RNA–Protein interactions for RNA: ENST00000438571.5

GTF3A-204, Transcript of general transcription factor IIIA, humanhuman

TSL 5

Gene GTF3A, Length 792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-204ENST00000438571 C4orf17Q53FE4 359 aa17.47■□□□□ 0.39
GTF3A-204ENST00000438571 DCAF10Q5QP82 559 aa17.47■□□□□ 0.39
GTF3A-204ENST00000438571 VWA5B1Q5TIE3 1220 aa17.47■□□□□ 0.39
GTF3A-204ENST00000438571 PPP1R21Q6ZMI0 780 aa17.47■□□□□ 0.39
GTF3A-204ENST00000438571 LURAP1LQ8IV03 231 aa17.47■□□□□ 0.39
GTF3A-204ENST00000438571 SLC22A15Q8IZD6 547 aa17.47■□□□□ 0.39
GTF3A-204ENST00000438571 OR2Y1Q8NGV0 311 aa17.47■□□□□ 0.39
GTF3A-204ENST00000438571 CFAP61Q8NHU2 1237 aa17.47■□□□□ 0.39
GTF3A-204ENST00000438571 ZDHHC19Q8WVZ1 309 aaPredicted RBP17.47■□□□□ 0.39
GTF3A-204ENST00000438571 SNRNP40Q96DI7 357 aaKnown RBP17.47■□□□□ 0.39
GTF3A-204ENST00000438571 BAG1Q99933 345 aaPredicted RBP17.47■□□□□ 0.39
GTF3A-204ENST00000438571 ZNF552Q9H707 407 aaPredicted RBP17.47■□□□□ 0.39
GTF3A-204ENST00000438571 TXLNGQ9NUQ3 528 aa17.47■□□□□ 0.39
GTF3A-204ENST00000438571 P4HTMQ9NXG6 502 aa17.47■□□□□ 0.39
GTF3A-204ENST00000438571 MARCH4Q9P2E8 410 aaPredicted RBP17.47■□□□□ 0.39
GTF3A-204ENST00000438571 G3BP2Q9UN86 482 aaKnown RBP17.47■□□□□ 0.39
GTF3A-204ENST00000438571 CSAG2Q9Y5P2 127 aa17.47■□□□□ 0.39
GTF3A-204ENST00000438571 CPAMD8Q8IZJ3 1885 aa17.47■□□□□ 0.39
GTF3A-204ENST00000438571 HEATR9A2RTY3 570 aa17.46■□□□□ 0.39
GTF3A-204ENST00000438571 SUN1O94901 812 aa17.46■□□□□ 0.39
GTF3A-204ENST00000438571 RAB28P51157 221 aa17.46■□□□□ 0.39
GTF3A-204ENST00000438571 KIR2DS3Q14952 304 aa17.46■□□□□ 0.39
GTF3A-204ENST00000438571 NKAIN1Q4KMZ8 207 aa17.46■□□□□ 0.39
GTF3A-204ENST00000438571 COX15Q7KZN9 410 aa17.46■□□□□ 0.39
GTF3A-204ENST00000438571 LINC00523Q86TU6 105 aa17.46■□□□□ 0.39
GTF3A-204ENST00000438571 SYCE1Q8N0S2 351 aa17.46■□□□□ 0.39
GTF3A-204ENST00000438571 GALNT16Q8N428 558 aa17.46■□□□□ 0.39
GTF3A-204ENST00000438571 C1orf54Q8WWF1 131 aa17.46■□□□□ 0.39
GTF3A-204ENST00000438571 RANBP9Q96S59 729 aa17.46■□□□□ 0.39
GTF3A-204ENST00000438571 ASF1BQ9NVP2 202 aa17.46■□□□□ 0.39
GTF3A-204ENST00000438571 EURLQ9NYK6 297 aa17.46■□□□□ 0.39
GTF3A-204ENST00000438571 SRPK3Q9UPE1 567 aa17.46■□□□□ 0.39
GTF3A-204ENST00000438571 PLCL2Q9UPR0 1127 aa17.46■□□□□ 0.39
GTF3A-204ENST00000438571 RUVBL2Q9Y230 463 aaKnown RBP17.46■□□□□ 0.39
GTF3A-204ENST00000438571 TCAF1Q9Y4C2 921 aa17.46■□□□□ 0.39
GTF3A-204ENST00000438571 NRP2O60462 931 aa17.45■□□□□ 0.38
GTF3A-204ENST00000438571 GPC4O75487 556 aa17.45■□□□□ 0.38
GTF3A-204ENST00000438571 ZSCAN5DPP0CG00 497 aa17.45■□□□□ 0.38
GTF3A-204ENST00000438571 GRIA3P42263 894 aa17.45■□□□□ 0.38
GTF3A-204ENST00000438571 SNX1Q13596 522 aa17.45■□□□□ 0.38
GTF3A-204ENST00000438571 MYBPC3Q14896 1274 aa17.45■□□□□ 0.38
GTF3A-204ENST00000438571 NR6A1Q15406 480 aa17.45■□□□□ 0.38
GTF3A-204ENST00000438571 CCSMST1Q4G0I0 132 aa17.45■□□□□ 0.38
GTF3A-204ENST00000438571 FCRL6Q6DN72 434 aa17.45■□□□□ 0.38
GTF3A-204ENST00000438571 TLDC1Q6P9B6 456 aa17.45■□□□□ 0.38
GTF3A-204ENST00000438571 TTLL10Q6ZVT0 673 aa17.45■□□□□ 0.38
GTF3A-204ENST00000438571 CISD2Q8N5K1 135 aaKnown RBP17.45■□□□□ 0.38
GTF3A-204ENST00000438571 METTL27Q8N6F8 245 aaPredicted RBP17.45■□□□□ 0.38
GTF3A-204ENST00000438571 OR6P1Q8NGX9 317 aa17.45■□□□□ 0.38
GTF3A-204ENST00000438571 OR4L1Q8NH43 312 aa17.45■□□□□ 0.38
GTF3A-204ENST00000438571 PRR7Q8TB68 274 aa17.45■□□□□ 0.38
GTF3A-204ENST00000438571 C5AR2Q9P296 337 aa17.45■□□□□ 0.38
GTF3A-204ENST00000438571 NTNG1Q9Y2I2 539 aa17.45■□□□□ 0.38
GTF3A-204ENST00000438571 NFS1Q9Y697 457 aa17.45■□□□□ 0.38
GTF3A-204ENST00000438571 MED26O95402 600 aa17.44■□□□□ 0.38
GTF3A-204ENST00000438571 CD9P21926 228 aa17.44■□□□□ 0.38
GTF3A-204ENST00000438571 ADRA1DP25100 572 aa17.44■□□□□ 0.38
GTF3A-204ENST00000438571 PSMB5P28074 263 aa17.44■□□□□ 0.38
GTF3A-204ENST00000438571 BDKRB1P46663 353 aa17.44■□□□□ 0.38
GTF3A-204ENST00000438571 CRADDP78560 199 aa17.44■□□□□ 0.38
GTF3A-204ENST00000438571 KIF5AQ12840 1032 aa17.44■□□□□ 0.38
GTF3A-204ENST00000438571 DNAJC21Q5F1R6 531 aaKnown RBP17.44■□□□□ 0.38
GTF3A-204ENST00000438571 SHISA6Q6ZSJ9 500 aa17.44■□□□□ 0.38
GTF3A-204ENST00000438571 GAS2L3Q86XJ1 694 aa17.44■□□□□ 0.38
GTF3A-204ENST00000438571 HPS6Q86YV9 775 aa17.44■□□□□ 0.38
GTF3A-204ENST00000438571 DCUN1D3Q8IWE4 304 aa17.44■□□□□ 0.38
GTF3A-204ENST00000438571 CLEC1AQ8NC01 280 aa17.44■□□□□ 0.38
GTF3A-204ENST00000438571 FER1L6-AS2Q96M78 137 aa17.44■□□□□ 0.38
GTF3A-204ENST00000438571 C17orf62Q9BQA9 187 aa17.44■□□□□ 0.38
GTF3A-204ENST00000438571 MESP1Q9BRJ9 268 aa17.44■□□□□ 0.38
GTF3A-204ENST00000438571 NDC1Q9BTX1 674 aa17.44■□□□□ 0.38
GTF3A-204ENST00000438571 SLC6A20Q9NP91 592 aa17.44■□□□□ 0.38
GTF3A-204ENST00000438571 RAB6BQ9NRW1 208 aa17.44■□□□□ 0.38
GTF3A-204ENST00000438571 RIMKLBQ9ULI2 386 aa17.44■□□□□ 0.38
GTF3A-204ENST00000438571 TEX15Q9BXT5 2789 aa17.43■□□□□ 0.38
GTF3A-204ENST00000438571 ERI2A8K979 691 aaKnown RBP17.43■□□□□ 0.38
GTF3A-204ENST00000438571 PEX12O00623 359 aa17.43■□□□□ 0.38
GTF3A-204ENST00000438571 ALAS2P22557 587 aa17.43■□□□□ 0.38
GTF3A-204ENST00000438571 COL8A1P27658 744 aa17.43■□□□□ 0.38
GTF3A-204ENST00000438571 AOAHP28039 575 aa17.43■□□□□ 0.38
GTF3A-204ENST00000438571 FDFT1P37268 417 aa17.43■□□□□ 0.38
GTF3A-204ENST00000438571 PRAMEP78395 509 aa17.43■□□□□ 0.38
GTF3A-204ENST00000438571 PLOD1Q02809 727 aaPredicted RBP17.43■□□□□ 0.38
GTF3A-204ENST00000438571 FASTKD1Q53R41 847 aaKnown RBP17.43■□□□□ 0.38
GTF3A-204ENST00000438571 SEL1L2Q5TEA6 688 aa17.43■□□□□ 0.38
GTF3A-204ENST00000438571 LYPLAL1Q5VWZ2 237 aa17.43■□□□□ 0.38
GTF3A-204ENST00000438571 SLC13A5Q86YT5 568 aaPredicted RBP17.43■□□□□ 0.38
GTF3A-204ENST00000438571 MCATQ8IVS2 390 aaKnown RBP17.43■□□□□ 0.38
GTF3A-204ENST00000438571 IQCKQ8N0W5 287 aa17.43■□□□□ 0.38
GTF3A-204ENST00000438571 PTERQ96BW5 349 aa17.43■□□□□ 0.38
GTF3A-204ENST00000438571 SPSB2Q99619 263 aa17.43■□□□□ 0.38
GTF3A-204ENST00000438571 CARD6Q9BX69 1037 aa17.43■□□□□ 0.38
GTF3A-204ENST00000438571 SLC29A3Q9BZD2 475 aa17.43■□□□□ 0.38
GTF3A-204ENST00000438571 CHRAC1Q9NRG0 131 aa17.43■□□□□ 0.38
GTF3A-204ENST00000438571 ERRFI1Q9UJM3 462 aaPredicted RBP17.43■□□□□ 0.38
GTF3A-204ENST00000438571 B3GNT3Q9Y2A9 372 aa17.43■□□□□ 0.38
GTF3A-204ENST00000438571 SCN2AQ99250 2005 aa17.42■□□□□ 0.38
GTF3A-204ENST00000438571 E7EVH7 732 aa17.42■□□□□ 0.38
GTF3A-204ENST00000438571 SOCS6O14544 535 aa17.42■□□□□ 0.38
GTF3A-204ENST00000438571 YBX1P67809 324 aaKnown RBP17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms