RNA–Protein interactions for RNA: ENST00000431540.7

CDH13-203, Transcript of cadherin 13, humanhuman

TSL 1 (best) BASIC

Gene CDH13, Length 831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-203ENST00000431540 SPOPO43791 374 aa7.98□□□□□ -1.13
CDH13-203ENST00000431540 LCA5LO95447 670 aa7.98□□□□□ -1.13
CDH13-203ENST00000431540 AGTP01019 485 aa7.98□□□□□ -1.13
CDH13-203ENST00000431540 FTH1P02794 183 aa7.98□□□□□ -1.13
CDH13-203ENST00000431540 POLBP06746 335 aa7.98□□□□□ -1.13
CDH13-203ENST00000431540 COMTP21964 271 aa7.98□□□□□ -1.13
CDH13-203ENST00000431540 CARSP49589 748 aaKnown RBP7.98□□□□□ -1.13
CDH13-203ENST00000431540 CACNG1Q06432 222 aa7.98□□□□□ -1.13
CDH13-203ENST00000431540 CHAF1BQ13112 559 aa7.98□□□□□ -1.13
CDH13-203ENST00000431540 MRPL49Q13405 166 aaKnown RBP7.98□□□□□ -1.13
CDH13-203ENST00000431540 NOMO1Q15155 1222 aa7.98□□□□□ -1.13
CDH13-203ENST00000431540 DNAJC21Q5F1R6 531 aaKnown RBP7.98□□□□□ -1.13
CDH13-203ENST00000431540 MLIPQ5VWP3 458 aa7.98□□□□□ -1.13
CDH13-203ENST00000431540 C1QL3Q5VWW1 255 aa7.98□□□□□ -1.13
CDH13-203ENST00000431540 NPNTQ6UXI9 565 aa7.98□□□□□ -1.13
CDH13-203ENST00000431540 SLC25A41Q8N5S1 370 aa7.98□□□□□ -1.13
CDH13-203ENST00000431540 IPMKQ8NFU5 416 aa7.98□□□□□ -1.13
CDH13-203ENST00000431540 DNAJB8Q8NHS0 232 aa7.98□□□□□ -1.13
CDH13-203ENST00000431540 LRRN4Q8WUT4 740 aa7.98□□□□□ -1.13
CDH13-203ENST00000431540 OR2A14Q96R47 310 aa7.98□□□□□ -1.13
CDH13-203ENST00000431540 TRIM56Q9BRZ2 755 aaKnown RBP7.98□□□□□ -1.13
CDH13-203ENST00000431540 PACSIN1Q9BY11 444 aa7.98□□□□□ -1.13
CDH13-203ENST00000431540 CEP41Q9BYV8 373 aa7.98□□□□□ -1.13
CDH13-203ENST00000431540 LHPPQ9H008 270 aa7.98□□□□□ -1.13
CDH13-203ENST00000431540 EPS8L2Q9H6S3 715 aa7.98□□□□□ -1.13
CDH13-203ENST00000431540 NHEJ1Q9H9Q4 299 aaPredicted RBP7.98□□□□□ -1.13
CDH13-203ENST00000431540 CHST11Q9NPF2 352 aa7.98□□□□□ -1.13
CDH13-203ENST00000431540 NLE1Q9NVX2 485 aaPredicted RBP7.98□□□□□ -1.13
CDH13-203ENST00000431540 PTRH2Q9Y3E5 179 aaKnown RBP7.98□□□□□ -1.13
CDH13-203ENST00000431540 ARL5AQ9Y689 179 aa7.98□□□□□ -1.13
CDH13-203ENST00000431540 CFAP20Q9Y6A4 193 aaKnown RBP7.98□□□□□ -1.13
CDH13-203ENST00000431540 POLQO75417 2590 aa7.97□□□□□ -1.13
CDH13-203ENST00000431540 A0A1B0GX78 115 aa7.97□□□□□ -1.13
CDH13-203ENST00000431540 FITM1A5D6W6 292 aa7.97□□□□□ -1.13
CDH13-203ENST00000431540 A6NL46 340 aa7.97□□□□□ -1.13
CDH13-203ENST00000431540 KPNA5O15131 536 aa7.97□□□□□ -1.13
CDH13-203ENST00000431540 LDB2O43679 373 aa7.97□□□□□ -1.13
CDH13-203ENST00000431540 PHF2O75151 1096 aa7.97□□□□□ -1.13
CDH13-203ENST00000431540 SLC4A1P02730 911 aa7.97□□□□□ -1.13
CDH13-203ENST00000431540 CYC1P08574 325 aa7.97□□□□□ -1.13
CDH13-203ENST00000431540 CHRM5P08912 532 aaPredicted RBP7.97□□□□□ -1.13
CDH13-203ENST00000431540 OR56A5P0C7T3 313 aa7.97□□□□□ -1.13
CDH13-203ENST00000431540 CBSLP0DN79 551 aa7.97□□□□□ -1.13
CDH13-203ENST00000431540 ICAM2P13598 275 aa7.97□□□□□ -1.13
CDH13-203ENST00000431540 AGAP20933 346 aa7.97□□□□□ -1.13
CDH13-203ENST00000431540 PTMSP20962 102 aa7.97□□□□□ -1.13
CDH13-203ENST00000431540 TNFRSF8P28908 595 aa7.97□□□□□ -1.13
CDH13-203ENST00000431540 OTX2P32243 289 aa7.97□□□□□ -1.13
CDH13-203ENST00000431540 PTGER4P35408 488 aa7.97□□□□□ -1.13
CDH13-203ENST00000431540 CBSP35520 551 aa7.97□□□□□ -1.13
CDH13-203ENST00000431540 CHRNA4P43681 627 aa7.97□□□□□ -1.13
CDH13-203ENST00000431540 GLRBP48167 497 aa7.97□□□□□ -1.13
CDH13-203ENST00000431540 ZNF140P52738 457 aaPredicted RBP7.97□□□□□ -1.13
CDH13-203ENST00000431540 RIPPLY3P57055 190 aa7.97□□□□□ -1.13
CDH13-203ENST00000431540 RELAQ04206 551 aa7.97□□□□□ -1.13
CDH13-203ENST00000431540 NAA30Q147X3 362 aaPredicted RBP7.97□□□□□ -1.13
CDH13-203ENST00000431540 GRM7Q14831 915 aa7.97□□□□□ -1.13
CDH13-203ENST00000431540 ZNF169Q14929 603 aaPredicted RBP7.97□□□□□ -1.13
CDH13-203ENST00000431540 KYNUQ16719 465 aa7.97□□□□□ -1.13
CDH13-203ENST00000431540 PARP6Q2NL67 630 aa7.97□□□□□ -1.13
CDH13-203ENST00000431540 ANKRD20A2Q5SQ80 823 aa7.97□□□□□ -1.13
CDH13-203ENST00000431540 ANKRD20A1Q5TYW2 823 aa7.97□□□□□ -1.13
CDH13-203ENST00000431540 ANKRD20A3Q5VUR7 823 aa7.97□□□□□ -1.13
CDH13-203ENST00000431540 DENND5AQ6IQ26 1287 aa7.97□□□□□ -1.13
CDH13-203ENST00000431540 C11orf63Q6NUN7 778 aa7.97□□□□□ -1.13
CDH13-203ENST00000431540 PRMT9Q6P2P2 845 aa7.97□□□□□ -1.13
CDH13-203ENST00000431540 UNC5AQ6ZN44 842 aa7.97□□□□□ -1.13
CDH13-203ENST00000431540 NLRP9Q7RTR0 991 aa7.97□□□□□ -1.13
CDH13-203ENST00000431540 PPP1R32Q7Z5V6 425 aa7.97□□□□□ -1.13
CDH13-203ENST00000431540 LINC00523Q86TU6 105 aa7.97□□□□□ -1.13
CDH13-203ENST00000431540 ZC3H18Q86VM9 953 aaKnown RBP7.97□□□□□ -1.13
CDH13-203ENST00000431540 CNGA4Q8IV77 575 aa7.97□□□□□ -1.13
CDH13-203ENST00000431540 CDKL3Q8IVW4 592 aaPredicted RBP7.97□□□□□ -1.13
CDH13-203ENST00000431540 FLVCR1-AS1Q8TAF5 88 aa7.97□□□□□ -1.13
CDH13-203ENST00000431540 DNAJB14Q8TBM8 379 aa7.97□□□□□ -1.13
CDH13-203ENST00000431540 HAS2Q92819 552 aa7.97□□□□□ -1.13
CDH13-203ENST00000431540 C19orf60Q96EN9 201 aa7.97□□□□□ -1.13
CDH13-203ENST00000431540 CDKN2AIPNLQ96HQ2 116 aa7.97□□□□□ -1.13
CDH13-203ENST00000431540 ZNF285Q96NJ3 590 aa7.97□□□□□ -1.13
CDH13-203ENST00000431540 TSSK1BQ9BXA7 367 aa7.97□□□□□ -1.13
CDH13-203ENST00000431540 RAB11FIP5Q9BXF6 653 aa7.97□□□□□ -1.13
CDH13-203ENST00000431540 SAE1Q9UBE0 346 aaPredicted RBP7.97□□□□□ -1.13
CDH13-203ENST00000431540 FKBPLQ9UIM3 349 aa7.97□□□□□ -1.13
CDH13-203ENST00000431540 PCDHGB6Q9Y5F9 930 aa7.97□□□□□ -1.13
CDH13-203ENST00000431540 NCOA6Q14686 2063 aaPredicted RBP7.97□□□□□ -1.13
CDH13-203ENST00000431540 MED13LQ71F56 2210 aa7.97□□□□□ -1.13
CDH13-203ENST00000431540 PCSK5Q92824 1860 aa7.96□□□□□ -1.13
CDH13-203ENST00000431540 SLC5A10A0PJK1 596 aa7.96□□□□□ -1.14
CDH13-203ENST00000431540 MROH6A6NGR9 719 aa7.96□□□□□ -1.14
CDH13-203ENST00000431540 VSTM2BA6NLU5 285 aa7.96□□□□□ -1.14
CDH13-203ENST00000431540 DSCR3O14972 297 aa7.96□□□□□ -1.14
CDH13-203ENST00000431540 TJP3O95049 919 aa7.96□□□□□ -1.14
CDH13-203ENST00000431540 PECAM1P16284 738 aaPredicted RBP7.96□□□□□ -1.14
CDH13-203ENST00000431540 UGT2B7P16662 529 aa7.96□□□□□ -1.14
CDH13-203ENST00000431540 PBLDP30039 288 aaPredicted RBP7.96□□□□□ -1.14
CDH13-203ENST00000431540 CA5AP35218 305 aa7.96□□□□□ -1.14
CDH13-203ENST00000431540 RAB28P51157 221 aa7.96□□□□□ -1.14
CDH13-203ENST00000431540 DYNLT1P63172 113 aa7.96□□□□□ -1.14
CDH13-203ENST00000431540 OTUD4Q01804 1114 aaKnown RBP7.96□□□□□ -1.14
CDH13-203ENST00000431540 P3H1Q32P28 736 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms