RNA–Protein interactions for RNA: ENST00000435252.1

GTF3C3-204, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 527 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-204ENST00000435252 FAM135AQ9P2D6 1515 aa4.3□□□□□ -1.72
GTF3C3-204ENST00000435252 RTEL1-TNFRSF6BF6WH68 1400 aa4.29□□□□□ -1.72
GTF3C3-204ENST00000435252 MSH6P52701 1360 aa4.29□□□□□ -1.72
GTF3C3-204ENST00000435252 SHPRHQ149N8 1683 aa4.29□□□□□ -1.72
GTF3C3-204ENST00000435252 CAMTA1Q9Y6Y1 1673 aa4.29□□□□□ -1.72
GTF3C3-204ENST00000435252 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.29□□□□□ -1.72
GTF3C3-204ENST00000435252 HEPACAM2A8MVW5 462 aa4.29□□□□□ -1.72
GTF3C3-204ENST00000435252 HHLA1C9JL84 531 aa4.29□□□□□ -1.72
GTF3C3-204ENST00000435252 PLOD2O00469 737 aa4.29□□□□□ -1.72
GTF3C3-204ENST00000435252 SH2B2O14492 632 aaPredicted RBP4.29□□□□□ -1.72
GTF3C3-204ENST00000435252 MEIS2O14770 477 aa4.29□□□□□ -1.72
GTF3C3-204ENST00000435252 EML2O95834 649 aa4.29□□□□□ -1.72
GTF3C3-204ENST00000435252 TRUB2O95900 331 aaKnown RBP4.29□□□□□ -1.72
GTF3C3-204ENST00000435252 AMBPP02760 352 aa4.29□□□□□ -1.72
GTF3C3-204ENST00000435252 LINGO3P0C6S8 592 aa4.29□□□□□ -1.72
GTF3C3-204ENST00000435252 CAPZA2P47755 286 aa4.29□□□□□ -1.72
GTF3C3-204ENST00000435252 GPR17Q13304 367 aa4.29□□□□□ -1.72
GTF3C3-204ENST00000435252 TMEM30BQ3MIR4 351 aa4.29□□□□□ -1.72
GTF3C3-204ENST00000435252 GTDC1Q4AE62 458 aa4.29□□□□□ -1.72
GTF3C3-204ENST00000435252 CEP85LQ5SZL2 805 aa4.29□□□□□ -1.72
GTF3C3-204ENST00000435252 NAA16Q6N069 864 aaPredicted RBP4.29□□□□□ -1.72
GTF3C3-204ENST00000435252 ARHGAP11AQ6P4F7 1023 aa4.29□□□□□ -1.72
GTF3C3-204ENST00000435252 ZNF449Q6P9G9 518 aa4.29□□□□□ -1.72
GTF3C3-204ENST00000435252 APLFQ8IW19 511 aaPredicted RBP4.29□□□□□ -1.72
GTF3C3-204ENST00000435252 OR5M8Q8NGP6 311 aa4.29□□□□□ -1.72
GTF3C3-204ENST00000435252 HSD17B8Q92506 261 aa4.29□□□□□ -1.72
GTF3C3-204ENST00000435252 GIMAP5Q96F15 307 aa4.29□□□□□ -1.72
GTF3C3-204ENST00000435252 ARRDC1-AS1Q9H2J1 176 aa4.29□□□□□ -1.72
GTF3C3-204ENST00000435252 ZNF696Q9H7X3 374 aa4.29□□□□□ -1.72
GTF3C3-204ENST00000435252 ANKZF1Q9H8Y5 726 aa4.29□□□□□ -1.72
GTF3C3-204ENST00000435252 TBC1D17Q9HA65 648 aa4.29□□□□□ -1.72
GTF3C3-204ENST00000435252 SIX2Q9NPC8 291 aa4.29□□□□□ -1.72
GTF3C3-204ENST00000435252 GKN1Q9NS71 199 aa4.29□□□□□ -1.72
GTF3C3-204ENST00000435252 DDX43Q9NXZ2 648 aaKnown RBP4.29□□□□□ -1.72
GTF3C3-204ENST00000435252 CRNNQ9UBG3 495 aaPredicted RBP4.29□□□□□ -1.72
GTF3C3-204ENST00000435252 SLC24A2Q9UI40 661 aa4.29□□□□□ -1.72
GTF3C3-204ENST00000435252 ANAPC2Q9UJX6 822 aa4.29□□□□□ -1.72
GTF3C3-204ENST00000435252 TRPV2Q9Y5S1 764 aa4.29□□□□□ -1.72
GTF3C3-204ENST00000435252 SCAF11Q99590 1463 aaKnown RBP4.29□□□□□ -1.72
GTF3C3-204ENST00000435252 UGGT1Q9NYU2 1555 aa4.28□□□□□ -1.72
GTF3C3-204ENST00000435252 STK36Q9NRP7 1315 aa4.28□□□□□ -1.72
GTF3C3-204ENST00000435252 DNM1LO00429 736 aa4.28□□□□□ -1.72
GTF3C3-204ENST00000435252 ATP6V0E1O15342 81 aa4.28□□□□□ -1.72
GTF3C3-204ENST00000435252 ADAM20O43506 726 aa4.28□□□□□ -1.72
GTF3C3-204ENST00000435252 HSP90AA1P07900 732 aaKnown RBP4.28□□□□□ -1.72
GTF3C3-204ENST00000435252 PATE4P0C8F1 98 aa4.28□□□□□ -1.72
GTF3C3-204ENST00000435252 EFNA1P20827 205 aaPredicted RBP4.28□□□□□ -1.72
GTF3C3-204ENST00000435252 CA6P23280 308 aa4.28□□□□□ -1.72
GTF3C3-204ENST00000435252 EEF1B2P24534 225 aaKnown RBP4.28□□□□□ -1.72
GTF3C3-204ENST00000435252 DNASE1P24855 282 aa4.28□□□□□ -1.72
GTF3C3-204ENST00000435252 CEACAM8P31997 349 aaPredicted RBP4.28□□□□□ -1.72
GTF3C3-204ENST00000435252 NR0B1P51843 470 aaKnown RBP4.28□□□□□ -1.72
GTF3C3-204ENST00000435252 ATP12AP54707 1039 aa4.28□□□□□ -1.72
GTF3C3-204ENST00000435252 CDH13P55290 713 aa4.28□□□□□ -1.72
GTF3C3-204ENST00000435252 TPD52P55327 224 aaPredicted RBP4.28□□□□□ -1.72
GTF3C3-204ENST00000435252 HERV-K104P61576 105 aa4.28□□□□□ -1.72
GTF3C3-204ENST00000435252 SNTB1Q13884 538 aaKnown RBP4.28□□□□□ -1.72
GTF3C3-204ENST00000435252 BECN1Q14457 450 aa4.28□□□□□ -1.72
GTF3C3-204ENST00000435252 RRS1Q15050 365 aaKnown RBP4.28□□□□□ -1.72
GTF3C3-204ENST00000435252 TMEM266Q2M3C6 531 aa4.28□□□□□ -1.72
GTF3C3-204ENST00000435252 RNASEH2BQ5TBB1 312 aaKnown RBP4.28□□□□□ -1.72
GTF3C3-204ENST00000435252 CLEC4GQ6UXB4 293 aa4.28□□□□□ -1.72
GTF3C3-204ENST00000435252 C15orf39Q6ZRI6 1047 aa4.28□□□□□ -1.72
GTF3C3-204ENST00000435252 NUDT13Q86X67 352 aa4.28□□□□□ -1.72
GTF3C3-204ENST00000435252 CFAP61Q8NHU2 1237 aa4.28□□□□□ -1.72
GTF3C3-204ENST00000435252 HCAR2Q8TDS4 363 aa4.28□□□□□ -1.72
GTF3C3-204ENST00000435252 SPDL1Q96EA4 605 aa4.28□□□□□ -1.72
GTF3C3-204ENST00000435252 LRR1Q96L50 414 aa4.28□□□□□ -1.72
GTF3C3-204ENST00000435252 SLF1Q9BQI6 1058 aa4.28□□□□□ -1.72
GTF3C3-204ENST00000435252 MDFICQ9P1T7 246 aa4.28□□□□□ -1.72
GTF3C3-204ENST00000435252 ZHX1Q9UKY1 873 aaPredicted RBP4.28□□□□□ -1.72
GTF3C3-204ENST00000435252 NINLQ9Y2I6 1382 aa4.27□□□□□ -1.73
GTF3C3-204ENST00000435252 MAP3K1Q13233 1512 aa4.27□□□□□ -1.73
GTF3C3-204ENST00000435252 MLH3Q9UHC1 1453 aa4.27□□□□□ -1.73
GTF3C3-204ENST00000435252 IGLV9-49A0A0B4J1Y8 123 aa4.27□□□□□ -1.73
GTF3C3-204ENST00000435252 IGHV4-61A0A0C4DH41 118 aa4.27□□□□□ -1.73
GTF3C3-204ENST00000435252 TRBC2A0A5B9 178 aa4.27□□□□□ -1.73
GTF3C3-204ENST00000435252 IGHV4-59P01825 116 aa4.27□□□□□ -1.73
GTF3C3-204ENST00000435252 CFC1BP0CG36 223 aa4.27□□□□□ -1.73
GTF3C3-204ENST00000435252 CFC1P0CG37 223 aa4.27□□□□□ -1.73
GTF3C3-204ENST00000435252 AKR1B1P15121 316 aa4.27□□□□□ -1.73
GTF3C3-204ENST00000435252 RAD52P43351 418 aa4.27□□□□□ -1.73
GTF3C3-204ENST00000435252 CRIP2P52943 208 aaPredicted RBP4.27□□□□□ -1.73
GTF3C3-204ENST00000435252 CSE1LP55060 971 aaKnown RBP4.27□□□□□ -1.73
GTF3C3-204ENST00000435252 IFI35P80217 286 aaPredicted RBP4.27□□□□□ -1.73
GTF3C3-204ENST00000435252 ITGA9Q13797 1035 aa4.27□□□□□ -1.73
GTF3C3-204ENST00000435252 MRGPRG-AS1Q2M3A8 158 aa4.27□□□□□ -1.73
GTF3C3-204ENST00000435252 C11orf63Q6NUN7 778 aa4.27□□□□□ -1.73
GTF3C3-204ENST00000435252 ZNF790Q6PG37 636 aa4.27□□□□□ -1.73
GTF3C3-204ENST00000435252 KRT74Q7RTS7 529 aa4.27□□□□□ -1.73
GTF3C3-204ENST00000435252 CAMKMTQ7Z624 323 aa4.27□□□□□ -1.73
GTF3C3-204ENST00000435252 ZNF383Q8NA42 475 aa4.27□□□□□ -1.73
GTF3C3-204ENST00000435252 ZFAND2BQ8WV99 257 aa4.27□□□□□ -1.73
GTF3C3-204ENST00000435252 IRGQQ8WZA9 623 aa4.27□□□□□ -1.73
GTF3C3-204ENST00000435252 SUSD6Q92537 303 aa4.27□□□□□ -1.73
GTF3C3-204ENST00000435252 NXNL1Q96CM4 212 aa4.27□□□□□ -1.73
GTF3C3-204ENST00000435252 ARSGQ96EG1 525 aa4.27□□□□□ -1.73
GTF3C3-204ENST00000435252 ASCL2Q99929 193 aa4.27□□□□□ -1.73
GTF3C3-204ENST00000435252 FGF21Q9NSA1 209 aa4.27□□□□□ -1.73
GTF3C3-204ENST00000435252 MYH14Q7Z406 1995 aaKnown RBP4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms