RNA–Protein interactions for RNA: ENST00000436638.5

ECHDC1-208, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 3

Gene ECHDC1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-208ENST00000436638 PNCKQ6P2M8 343 aa6.07□□□□□ -1.44
ECHDC1-208ENST00000436638 FAM151BQ6UXP7 276 aa6.07□□□□□ -1.44
ECHDC1-208ENST00000436638 KYAT3Q6YP21 454 aaKnown RBP6.07□□□□□ -1.44
ECHDC1-208ENST00000436638 Q6ZSR6 202 aa6.07□□□□□ -1.44
ECHDC1-208ENST00000436638 TAS2R42Q7RTR8 314 aa6.07□□□□□ -1.44
ECHDC1-208ENST00000436638 NUP54Q7Z3B4 507 aa6.07□□□□□ -1.44
ECHDC1-208ENST00000436638 PTAR1Q7Z6K3 402 aaPredicted RBP6.07□□□□□ -1.44
ECHDC1-208ENST00000436638 TECPR1Q7Z6L1 1165 aa6.07□□□□□ -1.44
ECHDC1-208ENST00000436638 CCDC25Q86WR0 208 aa6.07□□□□□ -1.44
ECHDC1-208ENST00000436638 DCP2Q8IU60 420 aaKnown RBP6.07□□□□□ -1.44
ECHDC1-208ENST00000436638 P3H2Q8IVL5 708 aa6.07□□□□□ -1.44
ECHDC1-208ENST00000436638 PALM2Q8IXS6 379 aa6.07□□□□□ -1.44
ECHDC1-208ENST00000436638 SYTL1Q8IYJ3 562 aa6.07□□□□□ -1.44
ECHDC1-208ENST00000436638 PHACTR4Q8IZ21 702 aa6.07□□□□□ -1.44
ECHDC1-208ENST00000436638 TRAM1L1Q8N609 369 aa6.07□□□□□ -1.44
ECHDC1-208ENST00000436638 TP53I13Q8NBR0 393 aaPredicted RBP6.07□□□□□ -1.44
ECHDC1-208ENST00000436638 GPR26Q8NDV2 337 aa6.07□□□□□ -1.44
ECHDC1-208ENST00000436638 OR4K2Q8NGD2 314 aa6.07□□□□□ -1.44
ECHDC1-208ENST00000436638 OR13C4Q8NGS5 318 aa6.07□□□□□ -1.44
ECHDC1-208ENST00000436638 GOT1L1Q8NHS2 421 aaPredicted RBP6.07□□□□□ -1.44
ECHDC1-208ENST00000436638 ZNF398Q8TD17 642 aa6.07□□□□□ -1.44
ECHDC1-208ENST00000436638 PEX13Q92968 403 aa6.07□□□□□ -1.44
ECHDC1-208ENST00000436638 ART4Q93070 314 aa6.07□□□□□ -1.44
ECHDC1-208ENST00000436638 ZNF669Q96BR6 464 aaPredicted RBP6.07□□□□□ -1.44
ECHDC1-208ENST00000436638 ULK4Q96C45 1275 aa6.07□□□□□ -1.44
ECHDC1-208ENST00000436638 LRRC39Q96DD0 335 aa6.07□□□□□ -1.44
ECHDC1-208ENST00000436638 STAMBPL1Q96FJ0 436 aa6.07□□□□□ -1.44
ECHDC1-208ENST00000436638 DNAJC1Q96KC8 554 aaKnown RBP6.07□□□□□ -1.44
ECHDC1-208ENST00000436638 HS6ST2Q96MM7 605 aa6.07□□□□□ -1.44
ECHDC1-208ENST00000436638 COQ7Q99807 217 aa6.07□□□□□ -1.44
ECHDC1-208ENST00000436638 C19orf43Q9BQ61 176 aa6.07□□□□□ -1.44
ECHDC1-208ENST00000436638 NAT9Q9BTE0 207 aa6.07□□□□□ -1.44
ECHDC1-208ENST00000436638 ZSCAN5AQ9BUG6 496 aa6.07□□□□□ -1.44
ECHDC1-208ENST00000436638 RIOK2Q9BVS4 552 aaKnown RBP6.07□□□□□ -1.44
ECHDC1-208ENST00000436638 NUSAP1Q9BXS6 441 aaKnown RBP6.07□□□□□ -1.44
ECHDC1-208ENST00000436638 ARRDC1-AS1Q9H2J1 176 aa6.07□□□□□ -1.44
ECHDC1-208ENST00000436638 ASB8Q9H765 288 aa6.07□□□□□ -1.44
ECHDC1-208ENST00000436638 WDR26Q9H7D7 661 aa6.07□□□□□ -1.44
ECHDC1-208ENST00000436638 MRM3Q9HC36 420 aaKnown RBP6.07□□□□□ -1.44
ECHDC1-208ENST00000436638 TM9SF3Q9HD45 589 aa6.07□□□□□ -1.44
ECHDC1-208ENST00000436638 SAYSD1Q9NPB0 183 aa6.07□□□□□ -1.44
ECHDC1-208ENST00000436638 NLE1Q9NVX2 485 aaPredicted RBP6.07□□□□□ -1.44
ECHDC1-208ENST00000436638 SYBUQ9NX95 663 aa6.07□□□□□ -1.44
ECHDC1-208ENST00000436638 MBD2Q9UBB5 411 aa6.07□□□□□ -1.44
ECHDC1-208ENST00000436638 CRLS1Q9UJA2 301 aa6.07□□□□□ -1.44
ECHDC1-208ENST00000436638 MOSPD1Q9UJG1 213 aa6.07□□□□□ -1.44
ECHDC1-208ENST00000436638 TCAF1Q9Y4C2 921 aa6.07□□□□□ -1.44
ECHDC1-208ENST00000436638 KCTD3Q9Y597 815 aa6.07□□□□□ -1.44
ECHDC1-208ENST00000436638 PCDHB14Q9Y5E9 798 aa6.07□□□□□ -1.44
ECHDC1-208ENST00000436638 GMEB1Q9Y692 573 aa6.07□□□□□ -1.44
ECHDC1-208ENST00000436638 AP1M2Q9Y6Q5 423 aa6.07□□□□□ -1.44
ECHDC1-208ENST00000436638 CACNA1IQ9P0X4 2223 aa6.06□□□□□ -1.44
ECHDC1-208ENST00000436638 FAM237BA0A1B0GVD1 139 aa6.06□□□□□ -1.44
ECHDC1-208ENST00000436638 F8W8V4 182 aa6.06□□□□□ -1.44
ECHDC1-208ENST00000436638 STX16-NPEPL1H3BU86 382 aa6.06□□□□□ -1.44
ECHDC1-208ENST00000436638 TLR4O00206 839 aa6.06□□□□□ -1.44
ECHDC1-208ENST00000436638 PSMD9O00233 223 aa6.06□□□□□ -1.44
ECHDC1-208ENST00000436638 E2F3O00716 465 aa6.06□□□□□ -1.44
ECHDC1-208ENST00000436638 VILLO15195 856 aa6.06□□□□□ -1.44
ECHDC1-208ENST00000436638 LDB2O43679 373 aa6.06□□□□□ -1.44
ECHDC1-208ENST00000436638 AVILO75366 819 aa6.06□□□□□ -1.44
ECHDC1-208ENST00000436638 SRP72O76094 671 aaKnown RBP6.06□□□□□ -1.44
ECHDC1-208ENST00000436638 OR5F1O95221 314 aa6.06□□□□□ -1.44
ECHDC1-208ENST00000436638 SLC25A14O95258 325 aaPredicted RBP6.06□□□□□ -1.44
ECHDC1-208ENST00000436638 TRIM16O95361 564 aa6.06□□□□□ -1.44
ECHDC1-208ENST00000436638 PRAMEF1O95521 474 aa6.06□□□□□ -1.44
ECHDC1-208ENST00000436638 TTC4O95801 387 aa6.06□□□□□ -1.44
ECHDC1-208ENST00000436638 ECDO95905 644 aaPredicted RBP6.06□□□□□ -1.44
ECHDC1-208ENST00000436638 S100A9P06702 114 aaKnown RBP6.06□□□□□ -1.44
ECHDC1-208ENST00000436638 POLBP06746 335 aa6.06□□□□□ -1.44
ECHDC1-208ENST00000436638 RALBP11234 206 aa6.06□□□□□ -1.44
ECHDC1-208ENST00000436638 HPGDP15428 266 aa6.06□□□□□ -1.44
ECHDC1-208ENST00000436638 PGAM1P18669 254 aa6.06□□□□□ -1.44
ECHDC1-208ENST00000436638 MSH3P20585 1137 aa6.06□□□□□ -1.44
ECHDC1-208ENST00000436638 CDH3P22223 829 aa6.06□□□□□ -1.44
ECHDC1-208ENST00000436638 TEAD1P28347 426 aa6.06□□□□□ -1.44
ECHDC1-208ENST00000436638 MC4RP32245 332 aa6.06□□□□□ -1.44
ECHDC1-208ENST00000436638 KIR3DL1P43629 444 aa6.06□□□□□ -1.44
ECHDC1-208ENST00000436638 CSNK1EP49674 416 aaKnown RBP6.06□□□□□ -1.44
ECHDC1-208ENST00000436638 ZNF140P52738 457 aaPredicted RBP6.06□□□□□ -1.44
ECHDC1-208ENST00000436638 RPP38P78345 283 aaKnown RBP6.06□□□□□ -1.44
ECHDC1-208ENST00000436638 CRADDP78560 199 aa6.06□□□□□ -1.44
ECHDC1-208ENST00000436638 CACNG1Q06432 222 aa6.06□□□□□ -1.44
ECHDC1-208ENST00000436638 DPTQ07507 201 aa6.06□□□□□ -1.44
ECHDC1-208ENST00000436638 GNA13Q14344 377 aa6.06□□□□□ -1.44
ECHDC1-208ENST00000436638 GBX1Q14549 363 aa6.06□□□□□ -1.44
ECHDC1-208ENST00000436638 PTPRCAPQ14761 206 aa6.06□□□□□ -1.44
ECHDC1-208ENST00000436638 CHRNA6Q15825 494 aa6.06□□□□□ -1.44
ECHDC1-208ENST00000436638 GPR33Q49SQ1 333 aa6.06□□□□□ -1.44
ECHDC1-208ENST00000436638 FASTKD1Q53R41 847 aaKnown RBP6.06□□□□□ -1.44
ECHDC1-208ENST00000436638 TRIM61Q5EBN2 209 aa6.06□□□□□ -1.44
ECHDC1-208ENST00000436638 SPANXN3Q5MJ09 141 aa6.06□□□□□ -1.44
ECHDC1-208ENST00000436638 LDLRAP1Q5SW96 308 aa6.06□□□□□ -1.44
ECHDC1-208ENST00000436638 FNBP1LQ5T0N5 605 aa6.06□□□□□ -1.44
ECHDC1-208ENST00000436638 NDUFAF5Q5TEU4 345 aa6.06□□□□□ -1.44
ECHDC1-208ENST00000436638 ARHGAP11AQ6P4F7 1023 aa6.06□□□□□ -1.44
ECHDC1-208ENST00000436638 SHQ1Q6PI26 577 aaKnown RBP6.06□□□□□ -1.44
ECHDC1-208ENST00000436638 AFTPHQ6ULP2 937 aa6.06□□□□□ -1.44
ECHDC1-208ENST00000436638 IL27RAQ6UWB1 636 aa6.06□□□□□ -1.44
ECHDC1-208ENST00000436638 ENPP7Q6UWV6 458 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms