RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 I6L893 689 aaPredicted RBP7.3□□□□□ -1.24
CPSF6-202ENST00000435070 SLC16A6O15403 523 aa7.3□□□□□ -1.24
CPSF6-202ENST00000435070 OR4F21O95013 312 aa7.3□□□□□ -1.24
CPSF6-202ENST00000435070 SNX4O95219 450 aa7.3□□□□□ -1.24
CPSF6-202ENST00000435070 PAPSS2O95340 614 aaPredicted RBP7.3□□□□□ -1.24
CPSF6-202ENST00000435070 ERP29P30040 261 aaKnown RBP7.3□□□□□ -1.24
CPSF6-202ENST00000435070 PIK3CBP42338 1070 aa7.3□□□□□ -1.24
CPSF6-202ENST00000435070 RPP38P78345 283 aaKnown RBP7.3□□□□□ -1.24
CPSF6-202ENST00000435070 C5orf22Q49AR2 442 aa7.3□□□□□ -1.24
CPSF6-202ENST00000435070 CACHD1Q5VU97 1274 aa7.3□□□□□ -1.24
CPSF6-202ENST00000435070 FAM122CQ6P4D5 195 aa7.3□□□□□ -1.24
CPSF6-202ENST00000435070 PGBD5Q8N414 524 aa7.3□□□□□ -1.24
CPSF6-202ENST00000435070 ZFAND1Q8TCF1 268 aa7.3□□□□□ -1.24
CPSF6-202ENST00000435070 ZNF675Q8TD23 568 aa7.3□□□□□ -1.24
CPSF6-202ENST00000435070 NETO1Q8TDF5 533 aa7.3□□□□□ -1.24
CPSF6-202ENST00000435070 EDEM1Q92611 657 aa7.3□□□□□ -1.24
CPSF6-202ENST00000435070 RIT1Q92963 219 aa7.3□□□□□ -1.24
CPSF6-202ENST00000435070 NPAP1Q9NZP6 1156 aa7.3□□□□□ -1.24
CPSF6-202ENST00000435070 LOXHD1Q8IVV2 1947 aa7.3□□□□□ -1.24
CPSF6-202ENST00000435070 PTHP01270 115 aa7.3□□□□□ -1.24
CPSF6-202ENST00000435070 IQCF3P0C7M6 154 aa7.3□□□□□ -1.24
CPSF6-202ENST00000435070 NNMTP40261 264 aa7.3□□□□□ -1.24
CPSF6-202ENST00000435070 RBP5P82980 135 aa7.3□□□□□ -1.24
CPSF6-202ENST00000435070 CACNB2Q08289 660 aaPredicted RBP7.3□□□□□ -1.24
CPSF6-202ENST00000435070 FADDQ13158 208 aa7.3□□□□□ -1.24
CPSF6-202ENST00000435070 PTGR1Q14914 329 aa7.3□□□□□ -1.24
CPSF6-202ENST00000435070 FAM131AQ6UXB0 335 aa7.3□□□□□ -1.24
CPSF6-202ENST00000435070 ABI3BPQ7Z7G0 1075 aa7.3□□□□□ -1.24
CPSF6-202ENST00000435070 ANKRD46Q86W74 232 aa7.3□□□□□ -1.24
CPSF6-202ENST00000435070 FBXO39Q8N4B4 442 aa7.3□□□□□ -1.24
CPSF6-202ENST00000435070 CENPIQ92674 756 aaPredicted RBP7.3□□□□□ -1.24
CPSF6-202ENST00000435070 C18orf25Q96B23 403 aaPredicted RBP7.3□□□□□ -1.24
CPSF6-202ENST00000435070 AKT1S1Q96B36 256 aa7.3□□□□□ -1.24
CPSF6-202ENST00000435070 SIPA1Q96FS4 1042 aa7.3□□□□□ -1.24
CPSF6-202ENST00000435070 CAMKK2Q96RR4 588 aa7.3□□□□□ -1.24
CPSF6-202ENST00000435070 ZNF490Q9ULM2 529 aaPredicted RBP7.3□□□□□ -1.24
CPSF6-202ENST00000435070 RPH3AQ9Y2J0 694 aaPredicted RBP7.3□□□□□ -1.24
CPSF6-202ENST00000435070 POLR3HQ9Y535 204 aaPredicted RBP7.3□□□□□ -1.24
CPSF6-202ENST00000435070 PCDHB5Q9Y5E4 795 aa7.3□□□□□ -1.24
CPSF6-202ENST00000435070 TRIM77I1YAP6 450 aa7.29□□□□□ -1.24
CPSF6-202ENST00000435070 SERPIND1P05546 499 aa7.29□□□□□ -1.24
CPSF6-202ENST00000435070 PIRTP0C851 137 aa7.29□□□□□ -1.24
CPSF6-202ENST00000435070 ADRA1BP35368 520 aa7.29□□□□□ -1.24
CPSF6-202ENST00000435070 SLC19A1P41440 591 aa7.29□□□□□ -1.24
CPSF6-202ENST00000435070 ARL4DP49703 201 aa7.29□□□□□ -1.24
CPSF6-202ENST00000435070 AP2S1P53680 142 aaPredicted RBP7.29□□□□□ -1.24
CPSF6-202ENST00000435070 MAXP61244 160 aa7.29□□□□□ -1.24
CPSF6-202ENST00000435070 PAFAH1B3Q15102 231 aaKnown RBP7.29□□□□□ -1.24
CPSF6-202ENST00000435070 TRIM71Q2Q1W2 868 aaKnown RBP7.29□□□□□ -1.24
CPSF6-202ENST00000435070 SLC25A52Q3SY17 297 aa7.29□□□□□ -1.24
CPSF6-202ENST00000435070 ZNF484Q5JVG2 852 aa7.29□□□□□ -1.24
CPSF6-202ENST00000435070 C6orf136Q5SQH8 315 aa7.29□□□□□ -1.24
CPSF6-202ENST00000435070 MFSD14CQ5VZR4 134 aa7.29□□□□□ -1.24
CPSF6-202ENST00000435070 PM20D1Q6GTS8 502 aa7.29□□□□□ -1.24
CPSF6-202ENST00000435070 KLHL17Q6TDP4 642 aa7.29□□□□□ -1.24
CPSF6-202ENST00000435070 CCDC71Q8IV32 467 aaPredicted RBP7.29□□□□□ -1.24
CPSF6-202ENST00000435070 UTP15Q8TED0 518 aaKnown RBP7.29□□□□□ -1.24
CPSF6-202ENST00000435070 C11orf54Q9H0W9 315 aaPredicted RBP7.29□□□□□ -1.24
CPSF6-202ENST00000435070 FAM83DQ9H4H8 585 aa7.29□□□□□ -1.24
CPSF6-202ENST00000435070 ANKHQ9HCJ1 492 aa7.29□□□□□ -1.24
CPSF6-202ENST00000435070 DDIT4Q9NX09 232 aa7.29□□□□□ -1.24
CPSF6-202ENST00000435070 TRMT6Q9UJA5 497 aaKnown RBP7.29□□□□□ -1.24
CPSF6-202ENST00000435070 SNX7Q9UNH6 387 aa7.29□□□□□ -1.24
CPSF6-202ENST00000435070 ABCG2Q9UNQ0 655 aa7.29□□□□□ -1.24
CPSF6-202ENST00000435070 A0A0B4J293 547 aa7.29□□□□□ -1.24
CPSF6-202ENST00000435070 ANKRD28O15084 1053 aa7.29□□□□□ -1.24
CPSF6-202ENST00000435070 IRF1P10914 325 aa7.29□□□□□ -1.24
CPSF6-202ENST00000435070 GZMKP49863 264 aa7.29□□□□□ -1.24
CPSF6-202ENST00000435070 HTR6P50406 440 aa7.29□□□□□ -1.24
CPSF6-202ENST00000435070 ARSDP51689 593 aa7.29□□□□□ -1.24
CPSF6-202ENST00000435070 GALNT3Q14435 633 aa7.29□□□□□ -1.24
CPSF6-202ENST00000435070 TSTQ16762 297 aaKnown RBP7.29□□□□□ -1.24
CPSF6-202ENST00000435070 RAET1EQ8TD07 263 aa7.29□□□□□ -1.24
CPSF6-202ENST00000435070 ST8SIA2Q92186 375 aa7.29□□□□□ -1.24
CPSF6-202ENST00000435070 RNF31Q96EP0 1072 aa7.29□□□□□ -1.24
CPSF6-202ENST00000435070 TSPAN17Q96FV3 270 aa7.29□□□□□ -1.24
CPSF6-202ENST00000435070 PSKH2Q96QS6 385 aa7.29□□□□□ -1.24
CPSF6-202ENST00000435070 TM9SF2Q99805 663 aa7.29□□□□□ -1.24
CPSF6-202ENST00000435070 PPIL3Q9H2H8 161 aaKnown RBP7.29□□□□□ -1.24
CPSF6-202ENST00000435070 IL1RAPQ9NPH3 570 aa7.29□□□□□ -1.24
CPSF6-202ENST00000435070 RNF181Q9P0P0 153 aa7.29□□□□□ -1.24
CPSF6-202ENST00000435070 SAMHD1Q9Y3Z3 626 aaKnown RBP7.29□□□□□ -1.24
CPSF6-202ENST00000435070 DOCK5Q9H7D0 1870 aa7.29□□□□□ -1.24
CPSF6-202ENST00000435070 ACKR2O00590 384 aa7.29□□□□□ -1.24
CPSF6-202ENST00000435070 EFCAB14O75071 495 aa7.29□□□□□ -1.24
CPSF6-202ENST00000435070 SERPINF2P08697 491 aa7.29□□□□□ -1.24
CPSF6-202ENST00000435070 CNPP09543 421 aaKnown RBP7.29□□□□□ -1.24
CPSF6-202ENST00000435070 ZFP36L2P47974 494 aaKnown RBP7.29□□□□□ -1.24
CPSF6-202ENST00000435070 SEMA3AQ14563 771 aa7.29□□□□□ -1.24
CPSF6-202ENST00000435070 RUNDC3AQ59EK9 446 aa7.29□□□□□ -1.24
CPSF6-202ENST00000435070 ANKS6Q68DC2 871 aa7.29□□□□□ -1.24
CPSF6-202ENST00000435070 PLET1Q6UQ28 207 aa7.29□□□□□ -1.24
CPSF6-202ENST00000435070 PODNQ7Z5L7 613 aa7.29□□□□□ -1.24
CPSF6-202ENST00000435070 PHF21AQ96BD5 680 aa7.29□□□□□ -1.24
CPSF6-202ENST00000435070 PDCD10Q9BUL8 212 aa7.29□□□□□ -1.24
CPSF6-202ENST00000435070 C1QTNF6Q9BXI9 259 aa7.29□□□□□ -1.24
CPSF6-202ENST00000435070 RNF112Q9ULX5 631 aa7.29□□□□□ -1.24
CPSF6-202ENST00000435070 AP3M1Q9Y2T2 418 aa7.29□□□□□ -1.24
CPSF6-202ENST00000435070 FAM234BA2RU67 622 aa7.29□□□□□ -1.24
CPSF6-202ENST00000435070 TSPAN1O60635 241 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms