RNA–Protein interactions for RNA: ENST00000430118.1

HMGB3-203, Transcript of high mobility group box 3, humanhuman

TSL 1 (best)

Gene HMGB3, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-203ENST00000430118 MIS18BP1Q6P0N0 1132 aa4□□□□□ -1.77
HMGB3-203ENST00000430118 PAPD4Q6PIY7 484 aaKnown RBP4□□□□□ -1.77
HMGB3-203ENST00000430118 CRIP3Q6Q6R5 217 aa4□□□□□ -1.77
HMGB3-203ENST00000430118 FAM198BQ6UWH4 519 aa4□□□□□ -1.77
HMGB3-203ENST00000430118 OLFML1Q6UWY5 402 aa4□□□□□ -1.77
HMGB3-203ENST00000430118 LINC00696Q6ZRV3 163 aa4□□□□□ -1.77
HMGB3-203ENST00000430118 ARMCX2Q7L311 632 aa4□□□□□ -1.77
HMGB3-203ENST00000430118 ASCL5Q7RTU5 278 aa4□□□□□ -1.77
HMGB3-203ENST00000430118 ATG9AQ7Z3C6 839 aa4□□□□□ -1.77
HMGB3-203ENST00000430118 CENPVQ7Z7K6 275 aaPredicted RBP4□□□□□ -1.77
HMGB3-203ENST00000430118 DRAXINQ8NBI3 349 aaPredicted RBP4□□□□□ -1.77
HMGB3-203ENST00000430118 RBM15BQ8NDT2 890 aaKnown RBP4□□□□□ -1.77
HMGB3-203ENST00000430118 EXD1Q8NHP7 514 aa4□□□□□ -1.77
HMGB3-203ENST00000430118 CCDC26Q8TAB7 109 aa4□□□□□ -1.77
HMGB3-203ENST00000430118 EXOC6Q8TAG9 804 aa4□□□□□ -1.77
HMGB3-203ENST00000430118 MPLKIPQ8TAP9 179 aa4□□□□□ -1.77
HMGB3-203ENST00000430118 GOLGA5Q8TBA6 731 aa4□□□□□ -1.77
HMGB3-203ENST00000430118 ACER1Q8TDN7 264 aa4□□□□□ -1.77
HMGB3-203ENST00000430118 PTP4A1Q93096 173 aa4□□□□□ -1.77
HMGB3-203ENST00000430118 EME1Q96AY2 570 aa4□□□□□ -1.77
HMGB3-203ENST00000430118 CDHR1Q96JP9 859 aa4□□□□□ -1.77
HMGB3-203ENST00000430118 CAMK1GQ96NX5 476 aa4□□□□□ -1.77
HMGB3-203ENST00000430118 MS4A10Q96PG2 267 aa4□□□□□ -1.77
HMGB3-203ENST00000430118 GFM1Q96RP9 751 aaKnown RBP4□□□□□ -1.77
HMGB3-203ENST00000430118 SCNM1Q9BWG6 230 aa4□□□□□ -1.77
HMGB3-203ENST00000430118 FUT8Q9BYC5 575 aa4□□□□□ -1.77
HMGB3-203ENST00000430118 FAM107BQ9H098 131 aa4□□□□□ -1.77
HMGB3-203ENST00000430118 TRPV6Q9H1D0 765 aa4□□□□□ -1.77
HMGB3-203ENST00000430118 PPIL3Q9H2H8 161 aaKnown RBP4□□□□□ -1.77
HMGB3-203ENST00000430118 PIGMQ9H3S5 423 aa4□□□□□ -1.77
HMGB3-203ENST00000430118 MFSD1Q9H3U5 465 aa4□□□□□ -1.77
HMGB3-203ENST00000430118 PPP1R3EQ9H7J1 279 aa4□□□□□ -1.77
HMGB3-203ENST00000430118 MAP6D1Q9H9H5 199 aa4□□□□□ -1.77
HMGB3-203ENST00000430118 ACSS1Q9NUB1 689 aaPredicted RBP4□□□□□ -1.77
HMGB3-203ENST00000430118 ZNF446Q9NWS9 450 aa4□□□□□ -1.77
HMGB3-203ENST00000430118 DDX43Q9NXZ2 648 aaKnown RBP4□□□□□ -1.77
HMGB3-203ENST00000430118 HMG20BQ9P0W2 317 aa4□□□□□ -1.77
HMGB3-203ENST00000430118 CDH7Q9ULB5 785 aa4□□□□□ -1.77
HMGB3-203ENST00000430118 FRMD4BQ9Y2L6 1034 aa4□□□□□ -1.77
HMGB3-203ENST00000430118 SQORQ9Y6N5 450 aa4□□□□□ -1.77
HMGB3-203ENST00000430118 PRRC2BQ5JSZ5 2229 aaKnown RBP4□□□□□ -1.77
HMGB3-203ENST00000430118 SIP14410 1827 aa4□□□□□ -1.77
HMGB3-203ENST00000430118 ZNF318Q5VUA4 2279 aa4□□□□□ -1.77
HMGB3-203ENST00000430118 A0A0U1RQK1 487 aa3.99□□□□□ -1.77
HMGB3-203ENST00000430118 ZNF320A2RRD8 509 aa3.99□□□□□ -1.77
HMGB3-203ENST00000430118 LINC01553A4QN01 128 aa3.99□□□□□ -1.77
HMGB3-203ENST00000430118 GOLGA6L9A6NEM1 432 aa3.99□□□□□ -1.77
HMGB3-203ENST00000430118 WIPF3A6NGB9 483 aa3.99□□□□□ -1.77
HMGB3-203ENST00000430118 EIF4E1BA6NMX2 242 aaKnown RBP3.99□□□□□ -1.77
HMGB3-203ENST00000430118 KDM4EB2RXH2 506 aaPredicted RBP3.99□□□□□ -1.77
HMGB3-203ENST00000430118 VWA5AO00534 786 aa3.99□□□□□ -1.77
HMGB3-203ENST00000430118 MBTPS2O43462 519 aa3.99□□□□□ -1.77
HMGB3-203ENST00000430118 ATP8B1O43520 1251 aa3.99□□□□□ -1.77
HMGB3-203ENST00000430118 RPS6KA5O75582 802 aa3.99□□□□□ -1.77
HMGB3-203ENST00000430118 BCAR3O75815 825 aa3.99□□□□□ -1.77
HMGB3-203ENST00000430118 SNAI1O95863 264 aaPredicted RBP3.99□□□□□ -1.77
HMGB3-203ENST00000430118 BCL10O95999 233 aa3.99□□□□□ -1.77
HMGB3-203ENST00000430118 SKILP12757 684 aa3.99□□□□□ -1.77
HMGB3-203ENST00000430118 C6P13671 934 aa3.99□□□□□ -1.77
HMGB3-203ENST00000430118 STMN1P16949 149 aa3.99□□□□□ -1.77
HMGB3-203ENST00000430118 PROZP22891 400 aa3.99□□□□□ -1.77
HMGB3-203ENST00000430118 PSMA3P25788 255 aa3.99□□□□□ -1.77
HMGB3-203ENST00000430118 ADORA1P30542 326 aa3.99□□□□□ -1.77
HMGB3-203ENST00000430118 PRPHP41219 470 aa3.99□□□□□ -1.77
HMGB3-203ENST00000430118 PPP3CCP48454 512 aa3.99□□□□□ -1.77
HMGB3-203ENST00000430118 TPM4P67936 248 aa3.99□□□□□ -1.77
HMGB3-203ENST00000430118 TUBB4BP68371 445 aa3.99□□□□□ -1.77
HMGB3-203ENST00000430118 CSNK2A1P68400 391 aaPredicted RBP3.99□□□□□ -1.77
HMGB3-203ENST00000430118 BEX3Q00994 111 aa3.99□□□□□ -1.77
HMGB3-203ENST00000430118 UBXN1Q04323 297 aa3.99□□□□□ -1.77
HMGB3-203ENST00000430118 NCBP1Q09161 790 aaKnown RBP3.99□□□□□ -1.77
HMGB3-203ENST00000430118 GPM6BQ13491 265 aa3.99□□□□□ -1.77
HMGB3-203ENST00000430118 PTK6Q13882 451 aa3.99□□□□□ -1.77
HMGB3-203ENST00000430118 RBBP5Q15291 538 aaKnown RBP3.99□□□□□ -1.77
HMGB3-203ENST00000430118 DECR1Q16698 335 aa3.99□□□□□ -1.77
HMGB3-203ENST00000430118 TCEAL5Q5H9L2 206 aa3.99□□□□□ -1.77
HMGB3-203ENST00000430118 DCST1Q5T197 706 aa3.99□□□□□ -1.77
HMGB3-203ENST00000430118 TMEM211Q6ICI0 200 aa3.99□□□□□ -1.77
HMGB3-203ENST00000430118 DPY19L2P1Q6NXN4 242 aa3.99□□□□□ -1.77
HMGB3-203ENST00000430118 MOXD1Q6UVY6 613 aa3.99□□□□□ -1.77
HMGB3-203ENST00000430118 PIWIL3Q7Z3Z3 882 aaKnown RBP3.99□□□□□ -1.77
HMGB3-203ENST00000430118 SPATA19Q7Z5L4 167 aa3.99□□□□□ -1.77
HMGB3-203ENST00000430118 IRF2BP2Q7Z5L9 587 aa3.99□□□□□ -1.77
HMGB3-203ENST00000430118 MRGPRGQ86SM5 289 aa3.99□□□□□ -1.77
HMGB3-203ENST00000430118 PALB2Q86YC2 1186 aa3.99□□□□□ -1.77
HMGB3-203ENST00000430118 CCDC170Q8IYT3 715 aa3.99□□□□□ -1.77
HMGB3-203ENST00000430118 MYOCDQ8IZQ8 938 aa3.99□□□□□ -1.77
HMGB3-203ENST00000430118 C10orf53Q8N6V4 93 aa3.99□□□□□ -1.77
HMGB3-203ENST00000430118 ATAD1Q8NBU5 361 aa3.99□□□□□ -1.77
HMGB3-203ENST00000430118 SLC38A9Q8NBW4 561 aa3.99□□□□□ -1.77
HMGB3-203ENST00000430118 CSNK2A3Q8NEV1 391 aa3.99□□□□□ -1.77
HMGB3-203ENST00000430118 FIBINQ8TAL6 211 aa3.99□□□□□ -1.77
HMGB3-203ENST00000430118 HM13Q8TCT9 377 aa3.99□□□□□ -1.77
HMGB3-203ENST00000430118 MAGEC3Q8TD91 643 aa3.99□□□□□ -1.77
HMGB3-203ENST00000430118 ROBO4Q8WZ75 1007 aa3.99□□□□□ -1.77
HMGB3-203ENST00000430118 CORO2AQ92828 525 aa3.99□□□□□ -1.77
HMGB3-203ENST00000430118 TAAR8Q969N4 342 aa3.99□□□□□ -1.77
HMGB3-203ENST00000430118 LINC00615Q96LM1 132 aaPredicted RBP3.99□□□□□ -1.77
HMGB3-203ENST00000430118 ZNF396Q96N95 335 aaPredicted RBP3.99□□□□□ -1.77
HMGB3-203ENST00000430118 MTG1Q9BT17 334 aaPredicted RBP3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms