RNA–Protein interactions for RNA: ENST00000428678.1

UPK3BP1-201, Transcript of uroplakin 3B pseudogene 1, humanhuman

BASIC

Gene UPK3BP1, Length 509 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BP1-201ENST00000428678 OR5K2Q8NHB8 316 aa17.59■□□□□ 0.41
UPK3BP1-201ENST00000428678 CCDC110Q8TBZ0 833 aa17.59■□□□□ 0.41
UPK3BP1-201ENST00000428678 LRRC45Q96CN5 670 aa17.59■□□□□ 0.41
UPK3BP1-201ENST00000428678 LHPPQ9H008 270 aa17.59■□□□□ 0.41
UPK3BP1-201ENST00000428678 FEZ2Q9UHY8 353 aaPredicted RBP17.59■□□□□ 0.41
UPK3BP1-201ENST00000428678 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.59■□□□□ 0.41
UPK3BP1-201ENST00000428678 HS3ST3B1Q9Y662 390 aa17.59■□□□□ 0.41
UPK3BP1-201ENST00000428678 H7C0S8 307 aa17.58■□□□□ 0.4
UPK3BP1-201ENST00000428678 KDM1AO60341 852 aa17.58■□□□□ 0.4
UPK3BP1-201ENST00000428678 AP2A1O95782 977 aa17.58■□□□□ 0.4
UPK3BP1-201ENST00000428678 FTH1P02794 183 aa17.58■□□□□ 0.4
UPK3BP1-201ENST00000428678 MAGP20916 626 aa17.58■□□□□ 0.4
UPK3BP1-201ENST00000428678 CTNNA2P26232 953 aa17.58■□□□□ 0.4
UPK3BP1-201ENST00000428678 ARSFP54793 590 aa17.58■□□□□ 0.4
UPK3BP1-201ENST00000428678 OTUD4Q01804 1114 aaKnown RBP17.58■□□□□ 0.4
UPK3BP1-201ENST00000428678 CACNG1Q06432 222 aa17.58■□□□□ 0.4
UPK3BP1-201ENST00000428678 RBBP7Q16576 425 aa17.58■□□□□ 0.4
UPK3BP1-201ENST00000428678 NKG7Q16617 165 aa17.58■□□□□ 0.4
UPK3BP1-201ENST00000428678 TUBB8Q3ZCM7 444 aa17.58■□□□□ 0.4
UPK3BP1-201ENST00000428678 KIRREL2Q6UWL6 708 aa17.58■□□□□ 0.4
UPK3BP1-201ENST00000428678 LINC00696Q6ZRV3 163 aa17.58■□□□□ 0.4
UPK3BP1-201ENST00000428678 TMTC1Q8IUR5 882 aa17.58■□□□□ 0.4
UPK3BP1-201ENST00000428678 MCATQ8IVS2 390 aaKnown RBP17.58■□□□□ 0.4
UPK3BP1-201ENST00000428678 MCEMP1Q8IX19 187 aa17.58■□□□□ 0.4
UPK3BP1-201ENST00000428678 ACTL9Q8TC94 416 aa17.58■□□□□ 0.4
UPK3BP1-201ENST00000428678 KRT35Q92764 455 aa17.58■□□□□ 0.4
UPK3BP1-201ENST00000428678 THOC3Q96J01 351 aaKnown RBP17.58■□□□□ 0.4
UPK3BP1-201ENST00000428678 PPP1R2P1Q96PQ5 205 aa17.58■□□□□ 0.4
UPK3BP1-201ENST00000428678 FAM118BQ9BPY3 351 aa17.58■□□□□ 0.4
UPK3BP1-201ENST00000428678 SOX17Q9H6I2 414 aaPredicted RBP17.58■□□□□ 0.4
UPK3BP1-201ENST00000428678 WDR54Q9H977 334 aa17.58■□□□□ 0.4
UPK3BP1-201ENST00000428678 ARNT2Q9HBZ2 717 aa17.58■□□□□ 0.4
UPK3BP1-201ENST00000428678 MRM3Q9HC36 420 aaKnown RBP17.58■□□□□ 0.4
UPK3BP1-201ENST00000428678 NLE1Q9NVX2 485 aaPredicted RBP17.58■□□□□ 0.4
UPK3BP1-201ENST00000428678 COPG2Q9UBF2 871 aa17.58■□□□□ 0.4
UPK3BP1-201ENST00000428678 PRSS21Q9Y6M0 314 aa17.58■□□□□ 0.4
UPK3BP1-201ENST00000428678 CSMD2Q7Z408 3487 aa17.57■□□□□ 0.4
UPK3BP1-201ENST00000428678 A0A1B0GUH1 482 aa17.57■□□□□ 0.4
UPK3BP1-201ENST00000428678 MFAP3LO75121 409 aa17.57■□□□□ 0.4
UPK3BP1-201ENST00000428678 ALBP02768 609 aa17.57■□□□□ 0.4
UPK3BP1-201ENST00000428678 STSP08842 583 aa17.57■□□□□ 0.4
UPK3BP1-201ENST00000428678 RBP3P10745 1247 aa17.57■□□□□ 0.4
UPK3BP1-201ENST00000428678 NSG1P42857 185 aa17.57■□□□□ 0.4
UPK3BP1-201ENST00000428678 EIF3EP60228 445 aaKnown RBP17.57■□□□□ 0.4
UPK3BP1-201ENST00000428678 DARS2Q6PI48 645 aaKnown RBP17.57■□□□□ 0.4
UPK3BP1-201ENST00000428678 DENND1AQ8TEH3 1009 aa17.57■□□□□ 0.4
UPK3BP1-201ENST00000428678 ZDHHC19Q8WVZ1 309 aaPredicted RBP17.57■□□□□ 0.4
UPK3BP1-201ENST00000428678 SPATA13Q96N96 652 aa17.57■□□□□ 0.4
UPK3BP1-201ENST00000428678 SPSB2Q99619 263 aa17.57■□□□□ 0.4
UPK3BP1-201ENST00000428678 SLX1AQ9BQ83 275 aa17.57■□□□□ 0.4
UPK3BP1-201ENST00000428678 RUBCNLQ9H714 662 aa17.57■□□□□ 0.4
UPK3BP1-201ENST00000428678 OLAHQ9NV23 265 aa17.57■□□□□ 0.4
UPK3BP1-201ENST00000428678 CTSFQ9UBX1 484 aa17.57■□□□□ 0.4
UPK3BP1-201ENST00000428678 PCNX1Q96RV3 2341 aa17.56■□□□□ 0.4
UPK3BP1-201ENST00000428678 BHMG1C9JSJ3 638 aaPredicted RBP17.56■□□□□ 0.4
UPK3BP1-201ENST00000428678 QSOX1O00391 747 aa17.56■□□□□ 0.4
UPK3BP1-201ENST00000428678 DSCR3O14972 297 aa17.56■□□□□ 0.4
UPK3BP1-201ENST00000428678 TPH1P17752 444 aa17.56■□□□□ 0.4
UPK3BP1-201ENST00000428678 PKLRP30613 574 aa17.56■□□□□ 0.4
UPK3BP1-201ENST00000428678 GCGRP47871 477 aa17.56■□□□□ 0.4
UPK3BP1-201ENST00000428678 CSE1LP55060 971 aaKnown RBP17.56■□□□□ 0.4
UPK3BP1-201ENST00000428678 HADHBP55084 474 aaKnown RBP17.56■□□□□ 0.4
UPK3BP1-201ENST00000428678 POU6F1Q14863 301 aa17.56■□□□□ 0.4
UPK3BP1-201ENST00000428678 FCRL6Q6DN72 434 aa17.56■□□□□ 0.4
UPK3BP1-201ENST00000428678 ISLR2Q6UXK2 745 aa17.56■□□□□ 0.4
UPK3BP1-201ENST00000428678 COX15Q7KZN9 410 aa17.56■□□□□ 0.4
UPK3BP1-201ENST00000428678 BCORP1Q8N888 145 aa17.56■□□□□ 0.4
UPK3BP1-201ENST00000428678 CDKN2AIPNLQ96HQ2 116 aa17.56■□□□□ 0.4
UPK3BP1-201ENST00000428678 VPS50Q96JG6 964 aa17.56■□□□□ 0.4
UPK3BP1-201ENST00000428678 MAGEB10Q96LZ2 347 aaPredicted RBP17.56■□□□□ 0.4
UPK3BP1-201ENST00000428678 ALS2CR12Q96Q35 445 aa17.56■□□□□ 0.4
UPK3BP1-201ENST00000428678 CUTCQ9NTM9 273 aa17.56■□□□□ 0.4
UPK3BP1-201ENST00000428678 IMPACTQ9P2X3 320 aa17.56■□□□□ 0.4
UPK3BP1-201ENST00000428678 NXT1Q9UKK6 140 aaKnown RBP17.56■□□□□ 0.4
UPK3BP1-201ENST00000428678 SLC5A10A0PJK1 596 aa17.55■□□□□ 0.4
UPK3BP1-201ENST00000428678 CBFA2T2O43439 604 aa17.55■□□□□ 0.4
UPK3BP1-201ENST00000428678 JRKO75564 520 aa17.55■□□□□ 0.4
UPK3BP1-201ENST00000428678 MCM3P25205 808 aa17.55■□□□□ 0.4
UPK3BP1-201ENST00000428678 RAB28P51157 221 aa17.55■□□□□ 0.4
UPK3BP1-201ENST00000428678 PLOD1Q02809 727 aaPredicted RBP17.55■□□□□ 0.4
UPK3BP1-201ENST00000428678 ITIH4Q14624 930 aa17.55■□□□□ 0.4
UPK3BP1-201ENST00000428678 TAX1BP1Q86VP1 789 aa17.55■□□□□ 0.4
UPK3BP1-201ENST00000428678 C2orf73Q8N5S3 287 aaPredicted RBP17.55■□□□□ 0.4
UPK3BP1-201ENST00000428678 METTL27Q8N6F8 245 aaPredicted RBP17.55■□□□□ 0.4
UPK3BP1-201ENST00000428678 LMNTD1Q8N9Z9 388 aa17.55■□□□□ 0.4
UPK3BP1-201ENST00000428678 CATSPER1Q8NEC5 780 aa17.55■□□□□ 0.4
UPK3BP1-201ENST00000428678 OR11G2Q8NGC1 345 aa17.55■□□□□ 0.4
UPK3BP1-201ENST00000428678 OR1N1Q8NGS0 311 aa17.55■□□□□ 0.4
UPK3BP1-201ENST00000428678 STYXQ8WUJ0 223 aa17.55■□□□□ 0.4
UPK3BP1-201ENST00000428678 SLC26A1Q9H2B4 701 aa17.55■□□□□ 0.4
UPK3BP1-201ENST00000428678 SEMA3GQ9NS98 782 aa17.55■□□□□ 0.4
UPK3BP1-201ENST00000428678 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.55■□□□□ 0.4
UPK3BP1-201ENST00000428678 CIDEBQ9UHD4 219 aa17.55■□□□□ 0.4
UPK3BP1-201ENST00000428678 HIVEP1P15822 2718 aa17.54■□□□□ 0.4
UPK3BP1-201ENST00000428678 OR51F1A6NGY5 319 aa17.54■□□□□ 0.4
UPK3BP1-201ENST00000428678 PJA2O43164 708 aa17.54■□□□□ 0.4
UPK3BP1-201ENST00000428678 ONECUT2O95948 504 aa17.54■□□□□ 0.4
UPK3BP1-201ENST00000428678 OR56A5P0C7T3 313 aa17.54■□□□□ 0.4
UPK3BP1-201ENST00000428678 MSNP26038 577 aaKnown RBP17.54■□□□□ 0.4
UPK3BP1-201ENST00000428678 GRIA3P42263 894 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms