RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 BOLA2-SMG1P6H3BVE0 249 aa6.54□□□□□ -1.36
CSDE1-205ENST00000438362 ARVCFO00192 962 aa6.54□□□□□ -1.36
CSDE1-205ENST00000438362 MAGEB3O15480 346 aa6.54□□□□□ -1.36
CSDE1-205ENST00000438362 XPNPEP2O43895 674 aa6.54□□□□□ -1.36
CSDE1-205ENST00000438362 SERPINB7O75635 380 aa6.54□□□□□ -1.36
CSDE1-205ENST00000438362 DIRAS1O95057 198 aa6.54□□□□□ -1.36
CSDE1-205ENST00000438362 RPN2P04844 631 aa6.54□□□□□ -1.36
CSDE1-205ENST00000438362 IFNW1P05000 195 aa6.54□□□□□ -1.36
CSDE1-205ENST00000438362 NR2F1P10589 423 aa6.54□□□□□ -1.36
CSDE1-205ENST00000438362 CHRM1P11229 460 aaPredicted RBP6.54□□□□□ -1.36
CSDE1-205ENST00000438362 CXCR2P25025 360 aa6.54□□□□□ -1.36
CSDE1-205ENST00000438362 OXTRP30559 389 aa6.54□□□□□ -1.36
CSDE1-205ENST00000438362 MCCD1P59942 119 aaPredicted RBP6.54□□□□□ -1.36
CSDE1-205ENST00000438362 CREB5Q02930 508 aa6.54□□□□□ -1.36
CSDE1-205ENST00000438362 RING1Q06587 406 aa6.54□□□□□ -1.36
CSDE1-205ENST00000438362 C2orf80Q0P641 193 aa6.54□□□□□ -1.36
CSDE1-205ENST00000438362 CHRNA6Q15825 494 aa6.54□□□□□ -1.36
CSDE1-205ENST00000438362 POM121L1PQ3SYA9 428 aa6.54□□□□□ -1.36
CSDE1-205ENST00000438362 CEP78Q5JTW2 689 aa6.54□□□□□ -1.36
CSDE1-205ENST00000438362 PAGE3Q5JUK9 113 aa6.54□□□□□ -1.36
CSDE1-205ENST00000438362 FRG2Q64ET8 278 aa6.54□□□□□ -1.36
CSDE1-205ENST00000438362 MZT2BQ6NZ67 158 aa6.54□□□□□ -1.36
CSDE1-205ENST00000438362 DEF8Q6ZN54 512 aa6.54□□□□□ -1.36
CSDE1-205ENST00000438362 USP43Q70EL4 1123 aa6.54□□□□□ -1.36
CSDE1-205ENST00000438362 LRRTM3Q86VH5 581 aa6.54□□□□□ -1.36
CSDE1-205ENST00000438362 CARM1Q86X55 608 aa6.54□□□□□ -1.36
CSDE1-205ENST00000438362 FUBP1Q96AE4 644 aaKnown RBP6.54□□□□□ -1.36
CSDE1-205ENST00000438362 FRG2BQ96QU4 278 aa6.54□□□□□ -1.36
CSDE1-205ENST00000438362 TOR4AQ9NXH8 423 aa6.54□□□□□ -1.36
CSDE1-205ENST00000438362 PCTPQ9UKL6 214 aa6.54□□□□□ -1.36
CSDE1-205ENST00000438362 SLC9A8Q9Y2E8 581 aa6.54□□□□□ -1.36
CSDE1-205ENST00000438362 A0A1W2PQ67 120 aa6.54□□□□□ -1.36
CSDE1-205ENST00000438362 OR2AG2A6NM03 316 aa6.54□□□□□ -1.36
CSDE1-205ENST00000438362 H0Y858 1186 aa6.54□□□□□ -1.36
CSDE1-205ENST00000438362 PPP6CO00743 305 aa6.54□□□□□ -1.36
CSDE1-205ENST00000438362 ZNF195O14628 629 aa6.54□□□□□ -1.36
CSDE1-205ENST00000438362 INMTO95050 263 aa6.54□□□□□ -1.36
CSDE1-205ENST00000438362 FYNP06241 537 aa6.54□□□□□ -1.36
CSDE1-205ENST00000438362 SEMG2Q02383 582 aa6.54□□□□□ -1.36
CSDE1-205ENST00000438362 PIGFQ07326 219 aa6.54□□□□□ -1.36
CSDE1-205ENST00000438362 LAPTM4AQ15012 233 aa6.54□□□□□ -1.36
CSDE1-205ENST00000438362 RAB41Q5JT25 222 aa6.54□□□□□ -1.36
CSDE1-205ENST00000438362 COLEC12Q5KU26 742 aa6.54□□□□□ -1.36
CSDE1-205ENST00000438362 ATG9BQ674R7 924 aa6.54□□□□□ -1.36
CSDE1-205ENST00000438362 NANOGNBQ7Z5D8 188 aa6.54□□□□□ -1.36
CSDE1-205ENST00000438362 ARMC8Q8IUR7 673 aa6.54□□□□□ -1.36
CSDE1-205ENST00000438362 ALDH16A1Q8IZ83 802 aa6.54□□□□□ -1.36
CSDE1-205ENST00000438362 PAWRQ96IZ0 340 aaKnown RBP6.54□□□□□ -1.36
CSDE1-205ENST00000438362 ZNF607Q96SK3 696 aa6.54□□□□□ -1.36
CSDE1-205ENST00000438362 SMAD5Q99717 465 aaKnown RBP6.54□□□□□ -1.36
CSDE1-205ENST00000438362 CD244Q9BZW8 370 aa6.54□□□□□ -1.36
CSDE1-205ENST00000438362 FAM118AQ9NWS6 357 aa6.54□□□□□ -1.36
CSDE1-205ENST00000438362 CLCA2Q9UQC9 943 aa6.54□□□□□ -1.36
CSDE1-205ENST00000438362 ZNF510Q9Y2H8 683 aa6.54□□□□□ -1.36
CSDE1-205ENST00000438362 MAP4K5Q9Y4K4 846 aa6.54□□□□□ -1.36
CSDE1-205ENST00000438362 ABCA3Q99758 1704 aa6.53□□□□□ -1.36
CSDE1-205ENST00000438362 H3BM21 787 aa6.53□□□□□ -1.36
CSDE1-205ENST00000438362 H3BMQ9 156 aa6.53□□□□□ -1.36
CSDE1-205ENST00000438362 TSC22D2O75157 780 aa6.53□□□□□ -1.36
CSDE1-205ENST00000438362 POU2F1P14859 743 aa6.53□□□□□ -1.36
CSDE1-205ENST00000438362 CSKP41240 450 aa6.53□□□□□ -1.36
CSDE1-205ENST00000438362 MANFP55145 182 aaKnown RBP6.53□□□□□ -1.36
CSDE1-205ENST00000438362 GPR17Q13304 367 aa6.53□□□□□ -1.36
CSDE1-205ENST00000438362 RCAN2Q14206 197 aa6.53□□□□□ -1.36
CSDE1-205ENST00000438362 QPRTQ15274 297 aa6.53□□□□□ -1.36
CSDE1-205ENST00000438362 PSAPL1Q6NUJ1 521 aa6.53□□□□□ -1.36
CSDE1-205ENST00000438362 RGMBQ6NW40 437 aa6.53□□□□□ -1.36
CSDE1-205ENST00000438362 CDC73Q6P1J9 531 aa6.53□□□□□ -1.36
CSDE1-205ENST00000438362 MED27Q6P2C8 311 aa6.53□□□□□ -1.36
CSDE1-205ENST00000438362 KLHL17Q6TDP4 642 aa6.53□□□□□ -1.36
CSDE1-205ENST00000438362 LRRC70Q7Z2Q7 622 aa6.53□□□□□ -1.36
CSDE1-205ENST00000438362 SCD5Q86SK9 330 aa6.53□□□□□ -1.36
CSDE1-205ENST00000438362 RETREG3Q86VR2 466 aa6.53□□□□□ -1.36
CSDE1-205ENST00000438362 RGL4Q8IZJ4 473 aa6.53□□□□□ -1.36
CSDE1-205ENST00000438362 ARL14EPQ8N8R7 260 aaPredicted RBP6.53□□□□□ -1.36
CSDE1-205ENST00000438362 OR10G2Q8NGC3 310 aa6.53□□□□□ -1.36
CSDE1-205ENST00000438362 OR13J1Q8NGT2 312 aa6.53□□□□□ -1.36
CSDE1-205ENST00000438362 GTPBP3Q969Y2 492 aaKnown RBP6.53□□□□□ -1.36
CSDE1-205ENST00000438362 ACDQ96AP0 544 aa6.53□□□□□ -1.36
CSDE1-205ENST00000438362 RPL10LQ96L21 214 aaKnown RBP6.53□□□□□ -1.36
CSDE1-205ENST00000438362 COG8Q96MW5 612 aa6.53□□□□□ -1.36
CSDE1-205ENST00000438362 C11orf84Q9BUA3 381 aaPredicted RBP6.53□□□□□ -1.36
CSDE1-205ENST00000438362 SPATA5L1Q9BVQ7 753 aa6.53□□□□□ -1.36
CSDE1-205ENST00000438362 NPLQ9BXD5 320 aaPredicted RBP6.53□□□□□ -1.36
CSDE1-205ENST00000438362 R3HDMLQ9H3Y0 253 aa6.53□□□□□ -1.36
CSDE1-205ENST00000438362 TM9SF3Q9HD45 589 aa6.53□□□□□ -1.36
CSDE1-205ENST00000438362 ZDHHC3Q9NYG2 299 aa6.53□□□□□ -1.36
CSDE1-205ENST00000438362 GULP1Q9UBP9 304 aa6.53□□□□□ -1.36
CSDE1-205ENST00000438362 VPS29Q9UBQ0 182 aa6.53□□□□□ -1.36
CSDE1-205ENST00000438362 ZNF282Q9UDV7 671 aaPredicted RBP6.53□□□□□ -1.36
CSDE1-205ENST00000438362 ZNF221Q9UK13 617 aa6.53□□□□□ -1.36
CSDE1-205ENST00000438362 WDR37Q9Y2I8 494 aa6.53□□□□□ -1.36
CSDE1-205ENST00000438362 TMED5Q9Y3A6 229 aa6.53□□□□□ -1.36
CSDE1-205ENST00000438362 ST14Q9Y5Y6 855 aa6.53□□□□□ -1.36
CSDE1-205ENST00000438362 CPQQ9Y646 472 aa6.53□□□□□ -1.36
CSDE1-205ENST00000438362 MTMR11A4FU01 709 aa6.53□□□□□ -1.36
CSDE1-205ENST00000438362 PRR23AA6NEV1 266 aa6.53□□□□□ -1.36
CSDE1-205ENST00000438362 MPZL2O60487 215 aa6.53□□□□□ -1.36
CSDE1-205ENST00000438362 ATG13O75143 517 aa6.53□□□□□ -1.36
CSDE1-205ENST00000438362 GLUD1P00367 558 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms