC3O43542 346 aa3.18□□□□□ -1.9
UPP2-IT1-201ENST00000439185 IDH3BO43837 385 aa3.18□□□□□ -1.9
UPP2-IT1-201ENST00000439185 TSPAN1O60635 241 aa3.18□□□□□ -1.9
UPP2-IT1-201ENST00000439185 MED24O75448 989 aa3.18□□□□□ -1.9
UPP2-IT1-201ENST00000439185 BEST1O76090 585 aa3.18□□□□□ -1.9
UPP2-IT1-201ENST00000439185 PGM3O95394 542 aa3.18□□□□□ -1.9
UPP2-IT1-201ENST00000439185 IGHV3-13P01766 116 aa3.18□□□□□ -1.9
UPP2-IT1-201ENST00000439185 DUX4L4P0CJ87 422 aa3.18□□□□□ -1.9
UPP2-IT1-201ENST00000439185 GABRA5P31644 462 aa3.18□□□□□ -1.9
UPP2-IT1-201ENST00000439185 MMP12P39900 470 aa3.18□□□□□ -1.9
UPP2-IT1-201ENST00000439185 BAATQ14032 418 aaPredicted RBP3.18□□□□□ -1.9
UPP2-IT1-201ENST00000439185 MDH1BQ5I0G3 518 aa3.18□□□□□ -1.9
UPP2-IT1-201ENST00000439185 TEX38Q6PEX7 206 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms