RNA–Protein interactions for RNA: ENST00000428767.1

ALMS1P1-201, Transcript of ALMS1, centrosome and basal body associated protein pseudogene 1, humanhuman

BASIC

Gene ALMS1P1, Length 921 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1P1-201ENST00000428767 CYLC1P35663 651 aaPredicted RBP11.12□□□□□ -0.63
ALMS1P1-201ENST00000428767 OR1D4P47884 311 aa11.12□□□□□ -0.63
ALMS1P1-201ENST00000428767 ARSEP51690 589 aa11.12□□□□□ -0.63
ALMS1P1-201ENST00000428767 EEF1A2Q05639 463 aaKnown RBP11.12□□□□□ -0.63
ALMS1P1-201ENST00000428767 LTBQ06643 244 aa11.12□□□□□ -0.63
ALMS1P1-201ENST00000428767 PTPRCAPQ14761 206 aa11.12□□□□□ -0.63
ALMS1P1-201ENST00000428767 LONRF1Q17RB8 773 aa11.12□□□□□ -0.63
ALMS1P1-201ENST00000428767 SLC5A12Q1EHB4 618 aa11.12□□□□□ -0.63
ALMS1P1-201ENST00000428767 TFDP3Q5H9I0 405 aa11.12□□□□□ -0.63
ALMS1P1-201ENST00000428767 GLT6D1Q7Z4J2 308 aa11.12□□□□□ -0.63
ALMS1P1-201ENST00000428767 CPNE8Q86YQ8 564 aa11.12□□□□□ -0.63
ALMS1P1-201ENST00000428767 SLC25A41Q8N5S1 370 aa11.12□□□□□ -0.63
ALMS1P1-201ENST00000428767 PQLC3Q8N755 202 aa11.12□□□□□ -0.63
ALMS1P1-201ENST00000428767 AMER2Q8N7J2 671 aa11.12□□□□□ -0.63
ALMS1P1-201ENST00000428767 FAM71BQ8TC56 605 aa11.12□□□□□ -0.63
ALMS1P1-201ENST00000428767 HM13Q8TCT9 377 aa11.12□□□□□ -0.63
ALMS1P1-201ENST00000428767 BLOC1S5Q8TDH9 187 aa11.12□□□□□ -0.63
ALMS1P1-201ENST00000428767 CA5BP1Q8WTZ4 195 aa11.12□□□□□ -0.63
ALMS1P1-201ENST00000428767 HAS2Q92819 552 aa11.12□□□□□ -0.63
ALMS1P1-201ENST00000428767 OR2A14Q96R47 310 aa11.12□□□□□ -0.63
ALMS1P1-201ENST00000428767 CCM2Q9BSQ5 444 aa11.12□□□□□ -0.63
ALMS1P1-201ENST00000428767 SLC25A51Q9H1U9 297 aa11.12□□□□□ -0.63
ALMS1P1-201ENST00000428767 CCM2LQ9NUG4 571 aaPredicted RBP11.12□□□□□ -0.63
ALMS1P1-201ENST00000428767 SPTLC3Q9NUV7 552 aa11.12□□□□□ -0.63
ALMS1P1-201ENST00000428767 SPHK1Q9NYA1 384 aa11.12□□□□□ -0.63
ALMS1P1-201ENST00000428767 IL17CQ9P0M4 197 aa11.12□□□□□ -0.63
ALMS1P1-201ENST00000428767 TNFRSF10DQ9UBN6 386 aa11.12□□□□□ -0.63
ALMS1P1-201ENST00000428767 ZKSCAN5Q9Y2L8 839 aa11.12□□□□□ -0.63
ALMS1P1-201ENST00000428767 KLHL20Q9Y2M5 609 aa11.12□□□□□ -0.63
ALMS1P1-201ENST00000428767 MRPS2Q9Y399 296 aaKnown RBP11.12□□□□□ -0.63
ALMS1P1-201ENST00000428767 MAU2Q9Y6X3 613 aa11.12□□□□□ -0.63
ALMS1P1-201ENST00000428767 CSPG4Q6UVK1 2322 aa11.11□□□□□ -0.63
ALMS1P1-201ENST00000428767 NSG1A0A0A6YYJ2 146 aa11.11□□□□□ -0.63
ALMS1P1-201ENST00000428767 IFRD1O00458 451 aaPredicted RBP11.11□□□□□ -0.63
ALMS1P1-201ENST00000428767 DDX3XO00571 662 aaKnown RBP eCLIP11.11□□□□□ -0.63
ALMS1P1-201ENST00000428767 DSCR3O14972 297 aa11.11□□□□□ -0.63
ALMS1P1-201ENST00000428767 SGTAO43765 313 aa11.11□□□□□ -0.63
ALMS1P1-201ENST00000428767 PRAMEF2O60811 474 aa11.11□□□□□ -0.63
ALMS1P1-201ENST00000428767 PRAMEF1O95521 474 aa11.11□□□□□ -0.63
ALMS1P1-201ENST00000428767 ALBP02768 609 aa11.11□□□□□ -0.63
ALMS1P1-201ENST00000428767 PIM1P11309 404 aaPredicted RBP11.11□□□□□ -0.63
ALMS1P1-201ENST00000428767 NSG1P42857 185 aa11.11□□□□□ -0.63
ALMS1P1-201ENST00000428767 CHRNA4P43681 627 aa11.11□□□□□ -0.63
ALMS1P1-201ENST00000428767 GCGRP47871 477 aa11.11□□□□□ -0.63
ALMS1P1-201ENST00000428767 PPIDQ08752 370 aaKnown RBP11.11□□□□□ -0.63
ALMS1P1-201ENST00000428767 PIGHQ14442 188 aaPredicted RBP11.11□□□□□ -0.63
ALMS1P1-201ENST00000428767 CEBPEQ15744 281 aa11.11□□□□□ -0.63
ALMS1P1-201ENST00000428767 SLC18A3Q16572 532 aa11.11□□□□□ -0.63
ALMS1P1-201ENST00000428767 BCL7AQ4VC05 210 aa11.11□□□□□ -0.63
ALMS1P1-201ENST00000428767 ZDHHC20Q5W0Z9 365 aa11.11□□□□□ -0.63
ALMS1P1-201ENST00000428767 HIBCHQ6NVY1 386 aaPredicted RBP11.11□□□□□ -0.63
ALMS1P1-201ENST00000428767 CNSTQ6PJW8 725 aa11.11□□□□□ -0.63
ALMS1P1-201ENST00000428767 ARHGEF18Q6ZSZ5 1173 aa11.11□□□□□ -0.63
ALMS1P1-201ENST00000428767 SPPL2CQ8IUH8 684 aa11.11□□□□□ -0.63
ALMS1P1-201ENST00000428767 DNAJC22Q8N4W6 341 aa11.11□□□□□ -0.63
ALMS1P1-201ENST00000428767 SUN3Q8TAQ9 357 aa11.11□□□□□ -0.63
ALMS1P1-201ENST00000428767 ZNF398Q8TD17 642 aa11.11□□□□□ -0.63
ALMS1P1-201ENST00000428767 TADA1Q96BN2 335 aa11.11□□□□□ -0.63
ALMS1P1-201ENST00000428767 MDFIQ99750 246 aa11.11□□□□□ -0.63
ALMS1P1-201ENST00000428767 TREX2Q9BQ50 279 aaPredicted RBP11.11□□□□□ -0.63
ALMS1P1-201ENST00000428767 DESI2Q9BSY9 194 aa11.11□□□□□ -0.63
ALMS1P1-201ENST00000428767 SLC26A1Q9H2B4 701 aa11.11□□□□□ -0.63
ALMS1P1-201ENST00000428767 OR52A5Q9H2C5 316 aa11.11□□□□□ -0.63
ALMS1P1-201ENST00000428767 CXXC4Q9H2H0 198 aa11.11□□□□□ -0.63
ALMS1P1-201ENST00000428767 COG4Q9H9E3 785 aa11.11□□□□□ -0.63
ALMS1P1-201ENST00000428767 EURLQ9NYK6 297 aa11.11□□□□□ -0.63
ALMS1P1-201ENST00000428767 ANAPC7Q9UJX3 599 aa11.11□□□□□ -0.63
ALMS1P1-201ENST00000428767 PLCL2Q9UPR0 1127 aa11.11□□□□□ -0.63
ALMS1P1-201ENST00000428767 REXO2Q9Y3B8 237 aaKnown RBP11.11□□□□□ -0.63
ALMS1P1-201ENST00000428767 PKP3Q9Y446 797 aa11.11□□□□□ -0.63
ALMS1P1-201ENST00000428767 HEY1Q9Y5J3 304 aa11.11□□□□□ -0.63
ALMS1P1-201ENST00000428767 HRNRQ86YZ3 2850 aaPredicted RBP11.1□□□□□ -0.63
ALMS1P1-201ENST00000428767 WFS1O76024 890 aa11.1□□□□□ -0.63
ALMS1P1-201ENST00000428767 SLCO2B1O94956 709 aa11.1□□□□□ -0.63
ALMS1P1-201ENST00000428767 CHRM5P08912 532 aaPredicted RBP11.1□□□□□ -0.63
ALMS1P1-201ENST00000428767 PYGMP11217 842 aa11.1□□□□□ -0.63
ALMS1P1-201ENST00000428767 COX6A1P12074 109 aa11.1□□□□□ -0.63
ALMS1P1-201ENST00000428767 ABOP16442 354 aa11.1□□□□□ -0.63
ALMS1P1-201ENST00000428767 PDHA2P29803 388 aa11.1□□□□□ -0.63
ALMS1P1-201ENST00000428767 ARSFP54793 590 aa11.1□□□□□ -0.63
ALMS1P1-201ENST00000428767 KLC1Q07866 573 aa11.1□□□□□ -0.63
ALMS1P1-201ENST00000428767 BOP1Q14137 746 aaKnown RBP11.1□□□□□ -0.63
ALMS1P1-201ENST00000428767 SPA17Q15506 151 aa11.1□□□□□ -0.63
ALMS1P1-201ENST00000428767 SIRPB2Q5JXA9 342 aa11.1□□□□□ -0.63
ALMS1P1-201ENST00000428767 UNC5AQ6ZN44 842 aa11.1□□□□□ -0.63
ALMS1P1-201ENST00000428767 Q6ZPB1 254 aaPredicted RBP11.1□□□□□ -0.63
ALMS1P1-201ENST00000428767 NLRP9Q7RTR0 991 aa11.1□□□□□ -0.63
ALMS1P1-201ENST00000428767 DNAAF3Q8N9W5 541 aa11.1□□□□□ -0.63
ALMS1P1-201ENST00000428767 KCTD6Q8NC69 237 aa11.1□□□□□ -0.63
ALMS1P1-201ENST00000428767 ACRBPQ8NEB7 543 aa11.1□□□□□ -0.63
ALMS1P1-201ENST00000428767 OR5AR1Q8NGP9 310 aa11.1□□□□□ -0.63
ALMS1P1-201ENST00000428767 FLVCR1-AS1Q8TAF5 88 aa11.1□□□□□ -0.63
ALMS1P1-201ENST00000428767 AGAP11Q8TF27 550 aa11.1□□□□□ -0.63
ALMS1P1-201ENST00000428767 LINC00615Q96LM1 132 aaPredicted RBP11.1□□□□□ -0.63
ALMS1P1-201ENST00000428767 SRPK1Q96SB4 655 aaKnown RBP11.1□□□□□ -0.63
ALMS1P1-201ENST00000428767 FOXC2Q99958 501 aa11.1□□□□□ -0.63
ALMS1P1-201ENST00000428767 ZNF559Q9BR84 538 aa11.1□□□□□ -0.63
ALMS1P1-201ENST00000428767 ZNF670Q9BS34 389 aa11.1□□□□□ -0.63
ALMS1P1-201ENST00000428767 TRABDQ9H4I3 376 aa11.1□□□□□ -0.63
ALMS1P1-201ENST00000428767 ASB8Q9H765 288 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 169.5 ms