RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 SNNO75324 88 aaPredicted RBP3.53□□□□□ -1.84
HMGB1P12-201ENST00000438594 TRIM3O75382 744 aaPredicted RBP3.53□□□□□ -1.84
HMGB1P12-201ENST00000438594 CLN5O75503 358 aa3.53□□□□□ -1.84
HMGB1P12-201ENST00000438594 CSDE1O75534 798 aaKnown RBP3.53□□□□□ -1.84
HMGB1P12-201ENST00000438594 ITGA10O75578 1167 aa3.53□□□□□ -1.84
HMGB1P12-201ENST00000438594 CRTAPO75718 401 aaPredicted RBP3.53□□□□□ -1.84
HMGB1P12-201ENST00000438594 CLPXO76031 633 aa3.53□□□□□ -1.84
HMGB1P12-201ENST00000438594 PDE9AO76083 593 aa3.53□□□□□ -1.84
HMGB1P12-201ENST00000438594 KDM4BO94953 1096 aa3.53□□□□□ -1.84
HMGB1P12-201ENST00000438594 OR5F1O95221 314 aa3.53□□□□□ -1.84
HMGB1P12-201ENST00000438594 TGM6O95932 706 aa3.53□□□□□ -1.84
HMGB1P12-201ENST00000438594 PRR23D2P0DMB1 279 aaPredicted RBP3.53□□□□□ -1.84
HMGB1P12-201ENST00000438594 APEHP13798 732 aaKnown RBP3.53□□□□□ -1.84
HMGB1P12-201ENST00000438594 IL2RBP14784 551 aa3.53□□□□□ -1.84
HMGB1P12-201ENST00000438594 LBPP18428 481 aa3.53□□□□□ -1.84
HMGB1P12-201ENST00000438594 CYP2B6P20813 491 aa3.53□□□□□ -1.84
HMGB1P12-201ENST00000438594 ATP6V1C1P21283 382 aa3.53□□□□□ -1.84
HMGB1P12-201ENST00000438594 MMP8P22894 467 aa3.53□□□□□ -1.84
HMGB1P12-201ENST00000438594 TUBG1P23258 451 aa3.53□□□□□ -1.84
HMGB1P12-201ENST00000438594 DNASE1P24855 282 aa3.53□□□□□ -1.84
HMGB1P12-201ENST00000438594 YY1P25490 414 aa3.53□□□□□ -1.84
HMGB1P12-201ENST00000438594 KLRC2P26717 231 aa3.53□□□□□ -1.84
HMGB1P12-201ENST00000438594 CCND3P30281 292 aaPredicted RBP3.53□□□□□ -1.84
HMGB1P12-201ENST00000438594 RYKP34925 604 aa3.53□□□□□ -1.84
HMGB1P12-201ENST00000438594 PBX1P40424 430 aa3.53□□□□□ -1.84
HMGB1P12-201ENST00000438594 CETN2P41208 172 aa3.53□□□□□ -1.84
HMGB1P12-201ENST00000438594 CCT8P50990 548 aa3.53□□□□□ -1.84
HMGB1P12-201ENST00000438594 CLCN3P51790 818 aa3.53□□□□□ -1.84
HMGB1P12-201ENST00000438594 FOXL2P58012 376 aa3.53□□□□□ -1.84
HMGB1P12-201ENST00000438594 DR1Q01658 176 aa3.53□□□□□ -1.84
HMGB1P12-201ENST00000438594 CDK18Q07002 472 aa3.53□□□□□ -1.84
HMGB1P12-201ENST00000438594 PPIDQ08752 370 aaKnown RBP3.53□□□□□ -1.84
HMGB1P12-201ENST00000438594 TRAP1Q12931 704 aaKnown RBP3.53□□□□□ -1.84
HMGB1P12-201ENST00000438594 IL18Q14116 193 aa3.53□□□□□ -1.84
HMGB1P12-201ENST00000438594 FGFBP1Q14512 234 aa3.53□□□□□ -1.84
HMGB1P12-201ENST00000438594 PTPRCAPQ14761 206 aa3.53□□□□□ -1.84
HMGB1P12-201ENST00000438594 IQCB1Q15051 598 aa3.53□□□□□ -1.84
HMGB1P12-201ENST00000438594 ACOX1Q15067 660 aa3.53□□□□□ -1.84
HMGB1P12-201ENST00000438594 BCL2A1Q16548 175 aa3.53□□□□□ -1.84
HMGB1P12-201ENST00000438594 SLC18A3Q16572 532 aa3.53□□□□□ -1.84
HMGB1P12-201ENST00000438594 SYT16Q17RD7 645 aa3.53□□□□□ -1.84
HMGB1P12-201ENST00000438594 MGAT5BQ3V5L5 792 aa3.53□□□□□ -1.84
HMGB1P12-201ENST00000438594 HIKESHIQ53FT3 197 aa3.53□□□□□ -1.84
HMGB1P12-201ENST00000438594 CXorf66Q5JRM2 361 aaPredicted RBP3.53□□□□□ -1.84
HMGB1P12-201ENST00000438594 EFHC1Q5JVL4 640 aa3.53□□□□□ -1.84
HMGB1P12-201ENST00000438594 PHYHD1Q5SRE7 291 aa3.53□□□□□ -1.84
HMGB1P12-201ENST00000438594 GRTP1Q5TC63 336 aa3.53□□□□□ -1.84
HMGB1P12-201ENST00000438594 AGBL2Q5U5Z8 902 aa3.53□□□□□ -1.84
HMGB1P12-201ENST00000438594 TMEM198Q66K66 360 aa3.53□□□□□ -1.84
HMGB1P12-201ENST00000438594 ATG9BQ674R7 924 aa3.53□□□□□ -1.84
HMGB1P12-201ENST00000438594 NCR3LG1Q68D85 454 aa3.53□□□□□ -1.84
HMGB1P12-201ENST00000438594 KCTD11Q693B1 232 aa3.53□□□□□ -1.84
HMGB1P12-201ENST00000438594 CASC4Q6P4E1 433 aa3.53□□□□□ -1.84
HMGB1P12-201ENST00000438594 Q6ZNX1 250 aa3.53□□□□□ -1.84
HMGB1P12-201ENST00000438594 SEPT14Q6ZU15 432 aa3.53□□□□□ -1.84
HMGB1P12-201ENST00000438594 CDR2LQ86X02 465 aaPredicted RBP3.53□□□□□ -1.84
HMGB1P12-201ENST00000438594 CENPLQ8N0S6 344 aaPredicted RBP3.53□□□□□ -1.84
HMGB1P12-201ENST00000438594 PYROXD2Q8N2H3 581 aa3.53□□□□□ -1.84
HMGB1P12-201ENST00000438594 RNF148Q8N7C7 305 aa3.53□□□□□ -1.84
HMGB1P12-201ENST00000438594 C11orf65Q8NCR3 313 aa3.53□□□□□ -1.84
HMGB1P12-201ENST00000438594 TRPV1Q8NER1 839 aa3.53□□□□□ -1.84
HMGB1P12-201ENST00000438594 RDM1Q8NG50 284 aa3.53□□□□□ -1.84
HMGB1P12-201ENST00000438594 LKAAEAR1Q8TD35 194 aa3.53□□□□□ -1.84
HMGB1P12-201ENST00000438594 TSEN15Q8WW01 171 aaKnown RBP3.53□□□□□ -1.84
HMGB1P12-201ENST00000438594 ASZ1Q8WWH4 475 aa3.53□□□□□ -1.84
HMGB1P12-201ENST00000438594 OVCA2Q8WZ82 227 aa3.53□□□□□ -1.84
HMGB1P12-201ENST00000438594 NPIPB3Q92617 1050 aa3.53□□□□□ -1.84
HMGB1P12-201ENST00000438594 SCAMP4Q969E2 229 aa3.53□□□□□ -1.84
HMGB1P12-201ENST00000438594 ESAMQ96AP7 390 aa3.53□□□□□ -1.84
HMGB1P12-201ENST00000438594 KIAA1143Q96AT1 154 aaPredicted RBP3.53□□□□□ -1.84
HMGB1P12-201ENST00000438594 OXNAD1Q96HP4 312 aaPredicted RBP3.53□□□□□ -1.84
HMGB1P12-201ENST00000438594 ZNF668Q96K58 619 aaPredicted RBP3.53□□□□□ -1.84
HMGB1P12-201ENST00000438594 C12orf66Q96MD2 445 aa3.53□□□□□ -1.84
HMGB1P12-201ENST00000438594 VKORC1Q9BQB6 163 aa3.53□□□□□ -1.84
HMGB1P12-201ENST00000438594 C11orf70Q9BRQ4 267 aa3.53□□□□□ -1.84
HMGB1P12-201ENST00000438594 NPLQ9BXD5 320 aaPredicted RBP3.53□□□□□ -1.84
HMGB1P12-201ENST00000438594 SPZ1Q9BXG8 430 aa3.53□□□□□ -1.84
HMGB1P12-201ENST00000438594 TTYH3Q9C0H2 523 aa3.53□□□□□ -1.84
HMGB1P12-201ENST00000438594 ADNPQ9H2P0 1102 aa3.53□□□□□ -1.84
HMGB1P12-201ENST00000438594 KLK15Q9H2R5 256 aa3.53□□□□□ -1.84
HMGB1P12-201ENST00000438594 MMP27Q9H306 513 aa3.53□□□□□ -1.84
HMGB1P12-201ENST00000438594 HIPK3Q9H422 1215 aa3.53□□□□□ -1.84
HMGB1P12-201ENST00000438594 FN3KRPQ9HA64 309 aa3.53□□□□□ -1.84
HMGB1P12-201ENST00000438594 RANGRFQ9HD47 186 aaPredicted RBP3.53□□□□□ -1.84
HMGB1P12-201ENST00000438594 MMP25Q9NPA2 562 aa3.53□□□□□ -1.84
HMGB1P12-201ENST00000438594 MKKSQ9NPJ1 570 aaPredicted RBP3.53□□□□□ -1.84
HMGB1P12-201ENST00000438594 TUBG2Q9NRH3 451 aa3.53□□□□□ -1.84
HMGB1P12-201ENST00000438594 SLC22A11Q9NSA0 550 aa3.53□□□□□ -1.84
HMGB1P12-201ENST00000438594 ASNSD1Q9NWL6 643 aa3.53□□□□□ -1.84
HMGB1P12-201ENST00000438594 ASB6Q9NWX5 421 aa3.53□□□□□ -1.84
HMGB1P12-201ENST00000438594 TMEM161AQ9NX61 479 aa3.53□□□□□ -1.84
HMGB1P12-201ENST00000438594 MTMR10Q9NXD2 777 aa3.53□□□□□ -1.84
HMGB1P12-201ENST00000438594 WWOXQ9NZC7 414 aa3.53□□□□□ -1.84
HMGB1P12-201ENST00000438594 WNT16Q9UBV4 365 aa3.53□□□□□ -1.84
HMGB1P12-201ENST00000438594 PEF1Q9UBV8 284 aaKnown RBP3.53□□□□□ -1.84
HMGB1P12-201ENST00000438594 KLQ9UEF7 1012 aa3.53□□□□□ -1.84
HMGB1P12-201ENST00000438594 IL17BQ9UHF5 180 aa3.53□□□□□ -1.84
HMGB1P12-201ENST00000438594 ATPIF1Q9UII2 106 aa3.53□□□□□ -1.84
HMGB1P12-201ENST00000438594 PLA2G4CQ9UP65 541 aa3.53□□□□□ -1.84
HMGB1P12-201ENST00000438594 SLC12A4Q9UP95 1085 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms