RNA–Protein interactions for RNA: ENST00000430158.5

USP40-205, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 1,047 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-205ENST00000430158 CATP04040 527 aaKnown RBP12.02□□□□□ -0.49
USP40-205ENST00000430158 C2P06681 752 aa12.02□□□□□ -0.49
USP40-205ENST00000430158 C8GP07360 202 aa12.02□□□□□ -0.49
USP40-205ENST00000430158 INHBAP08476 426 aa12.02□□□□□ -0.49
USP40-205ENST00000430158 CHRM5P08912 532 aaPredicted RBP12.02□□□□□ -0.49
USP40-205ENST00000430158 ANKRD34CP0C6C1 535 aa12.02□□□□□ -0.49
USP40-205ENST00000430158 JUPP14923 745 aa12.02□□□□□ -0.49
USP40-205ENST00000430158 AMD1P17707 334 aa12.02□□□□□ -0.49
USP40-205ENST00000430158 POLR2CP19387 275 aaPredicted RBP12.02□□□□□ -0.49
USP40-205ENST00000430158 SPINK2P20155 84 aa12.02□□□□□ -0.49
USP40-205ENST00000430158 MPSTP25325 297 aa12.02□□□□□ -0.49
USP40-205ENST00000430158 CNTFP26441 200 aa12.02□□□□□ -0.49
USP40-205ENST00000430158 SLC26A3P40879 764 aa12.02□□□□□ -0.49
USP40-205ENST00000430158 MAPK9P45984 424 aa12.02□□□□□ -0.49
USP40-205ENST00000430158 SP140Q13342 867 aa12.02□□□□□ -0.49
USP40-205ENST00000430158 PLCL1Q15111 1095 aa12.02□□□□□ -0.49
USP40-205ENST00000430158 SH2D5Q6ZV89 423 aa12.02□□□□□ -0.49
USP40-205ENST00000430158 UBE2R2Q712K3 238 aaPredicted RBP12.02□□□□□ -0.49
USP40-205ENST00000430158 PRSS42Q7Z5A4 293 aa12.02□□□□□ -0.49
USP40-205ENST00000430158 CLEC14AQ86T13 490 aa12.02□□□□□ -0.49
USP40-205ENST00000430158 PLXDC1Q8IUK5 500 aa12.02□□□□□ -0.49
USP40-205ENST00000430158 MYO1HQ8N1T3 1032 aa12.02□□□□□ -0.49
USP40-205ENST00000430158 SPATA6LQ8N4H0 392 aa12.02□□□□□ -0.49
USP40-205ENST00000430158 ZNF480Q8WV37 535 aa12.02□□□□□ -0.49
USP40-205ENST00000430158 SKA2Q8WVK7 121 aaPredicted RBP12.02□□□□□ -0.49
USP40-205ENST00000430158 UBLCP1Q8WVY7 318 aaPredicted RBP12.02□□□□□ -0.49
USP40-205ENST00000430158 KLHL6Q8WZ60 621 aa12.02□□□□□ -0.49
USP40-205ENST00000430158 PTERQ96BW5 349 aa12.02□□□□□ -0.49
USP40-205ENST00000430158 GRAMD1AQ96CP6 724 aa12.02□□□□□ -0.49
USP40-205ENST00000430158 LIN37Q96GY3 246 aaPredicted RBP12.02□□□□□ -0.49
USP40-205ENST00000430158 AHCYL2Q96HN2 611 aaKnown RBP12.02□□□□□ -0.49
USP40-205ENST00000430158 CCDC74BQ96LY2 380 aa12.02□□□□□ -0.49
USP40-205ENST00000430158 DEPDC7Q96QD5 511 aa12.02□□□□□ -0.49
USP40-205ENST00000430158 SCNM1Q9BWG6 230 aa12.02□□□□□ -0.49
USP40-205ENST00000430158 PITPNM3Q9BZ71 974 aa12.02□□□□□ -0.49
USP40-205ENST00000430158 PARVBQ9HBI1 364 aa12.02□□□□□ -0.49
USP40-205ENST00000430158 SPATA7Q9P0W8 599 aa12.02□□□□□ -0.49
USP40-205ENST00000430158 NEUROG3Q9Y4Z2 214 aa12.02□□□□□ -0.49
USP40-205ENST00000430158 MAP1BP46821 2468 aaKnown RBP12.01□□□□□ -0.49
USP40-205ENST00000430158 E7ENX8 843 aa12.01□□□□□ -0.49
USP40-205ENST00000430158 TOX3O15405 576 aaPredicted RBP12.01□□□□□ -0.49
USP40-205ENST00000430158 ZBTB14O43829 449 aa12.01□□□□□ -0.49
USP40-205ENST00000430158 SLC16A8O95907 504 aa12.01□□□□□ -0.49
USP40-205ENST00000430158 SNRPAP09012 282 aaKnown RBP12.01□□□□□ -0.49
USP40-205ENST00000430158 CCDC166P0CW27 439 aa12.01□□□□□ -0.49
USP40-205ENST00000430158 IMPA1P29218 277 aa12.01□□□□□ -0.49
USP40-205ENST00000430158 PRDX3P30048 256 aaKnown RBP12.01□□□□□ -0.49
USP40-205ENST00000430158 INHBCP55103 352 aa12.01□□□□□ -0.49
USP40-205ENST00000430158 IRF9Q00978 393 aa12.01□□□□□ -0.49
USP40-205ENST00000430158 TAP2Q03519 686 aa12.01□□□□□ -0.49
USP40-205ENST00000430158 TRA2AQ13595 282 aaKnown RBP eCLIP12.01□□□□□ -0.49
USP40-205ENST00000430158 FASTKQ14296 549 aaKnown RBP12.01□□□□□ -0.49
USP40-205ENST00000430158 ARHGAP19Q14CB8 494 aa12.01□□□□□ -0.49
USP40-205ENST00000430158 OR4D1Q15615 310 aa12.01□□□□□ -0.49
USP40-205ENST00000430158 MAP9Q49MG5 647 aa12.01□□□□□ -0.49
USP40-205ENST00000430158 ANKS6Q68DC2 871 aa12.01□□□□□ -0.49
USP40-205ENST00000430158 KLHL35Q6PF15 583 aa12.01□□□□□ -0.49
USP40-205ENST00000430158 MBOAT1Q6ZNC8 495 aa12.01□□□□□ -0.49
USP40-205ENST00000430158 ISCA2Q86U28 154 aa12.01□□□□□ -0.49
USP40-205ENST00000430158 OOSP2Q86WS3 158 aa12.01□□□□□ -0.49
USP40-205ENST00000430158 IQCKQ8N0W5 287 aa12.01□□□□□ -0.49
USP40-205ENST00000430158 CYP4X1Q8N118 509 aa12.01□□□□□ -0.49
USP40-205ENST00000430158 PLD6Q8N2A8 252 aaKnown RBP12.01□□□□□ -0.49
USP40-205ENST00000430158 OR2W6PQ8NHA6 318 aa12.01□□□□□ -0.49
USP40-205ENST00000430158 MAGEC3Q8TD91 643 aa12.01□□□□□ -0.49
USP40-205ENST00000430158 WNT2BQ93097 391 aa12.01□□□□□ -0.49
USP40-205ENST00000430158 KIAA1191Q96A73 305 aa12.01□□□□□ -0.49
USP40-205ENST00000430158 SLC41A2Q96JW4 573 aa12.01□□□□□ -0.49
USP40-205ENST00000430158 TMEM74Q96NL1 305 aa12.01□□□□□ -0.49
USP40-205ENST00000430158 TGM7Q96PF1 710 aa12.01□□□□□ -0.49
USP40-205ENST00000430158 CD180Q99467 661 aa12.01□□□□□ -0.49
USP40-205ENST00000430158 MAP3K3Q99759 626 aa12.01□□□□□ -0.49
USP40-205ENST00000430158 TMEM109Q9BVC6 243 aa12.01□□□□□ -0.49
USP40-205ENST00000430158 SYNDIG1Q9H7V2 258 aa12.01□□□□□ -0.49
USP40-205ENST00000430158 ACTR10Q9NZ32 417 aa12.01□□□□□ -0.49
USP40-205ENST00000430158 CTNNAL1Q9UBT7 734 aa12.01□□□□□ -0.49
USP40-205ENST00000430158 MSRB2Q9Y3D2 182 aa12.01□□□□□ -0.49
USP40-205ENST00000430158 A0A096LPK6 155 aa12□□□□□ -0.49
USP40-205ENST00000430158 IGHV5-51A0A0C4DH38 117 aa12□□□□□ -0.49
USP40-205ENST00000430158 NPEPPSL1A6NEC2 478 aa12□□□□□ -0.49
USP40-205ENST00000430158 TMX2-CTNND1H3BSU7 103 aa12□□□□□ -0.49
USP40-205ENST00000430158 MATN2O00339 956 aa12□□□□□ -0.49
USP40-205ENST00000430158 HGSO14964 777 aaPredicted RBP12□□□□□ -0.49
USP40-205ENST00000430158 KRT38O76015 456 aa12□□□□□ -0.49
USP40-205ENST00000430158 CAPNS1P04632 268 aa12□□□□□ -0.49
USP40-205ENST00000430158 ENO2P09104 434 aaPredicted RBP12□□□□□ -0.49
USP40-205ENST00000430158 UGT2B7P16662 529 aa12□□□□□ -0.49
USP40-205ENST00000430158 SERPINB8P50452 374 aa12□□□□□ -0.49
USP40-205ENST00000430158 SLC12A2P55011 1212 aa12□□□□□ -0.49
USP40-205ENST00000430158 ATP6V0D1P61421 351 aa12□□□□□ -0.49
USP40-205ENST00000430158 CSHL1Q14406 222 aa12□□□□□ -0.49
USP40-205ENST00000430158 KIR2DS3Q14952 304 aa12□□□□□ -0.49
USP40-205ENST00000430158 TSNQ15631 228 aaKnown RBP12□□□□□ -0.49
USP40-205ENST00000430158 BEND6Q5SZJ8 279 aaPredicted RBP12□□□□□ -0.49
USP40-205ENST00000430158 FBXO38Q6PIJ6 1188 aa12□□□□□ -0.49
USP40-205ENST00000430158 SPESP1Q6UW49 350 aa12□□□□□ -0.49
USP40-205ENST00000430158 CCDC91Q7Z6B0 441 aa12□□□□□ -0.49
USP40-205ENST00000430158 CARFQ8N187 725 aa12□□□□□ -0.49
USP40-205ENST00000430158 C2orf73Q8N5S3 287 aaPredicted RBP12□□□□□ -0.49
USP40-205ENST00000430158 BMPERQ8N8U9 685 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms