RNA–Protein interactions for RNA: ENST00000428445.1

VARS-216, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 863 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-216ENST00000428445 AGPSO00116 658 aa15.9■□□□□ 0.14
VARS-216ENST00000428445 TJP3O95049 919 aa15.9■□□□□ 0.14
VARS-216ENST00000428445 ALPPP05187 535 aa15.9■□□□□ 0.14
VARS-216ENST00000428445 NSG1P42857 185 aa15.9■□□□□ 0.14
VARS-216ENST00000428445 SYTL3Q4VX76 610 aa15.9■□□□□ 0.14
VARS-216ENST00000428445 COX15Q7KZN9 410 aa15.9■□□□□ 0.14
VARS-216ENST00000428445 TMTC1Q8IUR5 882 aa15.9■□□□□ 0.14
VARS-216ENST00000428445 MCATQ8IVS2 390 aaKnown RBP15.9■□□□□ 0.14
VARS-216ENST00000428445 PARP9Q8IXQ6 854 aa15.9■□□□□ 0.14
VARS-216ENST00000428445 OR52K1Q8NGK4 314 aa15.9■□□□□ 0.14
VARS-216ENST00000428445 C17orf62Q9BQA9 187 aa15.9■□□□□ 0.14
VARS-216ENST00000428445 TMEM121Q9BTD3 319 aa15.9■□□□□ 0.14
VARS-216ENST00000428445 LACRTQ9GZZ8 138 aa15.9■□□□□ 0.14
VARS-216ENST00000428445 SOX17Q9H6I2 414 aaPredicted RBP15.9■□□□□ 0.14
VARS-216ENST00000428445 OR6C2Q9NZP2 312 aa15.9■□□□□ 0.14
VARS-216ENST00000428445 POLG2Q9UHN1 485 aa15.9■□□□□ 0.14
VARS-216ENST00000428445 CDC23Q9UJX2 597 aa15.9■□□□□ 0.14
VARS-216ENST00000428445 REXO2Q9Y3B8 237 aaKnown RBP15.9■□□□□ 0.14
VARS-216ENST00000428445 PCM1Q15154 2024 aa15.89■□□□□ 0.13
VARS-216ENST00000428445 KRT87PA6NCN2 255 aa15.89■□□□□ 0.13
VARS-216ENST00000428445 BTNL10A8MVZ5 291 aa15.89■□□□□ 0.13
VARS-216ENST00000428445 SOCS6O14544 535 aa15.89■□□□□ 0.13
VARS-216ENST00000428445 AP2A1O95782 977 aa15.89■□□□□ 0.13
VARS-216ENST00000428445 FTH1P02794 183 aa15.89■□□□□ 0.13
VARS-216ENST00000428445 CCR7P32248 378 aa15.89■□□□□ 0.13
VARS-216ENST00000428445 GRIA1P42261 906 aa15.89■□□□□ 0.13
VARS-216ENST00000428445 GCGRP47871 477 aa15.89■□□□□ 0.13
VARS-216ENST00000428445 OR1D4P47884 311 aa15.89■□□□□ 0.13
VARS-216ENST00000428445 ELOAQ14241 798 aaKnown RBP15.89■□□□□ 0.13
VARS-216ENST00000428445 SEMA3AQ14563 771 aa15.89■□□□□ 0.13
VARS-216ENST00000428445 SLC5A12Q1EHB4 618 aa15.89■□□□□ 0.13
VARS-216ENST00000428445 FCRL6Q6DN72 434 aa15.89■□□□□ 0.13
VARS-216ENST00000428445 PRUNE1Q86TP1 453 aa15.89■□□□□ 0.13
VARS-216ENST00000428445 LDB1Q86U70 411 aaPredicted RBP15.89■□□□□ 0.13
VARS-216ENST00000428445 KCNMB4Q86W47 210 aa15.89■□□□□ 0.13
VARS-216ENST00000428445 UBE2Q2Q8WVN8 375 aa15.89■□□□□ 0.13
VARS-216ENST00000428445 HDAC10Q969S8 669 aa15.89■□□□□ 0.13
VARS-216ENST00000428445 ZNF778Q96MU6 729 aa15.89■□□□□ 0.13
VARS-216ENST00000428445 ALS2CR12Q96Q35 445 aa15.89■□□□□ 0.13
VARS-216ENST00000428445 BARD1Q99728 777 aaKnown RBP15.89■□□□□ 0.13
VARS-216ENST00000428445 MENTQ9BUN1 341 aa15.89■□□□□ 0.13
VARS-216ENST00000428445 CHRNA10Q9GZZ6 450 aa15.89■□□□□ 0.13
VARS-216ENST00000428445 LRRC40Q9H9A6 602 aa15.89■□□□□ 0.13
VARS-216ENST00000428445 STOX2Q9P2F5 926 aaPredicted RBP15.89■□□□□ 0.13
VARS-216ENST00000428445 NOVA2Q9UNW9 492 aaKnown RBP15.89■□□□□ 0.13
VARS-216ENST00000428445 LRBAP50851 2863 aa15.88■□□□□ 0.13
VARS-216ENST00000428445 GRID2IPA4D2P6 1211 aa15.88■□□□□ 0.13
VARS-216ENST00000428445 QSOX1O00391 747 aa15.88■□□□□ 0.13
VARS-216ENST00000428445 MED26O95402 600 aa15.88■□□□□ 0.13
VARS-216ENST00000428445 GOT2P00505 430 aaKnown RBP15.88■□□□□ 0.13
VARS-216ENST00000428445 CD63P08962 238 aa15.88■□□□□ 0.13
VARS-216ENST00000428445 PKLRP30613 574 aa15.88■□□□□ 0.13
VARS-216ENST00000428445 SOX8P57073 446 aa15.88■□□□□ 0.13
VARS-216ENST00000428445 HSPA14Q0VDF9 509 aa15.88■□□□□ 0.13
VARS-216ENST00000428445 AIMP2Q13155 320 aaKnown RBP15.88■□□□□ 0.13
VARS-216ENST00000428445 GRB7Q14451 532 aa15.88■□□□□ 0.13
VARS-216ENST00000428445 ITIH4Q14624 930 aa15.88■□□□□ 0.13
VARS-216ENST00000428445 KIR2DS3Q14952 304 aa15.88■□□□□ 0.13
VARS-216ENST00000428445 NKG7Q16617 165 aa15.88■□□□□ 0.13
VARS-216ENST00000428445 PRAMEF13Q5VWM6 474 aa15.88■□□□□ 0.13
VARS-216ENST00000428445 KIRREL2Q6UWL6 708 aa15.88■□□□□ 0.13
VARS-216ENST00000428445 PACS1Q6VY07 963 aa15.88■□□□□ 0.13
VARS-216ENST00000428445 OVCH1Q7RTY7 1134 aa15.88■□□□□ 0.13
VARS-216ENST00000428445 SRRM1Q8IYB3 904 aaKnown RBP15.88■□□□□ 0.13
VARS-216ENST00000428445 KRT222Q8N1A0 295 aa15.88■□□□□ 0.13
VARS-216ENST00000428445 AMER2Q8N7J2 671 aa15.88■□□□□ 0.13
VARS-216ENST00000428445 TTC13Q8NBP0 860 aa15.88■□□□□ 0.13
VARS-216ENST00000428445 CATSPER1Q8NEC5 780 aa15.88■□□□□ 0.13
VARS-216ENST00000428445 OR13J1Q8NGT2 312 aa15.88■□□□□ 0.13
VARS-216ENST00000428445 DNAJB14Q8TBM8 379 aa15.88■□□□□ 0.13
VARS-216ENST00000428445 CNDP1Q96KN2 507 aa15.88■□□□□ 0.13
VARS-216ENST00000428445 TRIM5Q9C035 493 aa15.88■□□□□ 0.13
VARS-216ENST00000428445 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.88■□□□□ 0.13
VARS-216ENST00000428445 CTSFQ9UBX1 484 aa15.88■□□□□ 0.13
VARS-216ENST00000428445 SRPK3Q9UPE1 567 aa15.88■□□□□ 0.13
VARS-216ENST00000428445 OSGIN2Q9Y236 505 aa15.88■□□□□ 0.13
VARS-216ENST00000428445 HS3ST3B1Q9Y662 390 aa15.88■□□□□ 0.13
VARS-216ENST00000428445 EPN1Q9Y6I3 576 aaPredicted RBP15.88■□□□□ 0.13
VARS-216ENST00000428445 MAU2Q9Y6X3 613 aa15.88■□□□□ 0.13
VARS-216ENST00000428445 POLEQ07864 2286 aa15.88■□□□□ 0.13
VARS-216ENST00000428445 CSMD1Q96PZ7 3565 aa15.87■□□□□ 0.13
VARS-216ENST00000428445 A0A0U1RQJ8 604 aa15.87■□□□□ 0.13
VARS-216ENST00000428445 PSMD3O43242 534 aa15.87■□□□□ 0.13
VARS-216ENST00000428445 LRRTM2O43300 516 aa15.87■□□□□ 0.13
VARS-216ENST00000428445 NRP2O60462 931 aa15.87■□□□□ 0.13
VARS-216ENST00000428445 IPO13O94829 963 aaKnown RBP15.87■□□□□ 0.13
VARS-216ENST00000428445 IPO7O95373 1038 aaKnown RBP15.87■□□□□ 0.13
VARS-216ENST00000428445 OR56A5P0C7T3 313 aa15.87■□□□□ 0.13
VARS-216ENST00000428445 MMP11P24347 488 aa15.87■□□□□ 0.13
VARS-216ENST00000428445 PSMA3P25788 255 aa15.87■□□□□ 0.13
VARS-216ENST00000428445 PLOD1Q02809 727 aaPredicted RBP15.87■□□□□ 0.13
VARS-216ENST00000428445 Q0VFX4 171 aa15.87■□□□□ 0.13
VARS-216ENST00000428445 C1QL3Q5VWW1 255 aa15.87■□□□□ 0.13
VARS-216ENST00000428445 FIGLAQ6QHK4 219 aa15.87■□□□□ 0.13
VARS-216ENST00000428445 LRRC57Q8N9N7 239 aa15.87■□□□□ 0.13
VARS-216ENST00000428445 ACRBPQ8NEB7 543 aa15.87■□□□□ 0.13
VARS-216ENST00000428445 GRHL3Q8TE85 626 aa15.87■□□□□ 0.13
VARS-216ENST00000428445 PANX2Q96RD6 677 aa15.87■□□□□ 0.13
VARS-216ENST00000428445 SPSB2Q99619 263 aa15.87■□□□□ 0.13
VARS-216ENST00000428445 WDR77Q9BQA1 342 aaPredicted RBP15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms