RNA–Protein interactions for RNA: ENST00000435706.6

TOP2B-204, Transcript of DNA topoisomerase II beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TOP2B, Length 5,389 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2B-204ENST00000435706 SLC10A6Q3KNW5 377 aa22■■□□□ 1.11
TOP2B-204ENST00000435706 CIR1Q86X95 450 aaPredicted RBP22■■□□□ 1.11
TOP2B-204ENST00000435706 OR13C4Q8NGS5 318 aa22■■□□□ 1.11
TOP2B-204ENST00000435706 RNF31Q96EP0 1072 aa22■■□□□ 1.11
TOP2B-204ENST00000435706 NECTIN3Q9NQS3 549 aa22■■□□□ 1.11
TOP2B-204ENST00000435706 FZD4Q9ULV1 537 aa22■■□□□ 1.11
TOP2B-204ENST00000435706 PSAT1Q9Y617 370 aa22■■□□□ 1.11
TOP2B-204ENST00000435706 RPS3AP61247 264 aaKnown RBP22■■□□□ 1.11
TOP2B-204ENST00000435706 RPL6Q02878 288 aaKnown RBP22■■□□□ 1.11
TOP2B-204ENST00000435706 ZNF181Q2M3W8 571 aa22■■□□□ 1.11
TOP2B-204ENST00000435706 KIAA1614Q5VZ46 1190 aa22■■□□□ 1.11
TOP2B-204ENST00000435706 DNASE1L2Q92874 299 aa22■■□□□ 1.11
TOP2B-204ENST00000435706 POLR3BQ9NW08 1133 aaPredicted RBP22■■□□□ 1.11
TOP2B-204ENST00000435706 HOXD13P35453 343 aa22■■□□□ 1.11
TOP2B-204ENST00000435706 ADAM15Q13444 863 aa22■■□□□ 1.11
TOP2B-204ENST00000435706 ANKDD1AQ495B1 522 aa22■■□□□ 1.11
TOP2B-204ENST00000435706 ZC3H3Q8IXZ2 948 aaKnown RBP22■■□□□ 1.11
TOP2B-204ENST00000435706 HERC2P3Q9BVR0 1158 aa22■■□□□ 1.11
TOP2B-204ENST00000435706 OR51V1Q9H2C8 321 aa22■■□□□ 1.11
TOP2B-204ENST00000435706 PCDHGA11Q9Y5H2 935 aa22■■□□□ 1.11
TOP2B-204ENST00000435706 PDCD5O14737 125 aa22■■□□□ 1.11
TOP2B-204ENST00000435706 CASP9P55211 416 aa22■■□□□ 1.11
TOP2B-204ENST00000435706 PRAMEF19Q5SWL8 479 aa22■■□□□ 1.11
TOP2B-204ENST00000435706 SLC30A8Q8IWU4 369 aa22■■□□□ 1.11
TOP2B-204ENST00000435706 PLCL2Q9UPR0 1127 aa22■■□□□ 1.11
TOP2B-204ENST00000435706 H0YJX3 145 aa21.99■■□□□ 1.11
TOP2B-204ENST00000435706 TEX28O15482 410 aa21.99■■□□□ 1.11
TOP2B-204ENST00000435706 SCN2BO60939 215 aa21.99■■□□□ 1.11
TOP2B-204ENST00000435706 HLA-DQB2P05538 268 aa21.99■■□□□ 1.11
TOP2B-204ENST00000435706 MAGEA2P43356 314 aa21.99■■□□□ 1.11
TOP2B-204ENST00000435706 TXNL4AP83876 142 aaKnown RBP21.99■■□□□ 1.11
TOP2B-204ENST00000435706 PLD6Q8N2A8 252 aaKnown RBP21.99■■□□□ 1.11
TOP2B-204ENST00000435706 ZC3H10Q96K80 434 aaKnown RBP21.99■■□□□ 1.11
TOP2B-204ENST00000435706 TBC1D14Q9P2M4 693 aa21.99■■□□□ 1.11
TOP2B-204ENST00000435706 DPP7Q9UHL4 492 aa21.99■■□□□ 1.11
TOP2B-204ENST00000435706 MAU2Q9Y6X3 613 aa21.99■■□□□ 1.11
TOP2B-204ENST00000435706 TRIM3O75382 744 aaPredicted RBP21.99■■□□□ 1.11
TOP2B-204ENST00000435706 CPN2P22792 545 aa21.99■■□□□ 1.11
TOP2B-204ENST00000435706 DNAJB7Q7Z6W7 309 aaPredicted RBP21.99■■□□□ 1.11
TOP2B-204ENST00000435706 SLC45A3Q96JT2 553 aa21.99■■□□□ 1.11
TOP2B-204ENST00000435706 FBXL18Q96ME1 805 aa21.99■■□□□ 1.11
TOP2B-204ENST00000435706 LPIN3Q9BQK8 851 aa21.99■■□□□ 1.11
TOP2B-204ENST00000435706 RBM47A0AV96 593 aaKnown RBP21.99■■□□□ 1.11
TOP2B-204ENST00000435706 MAGEB3O15480 346 aa21.99■■□□□ 1.11
TOP2B-204ENST00000435706 CORO1AP31146 461 aaKnown RBP21.99■■□□□ 1.11
TOP2B-204ENST00000435706 CRB2Q5IJ48 1285 aa21.99■■□□□ 1.11
TOP2B-204ENST00000435706 XKRXQ6PP77 449 aa21.99■■□□□ 1.11
TOP2B-204ENST00000435706 RPS27LQ71UM5 84 aaKnown RBP21.99■■□□□ 1.11
TOP2B-204ENST00000435706 CHST4Q8NCG5 386 aa21.99■■□□□ 1.11
TOP2B-204ENST00000435706 CEP76Q8TAP6 659 aa21.99■■□□□ 1.11
TOP2B-204ENST00000435706 ITM2CQ9NQX7 267 aa21.99■■□□□ 1.11
TOP2B-204ENST00000435706 FLRT1Q9NZU1 646 aa21.99■■□□□ 1.11
TOP2B-204ENST00000435706 GALPQ9UBC7 116 aa21.99■■□□□ 1.11
TOP2B-204ENST00000435706 PHF24Q9UPV7 400 aa21.99■■□□□ 1.11
TOP2B-204ENST00000435706 SERPINA3P01011 423 aa21.99■■□□□ 1.11
TOP2B-204ENST00000435706 EPHX2P34913 555 aa21.99■■□□□ 1.11
TOP2B-204ENST00000435706 ALG11Q2TAA5 492 aa21.99■■□□□ 1.11
TOP2B-204ENST00000435706 CLEC4DQ8WXI8 215 aa21.99■■□□□ 1.11
TOP2B-204ENST00000435706 SOX17Q9H6I2 414 aaPredicted RBP21.99■■□□□ 1.11
TOP2B-204ENST00000435706 CCM2LQ9NUG4 571 aaPredicted RBP21.99■■□□□ 1.11
TOP2B-204ENST00000435706 THUMPD1Q9NXG2 353 aaKnown RBP21.99■■□□□ 1.11
TOP2B-204ENST00000435706 STOX2Q9P2F5 926 aaPredicted RBP21.99■■□□□ 1.11
TOP2B-204ENST00000435706 SLC2A6Q9UGQ3 507 aa21.99■■□□□ 1.11
TOP2B-204ENST00000435706 DNAJB5O75953 348 aa21.98■■□□□ 1.11
TOP2B-204ENST00000435706 RABGGTBP53611 331 aa21.98■■□□□ 1.11
TOP2B-204ENST00000435706 SCML4Q8N228 414 aa21.98■■□□□ 1.11
TOP2B-204ENST00000435706 OR2B2Q9GZK3 357 aa21.98■■□□□ 1.11
TOP2B-204ENST00000435706 FBRSL1Q9HCM7 1045 aaKnown RBP21.98■■□□□ 1.11
TOP2B-204ENST00000435706 ANXA2P2A6NMY6 339 aa21.98■■□□□ 1.11
TOP2B-204ENST00000435706 ANXA2P07355 339 aaKnown RBP21.98■■□□□ 1.11
TOP2B-204ENST00000435706 C7P10643 843 aa21.98■■□□□ 1.11
TOP2B-204ENST00000435706 SLC9A3P48764 834 aa21.98■■□□□ 1.11
TOP2B-204ENST00000435706 LILRA4P59901 499 aa21.98■■□□□ 1.11
TOP2B-204ENST00000435706 CDHR3Q6ZTQ4 885 aa21.98■■□□□ 1.11
TOP2B-204ENST00000435706 PIM3Q86V86 326 aa21.98■■□□□ 1.11
TOP2B-204ENST00000435706 MAPKAP1Q9BPZ7 522 aa21.98■■□□□ 1.11
TOP2B-204ENST00000435706 CALML5Q9NZT1 146 aa21.98■■□□□ 1.11
TOP2B-204ENST00000435706 OR2AG2A6NM03 316 aa21.98■■□□□ 1.11
TOP2B-204ENST00000435706 OAS1P00973 400 aaKnown RBP21.98■■□□□ 1.11
TOP2B-204ENST00000435706 OPN1SWP03999 348 aa21.98■■□□□ 1.11
TOP2B-204ENST00000435706 CTC1Q2NKJ3 1217 aa21.98■■□□□ 1.11
TOP2B-204ENST00000435706 KIAA1161Q6NSJ0 714 aa21.98■■□□□ 1.11
TOP2B-204ENST00000435706 TNFAIP8L2Q6P589 184 aaPredicted RBP21.98■■□□□ 1.11
TOP2B-204ENST00000435706 SPPL2BQ8TCT7 592 aa21.98■■□□□ 1.11
TOP2B-204ENST00000435706 MTERF1Q99551 399 aaKnown RBP21.98■■□□□ 1.11
TOP2B-204ENST00000435706 ANKRD26Q9UPS8 1709 aa21.98■■□□□ 1.11
TOP2B-204ENST00000435706 C1QTNF3-AMACRE9PGA6 284 aa21.98■■□□□ 1.11
TOP2B-204ENST00000435706 DLGAP1O14490 977 aa21.98■■□□□ 1.11
TOP2B-204ENST00000435706 AKAP8O43823 692 aaKnown RBP21.98■■□□□ 1.11
TOP2B-204ENST00000435706 XYLBO75191 536 aa21.98■■□□□ 1.11
TOP2B-204ENST00000435706 RPS3P23396 243 aaKnown RBP eCLIP21.98■■□□□ 1.112e-6■■■■■ 33.2
TOP2B-204ENST00000435706 CEACAM7Q14002 265 aa21.98■■□□□ 1.11
TOP2B-204ENST00000435706 TCEAL5Q5H9L2 206 aa21.98■■□□□ 1.11
TOP2B-204ENST00000435706 FAM91A1Q658Y4 838 aa21.98■■□□□ 1.11
TOP2B-204ENST00000435706 OR4F3Q6IEY1 312 aa21.98■■□□□ 1.11
TOP2B-204ENST00000435706 OXR1Q8N573 874 aa21.98■■□□□ 1.11
TOP2B-204ENST00000435706 OR4C6Q8NH72 309 aa21.98■■□□□ 1.11
TOP2B-204ENST00000435706 SOCS4Q8WXH5 440 aa21.98■■□□□ 1.11
TOP2B-204ENST00000435706 DDX1Q92499 740 aaKnown RBP21.98■■□□□ 1.11
TOP2B-204ENST00000435706 WACQ9BTA9 647 aa21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms