RNA–Protein interactions for RNA: ENST00000433165.6

CNKSR3-202, Transcript of CNKSR family member 3, humanhuman

TSL 1 (best)

Gene CNKSR3, Length 2,347 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3-202ENST00000433165 MSANTD3Q96H12 275 aa7.54□□□□□ -1.2
CNKSR3-202ENST00000433165 MAP6Q96JE9 813 aa7.54□□□□□ -1.2
CNKSR3-202ENST00000433165 COQ7Q99807 217 aa7.54□□□□□ -1.2
CNKSR3-202ENST00000433165 GON7Q9BXV9 100 aa7.54□□□□□ -1.2
CNKSR3-202ENST00000433165 CXCL16Q9H2A7 254 aa7.54□□□□□ -1.2
CNKSR3-202ENST00000433165 KCNK12Q9HB15 430 aa7.54□□□□□ -1.2
CNKSR3-202ENST00000433165 ZFP14Q9HCL3 533 aa7.54□□□□□ -1.2
CNKSR3-202ENST00000433165 CYP4F12Q9HCS2 524 aa7.54□□□□□ -1.2
CNKSR3-202ENST00000433165 SLC2A4RGQ9NR83 387 aa7.54□□□□□ -1.2
CNKSR3-202ENST00000433165 FAM49BQ9NUQ9 324 aa7.54□□□□□ -1.2
CNKSR3-202ENST00000433165 KLHL8Q9P2G9 620 aaPredicted RBP7.54□□□□□ -1.2
CNKSR3-202ENST00000433165 ERVK-18Q9QC07 812 aa7.54□□□□□ -1.2
CNKSR3-202ENST00000433165 RABL2AQ9UBK7 228 aaPredicted RBP7.54□□□□□ -1.2
CNKSR3-202ENST00000433165 DNAJB9Q9UBS3 223 aa7.54□□□□□ -1.2
CNKSR3-202ENST00000433165 TPRKBQ9Y3C4 175 aa7.54□□□□□ -1.2
CNKSR3-202ENST00000433165 PCDHGB6Q9Y5F9 930 aa7.54□□□□□ -1.2
CNKSR3-202ENST00000433165 C2orf16Q68DN1 1984 aa7.54□□□□□ -1.2
CNKSR3-202ENST00000433165 SZT2Q5T011 3432 aa7.54□□□□□ -1.2
CNKSR3-202ENST00000433165 PRMT5O14744 637 aaPredicted RBP7.53□□□□□ -1.2
CNKSR3-202ENST00000433165 ECI2O75521 394 aa7.53□□□□□ -1.2
CNKSR3-202ENST00000433165 STAU1O95793 577 aaKnown RBP7.53□□□□□ -1.2
CNKSR3-202ENST00000433165 NPPAP01160 153 aa7.53□□□□□ -1.2
CNKSR3-202ENST00000433165 RBP1P09455 135 aa7.53□□□□□ -1.2
CNKSR3-202ENST00000433165 ITGAMP11215 1152 aa7.53□□□□□ -1.2
CNKSR3-202ENST00000433165 CYP2A7P20853 494 aa7.53□□□□□ -1.2
CNKSR3-202ENST00000433165 MAGP20916 626 aa7.53□□□□□ -1.2
CNKSR3-202ENST00000433165 DDX6P26196 483 aaKnown RBP eCLIP7.53□□□□□ -1.2
CNKSR3-202ENST00000433165 TGFBR1P36897 503 aa7.53□□□□□ -1.2
CNKSR3-202ENST00000433165 ZFP36L2P47974 494 aaKnown RBP7.53□□□□□ -1.2
CNKSR3-202ENST00000433165 CLCN5P51795 746 aa7.53□□□□□ -1.2
CNKSR3-202ENST00000433165 OR4D2P58180 307 aa7.53□□□□□ -1.2
CNKSR3-202ENST00000433165 POU4F1Q01851 419 aa7.53□□□□□ -1.2
CNKSR3-202ENST00000433165 GRIK2Q13002 908 aa7.53□□□□□ -1.2
CNKSR3-202ENST00000433165 STARD3Q14849 445 aa7.53□□□□□ -1.2
CNKSR3-202ENST00000433165 TAF12Q16514 161 aa7.53□□□□□ -1.2
CNKSR3-202ENST00000433165 RFX4Q33E94 735 aa7.53□□□□□ -1.2
CNKSR3-202ENST00000433165 AGAP9Q5VTM2 703 aa7.53□□□□□ -1.2
CNKSR3-202ENST00000433165 GLYATQ6IB77 296 aa7.53□□□□□ -1.2
CNKSR3-202ENST00000433165 TXNDC11Q6PKC3 985 aa7.53□□□□□ -1.2
CNKSR3-202ENST00000433165 NOXA1Q86UR1 476 aa7.53□□□□□ -1.2
CNKSR3-202ENST00000433165 PYROXD2Q8N2H3 581 aa7.53□□□□□ -1.2
CNKSR3-202ENST00000433165 CCNYQ8ND76 341 aa7.53□□□□□ -1.2
CNKSR3-202ENST00000433165 CNIH3Q8TBE1 160 aa7.53□□□□□ -1.2
CNKSR3-202ENST00000433165 ACBD6Q9BR61 282 aa7.53□□□□□ -1.2
CNKSR3-202ENST00000433165 MLPHQ9BV36 600 aaPredicted RBP7.53□□□□□ -1.2
CNKSR3-202ENST00000433165 ZNF717Q9BY31 904 aaPredicted RBP7.53□□□□□ -1.2
CNKSR3-202ENST00000433165 LRRC3Q9BY71 257 aa7.53□□□□□ -1.2
CNKSR3-202ENST00000433165 MIR1-1HGQ9H1L0 117 aa7.53□□□□□ -1.2
CNKSR3-202ENST00000433165 FAM124BQ9H5Z6 455 aaPredicted RBP7.53□□□□□ -1.2
CNKSR3-202ENST00000433165 RETREG1Q9H6L5 497 aa7.53□□□□□ -1.2
CNKSR3-202ENST00000433165 ACOT13Q9NPJ3 140 aa7.53□□□□□ -1.2
CNKSR3-202ENST00000433165 RPRD1BQ9NQG5 326 aaKnown RBP7.53□□□□□ -1.2
CNKSR3-202ENST00000433165 UXTQ9UBK9 157 aaPredicted RBP7.53□□□□□ -1.2
CNKSR3-202ENST00000433165 FBXO9Q9UK97 447 aaPredicted RBP7.53□□□□□ -1.2
CNKSR3-202ENST00000433165 MKLN1Q9UL63 735 aa7.53□□□□□ -1.2
CNKSR3-202ENST00000433165 FZD10Q9ULW2 581 aa7.53□□□□□ -1.2
CNKSR3-202ENST00000433165 USP22Q9UPT9 525 aa7.53□□□□□ -1.2
CNKSR3-202ENST00000433165 YIPF1Q9Y548 306 aa7.53□□□□□ -1.2
CNKSR3-202ENST00000433165 DNAJC15Q9Y5T4 150 aa7.53□□□□□ -1.2
CNKSR3-202ENST00000433165 V9GYQ6 96 aa7.53□□□□□ -1.2
CNKSR3-202ENST00000433165 TSC2P49815 1807 aa7.53□□□□□ -1.2
CNKSR3-202ENST00000433165 OR2A25A4D2G3 310 aa7.53□□□□□ -1.2
CNKSR3-202ENST00000433165 HMX3A6NHT5 357 aa7.53□□□□□ -1.2
CNKSR3-202ENST00000433165 C9JVG2 144 aa7.53□□□□□ -1.2
CNKSR3-202ENST00000433165 hCG_2039718K7EN88 272 aa7.53□□□□□ -1.2
CNKSR3-202ENST00000433165 SSX4O60224 188 aa7.53□□□□□ -1.2
CNKSR3-202ENST00000433165 NOBOXO60393 691 aa7.53□□□□□ -1.2
CNKSR3-202ENST00000433165 MED26O95402 600 aa7.53□□□□□ -1.2
CNKSR3-202ENST00000433165 ITGB3P05106 788 aa7.53□□□□□ -1.2
CNKSR3-202ENST00000433165 RHOP08100 348 aa7.53□□□□□ -1.2
CNKSR3-202ENST00000433165 CD36P16671 472 aa7.53□□□□□ -1.2
CNKSR3-202ENST00000433165 ALOX12P18054 663 aa7.53□□□□□ -1.2
CNKSR3-202ENST00000433165 ARNTP27540 789 aa7.53□□□□□ -1.2
CNKSR3-202ENST00000433165 WEE1P30291 646 aa7.53□□□□□ -1.2
CNKSR3-202ENST00000433165 SCNN1AP37088 669 aa7.53□□□□□ -1.2
CNKSR3-202ENST00000433165 ETV3P41162 512 aa7.53□□□□□ -1.2
CNKSR3-202ENST00000433165 PRIM2P49643 509 aa7.53□□□□□ -1.2
CNKSR3-202ENST00000433165 EPHA5P54756 1037 aa7.53□□□□□ -1.2
CNKSR3-202ENST00000433165 NFKB2Q00653 900 aa7.53□□□□□ -1.2
CNKSR3-202ENST00000433165 CHRNB3Q05901 458 aa7.53□□□□□ -1.2
CNKSR3-202ENST00000433165 HTR4Q13639 388 aa7.53□□□□□ -1.2
CNKSR3-202ENST00000433165 CSHL1Q14406 222 aa7.53□□□□□ -1.2
CNKSR3-202ENST00000433165 GRB7Q14451 532 aa7.53□□□□□ -1.2
CNKSR3-202ENST00000433165 PARP15Q460N3 678 aa7.53□□□□□ -1.2
CNKSR3-202ENST00000433165 PAGE3Q5JUK9 113 aa7.53□□□□□ -1.2
CNKSR3-202ENST00000433165 ZNF678Q5SXM1 525 aa7.53□□□□□ -1.2
CNKSR3-202ENST00000433165 NXNL2Q5VZ03 156 aa7.53□□□□□ -1.2
CNKSR3-202ENST00000433165 FAM219BQ5XKK7 198 aa7.53□□□□□ -1.2
CNKSR3-202ENST00000433165 UTS2BQ765I0 119 aa7.53□□□□□ -1.2
CNKSR3-202ENST00000433165 B3GNT8Q7Z7M8 397 aa7.53□□□□□ -1.2
CNKSR3-202ENST00000433165 DENND6AQ8IWF6 608 aa7.53□□□□□ -1.2
CNKSR3-202ENST00000433165 KLHDC8BQ8IXV7 354 aa7.53□□□□□ -1.2
CNKSR3-202ENST00000433165 DTWD1Q8N5C7 304 aa7.53□□□□□ -1.2
CNKSR3-202ENST00000433165 NETO2Q8NC67 525 aa7.53□□□□□ -1.2
CNKSR3-202ENST00000433165 OR5H6Q8NGV6 325 aa7.53□□□□□ -1.2
CNKSR3-202ENST00000433165 ITFG1Q8TB96 612 aa7.53□□□□□ -1.2
CNKSR3-202ENST00000433165 SETD6Q8TBK2 473 aa7.53□□□□□ -1.2
CNKSR3-202ENST00000433165 SLC35F5Q8WV83 523 aa7.53□□□□□ -1.2
CNKSR3-202ENST00000433165 DNASE1L2Q92874 299 aa7.53□□□□□ -1.2
CNKSR3-202ENST00000433165 PDLIM5Q96HC4 596 aaKnown RBP7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms