RNA–Protein interactions for RNA: ENST00000427755.2

DEPDC7-203, Transcript of DEP domain containing 7, humanhuman

TSL 2

Gene DEPDC7, Length 1,212 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC7-203ENST00000427755 EIF2S3LQ2VIR3 472 aaKnown RBP12.55□□□□□ -0.4
DEPDC7-203ENST00000427755 C4orf17Q53FE4 359 aa12.55□□□□□ -0.4
DEPDC7-203ENST00000427755 CRB2Q5IJ48 1285 aa12.55□□□□□ -0.4
DEPDC7-203ENST00000427755 IGFL3Q6UXB1 125 aa12.55□□□□□ -0.4
DEPDC7-203ENST00000427755 PPP1R21Q6ZMI0 780 aa12.55□□□□□ -0.4
DEPDC7-203ENST00000427755 MCATQ8IVS2 390 aaKnown RBP12.55□□□□□ -0.4
DEPDC7-203ENST00000427755 GALNT16Q8N428 558 aa12.55□□□□□ -0.4
DEPDC7-203ENST00000427755 CLEC1AQ8NC01 280 aa12.55□□□□□ -0.4
DEPDC7-203ENST00000427755 PEX13Q92968 403 aa12.55□□□□□ -0.4
DEPDC7-203ENST00000427755 PTERQ96BW5 349 aa12.55□□□□□ -0.4
DEPDC7-203ENST00000427755 SNRNP40Q96DI7 357 aaKnown RBP12.55□□□□□ -0.4
DEPDC7-203ENST00000427755 IL17FQ96PD4 163 aa12.55□□□□□ -0.4
DEPDC7-203ENST00000427755 TTC1Q99614 292 aa12.55□□□□□ -0.4
DEPDC7-203ENST00000427755 CARD6Q9BX69 1037 aa12.55□□□□□ -0.4
DEPDC7-203ENST00000427755 ENAMQ9NRM1 1142 aa12.55□□□□□ -0.4
DEPDC7-203ENST00000427755 TXLNGQ9NUQ3 528 aa12.55□□□□□ -0.4
DEPDC7-203ENST00000427755 CUEDC1Q9NWM3 386 aaPredicted RBP12.55□□□□□ -0.4
DEPDC7-203ENST00000427755 MARCH4Q9P2E8 410 aaPredicted RBP12.55□□□□□ -0.4
DEPDC7-203ENST00000427755 NDOR1Q9UHB4 597 aa12.55□□□□□ -0.4
DEPDC7-203ENST00000427755 CIDEBQ9UHD4 219 aa12.55□□□□□ -0.4
DEPDC7-203ENST00000427755 GPN3Q9UHW5 284 aaPredicted RBP12.55□□□□□ -0.4
DEPDC7-203ENST00000427755 SPTAN1Q13813 2472 aaKnown RBP12.54□□□□□ -0.4
DEPDC7-203ENST00000427755 F8W8V4 182 aa12.54□□□□□ -0.4
DEPDC7-203ENST00000427755 PEX12O00623 359 aa12.54□□□□□ -0.4
DEPDC7-203ENST00000427755 KDM1AO60341 852 aa12.54□□□□□ -0.4
DEPDC7-203ENST00000427755 SLCO2B1O94956 709 aa12.54□□□□□ -0.4
DEPDC7-203ENST00000427755 GAS8O95995 478 aa12.54□□□□□ -0.4
DEPDC7-203ENST00000427755 IGHEP01854 428 aa12.54□□□□□ -0.4
DEPDC7-203ENST00000427755 VARSP26640 1264 aaKnown RBP12.54□□□□□ -0.4
DEPDC7-203ENST00000427755 AOAHP28039 575 aa12.54□□□□□ -0.4
DEPDC7-203ENST00000427755 FASTKD1Q53R41 847 aaKnown RBP12.54□□□□□ -0.4
DEPDC7-203ENST00000427755 FCRL6Q6DN72 434 aa12.54□□□□□ -0.4
DEPDC7-203ENST00000427755 UNC5DQ6UXZ4 953 aa12.54□□□□□ -0.4
DEPDC7-203ENST00000427755 LDB1Q86U70 411 aaPredicted RBP12.54□□□□□ -0.4
DEPDC7-203ENST00000427755 SLC13A5Q86YT5 568 aaPredicted RBP12.54□□□□□ -0.4
DEPDC7-203ENST00000427755 DCUN1D3Q8IWE4 304 aa12.54□□□□□ -0.4
DEPDC7-203ENST00000427755 KRT222Q8N1A0 295 aa12.54□□□□□ -0.4
DEPDC7-203ENST00000427755 C2orf73Q8N5S3 287 aaPredicted RBP12.54□□□□□ -0.4
DEPDC7-203ENST00000427755 OR6P1Q8NGX9 317 aa12.54□□□□□ -0.4
DEPDC7-203ENST00000427755 C1orf54Q8WWF1 131 aa12.54□□□□□ -0.4
DEPDC7-203ENST00000427755 ASZ1Q8WWH4 475 aa12.54□□□□□ -0.4
DEPDC7-203ENST00000427755 INPP5DQ92835 1189 aa12.54□□□□□ -0.4
DEPDC7-203ENST00000427755 ZNF285Q96NJ3 590 aa12.54□□□□□ -0.4
DEPDC7-203ENST00000427755 NDC1Q9BTX1 674 aa12.54□□□□□ -0.4
DEPDC7-203ENST00000427755 FRMD8P1Q9BZ68 369 aaPredicted RBP12.54□□□□□ -0.4
DEPDC7-203ENST00000427755 ZBTB20Q9HC78 741 aaPredicted RBP12.54□□□□□ -0.4
DEPDC7-203ENST00000427755 RAB6BQ9NRW1 208 aa12.54□□□□□ -0.4
DEPDC7-203ENST00000427755 PLSCR2Q9NRY7 297 aa12.54□□□□□ -0.4
DEPDC7-203ENST00000427755 B3GNT3Q9Y2A9 372 aa12.54□□□□□ -0.4
DEPDC7-203ENST00000427755 SEC16AO15027 2179 aa12.54□□□□□ -0.4
DEPDC7-203ENST00000427755 A0A1B0GX78 115 aa12.53□□□□□ -0.4
DEPDC7-203ENST00000427755 AGPSO00116 658 aa12.53□□□□□ -0.4
DEPDC7-203ENST00000427755 PRMT5O14744 637 aaPredicted RBP12.53□□□□□ -0.4
DEPDC7-203ENST00000427755 PRICKLE3O43900 615 aaPredicted RBP12.53□□□□□ -0.4
DEPDC7-203ENST00000427755 CBX6O95503 412 aa12.53□□□□□ -0.4
DEPDC7-203ENST00000427755 S1PR4O95977 384 aa12.53□□□□□ -0.4
DEPDC7-203ENST00000427755 ZSCAN5DPP0CG00 497 aa12.53□□□□□ -0.4
DEPDC7-203ENST00000427755 MCM3P25205 808 aa12.53□□□□□ -0.4
DEPDC7-203ENST00000427755 PRAMEP78395 509 aa12.53□□□□□ -0.4
DEPDC7-203ENST00000427755 TTLL10Q6ZVT0 673 aa12.53□□□□□ -0.4
DEPDC7-203ENST00000427755 COX15Q7KZN9 410 aa12.53□□□□□ -0.4
DEPDC7-203ENST00000427755 NLRP9Q7RTR0 991 aa12.53□□□□□ -0.4
DEPDC7-203ENST00000427755 TAX1BP1Q86VP1 789 aa12.53□□□□□ -0.4
DEPDC7-203ENST00000427755 GAS2L3Q86XJ1 694 aa12.53□□□□□ -0.4
DEPDC7-203ENST00000427755 IQCKQ8N0W5 287 aa12.53□□□□□ -0.4
DEPDC7-203ENST00000427755 TXLNBQ8N3L3 684 aa12.53□□□□□ -0.4
DEPDC7-203ENST00000427755 RNF10Q8N5U6 811 aaKnown RBP12.53□□□□□ -0.4
DEPDC7-203ENST00000427755 OR2L8Q8NGY9 312 aa12.53□□□□□ -0.4
DEPDC7-203ENST00000427755 CFAP61Q8NHU2 1237 aa12.53□□□□□ -0.4
DEPDC7-203ENST00000427755 DLG3Q92796 817 aa12.53□□□□□ -0.4
DEPDC7-203ENST00000427755 FKBP10Q96AY3 582 aa12.53□□□□□ -0.4
DEPDC7-203ENST00000427755 NACC2Q96BF6 587 aa12.53□□□□□ -0.4
DEPDC7-203ENST00000427755 SLC22A18Q96BI1 424 aa12.53□□□□□ -0.4
DEPDC7-203ENST00000427755 SPSB2Q99619 263 aa12.53□□□□□ -0.4
DEPDC7-203ENST00000427755 BARD1Q99728 777 aaKnown RBP12.53□□□□□ -0.4
DEPDC7-203ENST00000427755 SLC29A3Q9BZD2 475 aa12.53□□□□□ -0.4
DEPDC7-203ENST00000427755 CHRAC1Q9NRG0 131 aa12.53□□□□□ -0.4
DEPDC7-203ENST00000427755 TREX1Q9NSU2 369 aa12.53□□□□□ -0.4
DEPDC7-203ENST00000427755 ASF1BQ9NVP2 202 aa12.53□□□□□ -0.4
DEPDC7-203ENST00000427755 IRAK4Q9NWZ3 460 aa12.53□□□□□ -0.4
DEPDC7-203ENST00000427755 ZNF148Q9UQR1 794 aa12.53□□□□□ -0.4
DEPDC7-203ENST00000427755 SHANK1Q9Y566 2161 aa12.53□□□□□ -0.4
DEPDC7-203ENST00000427755 WIPF3A6NGB9 483 aa12.52□□□□□ -0.41
DEPDC7-203ENST00000427755 E7EVH7 732 aa12.52□□□□□ -0.41
DEPDC7-203ENST00000427755 RASGRF2O14827 1237 aa12.52□□□□□ -0.41
DEPDC7-203ENST00000427755 RPN2P04844 631 aa12.52□□□□□ -0.41
DEPDC7-203ENST00000427755 ALPPP05187 535 aa12.52□□□□□ -0.41
DEPDC7-203ENST00000427755 APOA4P06727 396 aa12.52□□□□□ -0.41
DEPDC7-203ENST00000427755 APRTP07741 180 aa12.52□□□□□ -0.41
DEPDC7-203ENST00000427755 ALAS2P22557 587 aa12.52□□□□□ -0.41
DEPDC7-203ENST00000427755 MMP11P24347 488 aa12.52□□□□□ -0.41
DEPDC7-203ENST00000427755 RPL22P35268 128 aaKnown RBP12.52□□□□□ -0.41
DEPDC7-203ENST00000427755 PPARGP37231 505 aaPredicted RBP12.52□□□□□ -0.41
DEPDC7-203ENST00000427755 GRIA3P42263 894 aa12.52□□□□□ -0.41
DEPDC7-203ENST00000427755 ARSFP54793 590 aa12.52□□□□□ -0.41
DEPDC7-203ENST00000427755 SNX1Q13596 522 aa12.52□□□□□ -0.41
DEPDC7-203ENST00000427755 NR6A1Q15406 480 aa12.52□□□□□ -0.41
DEPDC7-203ENST00000427755 SIX1Q15475 284 aaPredicted RBP12.52□□□□□ -0.41
DEPDC7-203ENST00000427755 CYP2A13Q16696 494 aa12.52□□□□□ -0.41
DEPDC7-203ENST00000427755 AARS2Q5JTZ9 985 aaKnown RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms