RNA–Protein interactions for RNA: ENST00000427722.2

RFX3-AS1-202, RFX3 antisense RNA 1, humanhuman

TSL 5 BASIC

Gene RFX3-AS1, Length 1,088 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-AS1-202ENST00000427722 CENPUQ71F23 418 aa8.91□□□□□ -0.98
RFX3-AS1-202ENST00000427722 TMEM135Q86UB9 458 aa8.91□□□□□ -0.98
RFX3-AS1-202ENST00000427722 CREG2Q8IUH2 290 aa8.91□□□□□ -0.98
RFX3-AS1-202ENST00000427722 FAM20CQ8IXL6 584 aa8.91□□□□□ -0.98
RFX3-AS1-202ENST00000427722 C17orf53Q8N3J3 647 aaPredicted RBP8.91□□□□□ -0.98
RFX3-AS1-202ENST00000427722 C2orf73Q8N5S3 287 aaPredicted RBP8.91□□□□□ -0.98
RFX3-AS1-202ENST00000427722 ZBTB2Q8N680 514 aa8.91□□□□□ -0.98
RFX3-AS1-202ENST00000427722 LMNTD1Q8N9Z9 388 aa8.91□□□□□ -0.98
RFX3-AS1-202ENST00000427722 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.91□□□□□ -0.98
RFX3-AS1-202ENST00000427722 LSM14AQ8ND56 463 aaKnown RBP8.91□□□□□ -0.98
RFX3-AS1-202ENST00000427722 CT55Q8WUE5 264 aa8.91□□□□□ -0.98
RFX3-AS1-202ENST00000427722 SLCO2A1Q92959 643 aa8.91□□□□□ -0.98
RFX3-AS1-202ENST00000427722 BIRC8Q96P09 236 aa8.91□□□□□ -0.98
RFX3-AS1-202ENST00000427722 TRAPPC9Q96Q05 1148 aa8.91□□□□□ -0.98
RFX3-AS1-202ENST00000427722 OR2A14Q96R47 310 aa8.91□□□□□ -0.98
RFX3-AS1-202ENST00000427722 TCF12Q99081 682 aa8.91□□□□□ -0.98
RFX3-AS1-202ENST00000427722 TRIM51Q9BSJ1 452 aa8.91□□□□□ -0.98
RFX3-AS1-202ENST00000427722 LHX9Q9NQ69 397 aa8.91□□□□□ -0.98
RFX3-AS1-202ENST00000427722 FBXO6Q9NRD1 293 aaPredicted RBP8.91□□□□□ -0.98
RFX3-AS1-202ENST00000427722 KCND1Q9NSA2 647 aa8.91□□□□□ -0.98
RFX3-AS1-202ENST00000427722 SLC39A10Q9ULF5 831 aa8.91□□□□□ -0.98
RFX3-AS1-202ENST00000427722 NFS1Q9Y697 457 aa8.91□□□□□ -0.98
RFX3-AS1-202ENST00000427722 SAR1BQ9Y6B6 198 aa8.91□□□□□ -0.98
RFX3-AS1-202ENST00000427722 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.91□□□□□ -0.98
RFX3-AS1-202ENST00000427722 ZFC3H1O60293 1989 aaKnown RBP8.9□□□□□ -0.98
RFX3-AS1-202ENST00000427722 A0A0J9YY10 115 aa8.9□□□□□ -0.98
RFX3-AS1-202ENST00000427722 MAGEB16A2A368 324 aa8.9□□□□□ -0.98
RFX3-AS1-202ENST00000427722 KPNA5O15131 536 aa8.9□□□□□ -0.98
RFX3-AS1-202ENST00000427722 USP1O94782 785 aa8.9□□□□□ -0.98
RFX3-AS1-202ENST00000427722 MT-ND3P03897 115 aa8.9□□□□□ -0.98
RFX3-AS1-202ENST00000427722 PKMP14618 531 aaKnown RBP8.9□□□□□ -0.98
RFX3-AS1-202ENST00000427722 CHRM3P20309 590 aa8.9□□□□□ -0.98
RFX3-AS1-202ENST00000427722 CYP2A7P20853 494 aa8.9□□□□□ -0.98
RFX3-AS1-202ENST00000427722 OAS2P29728 719 aaKnown RBP8.9□□□□□ -0.98
RFX3-AS1-202ENST00000427722 PTGIRP43119 386 aa8.9□□□□□ -0.98
RFX3-AS1-202ENST00000427722 ADARP55265 1226 aaKnown RBP8.9□□□□□ -0.98
RFX3-AS1-202ENST00000427722 GPS2Q13227 327 aa8.9□□□□□ -0.98
RFX3-AS1-202ENST00000427722 CTBP1Q13363 440 aa8.9□□□□□ -0.98
RFX3-AS1-202ENST00000427722 DNASE1L3Q13609 305 aa8.9□□□□□ -0.98
RFX3-AS1-202ENST00000427722 CRYMQ14894 314 aa8.9□□□□□ -0.98
RFX3-AS1-202ENST00000427722 KIR2DS3Q14952 304 aa8.9□□□□□ -0.98
RFX3-AS1-202ENST00000427722 ZIC1Q15915 447 aa8.9□□□□□ -0.98
RFX3-AS1-202ENST00000427722 KYNUQ16719 465 aa8.9□□□□□ -0.98
RFX3-AS1-202ENST00000427722 LONRF1Q17RB8 773 aa8.9□□□□□ -0.98
RFX3-AS1-202ENST00000427722 LINC00303Q3SY05 128 aa8.9□□□□□ -0.98
RFX3-AS1-202ENST00000427722 BBS9Q3SYG4 887 aa8.9□□□□□ -0.98
RFX3-AS1-202ENST00000427722 PLEKHS1Q5SXH7 462 aa8.9□□□□□ -0.98
RFX3-AS1-202ENST00000427722 LINC01555Q8NAE3 123 aa8.9□□□□□ -0.98
RFX3-AS1-202ENST00000427722 OR8K5Q8NH50 307 aa8.9□□□□□ -0.98
RFX3-AS1-202ENST00000427722 OR1L3Q8NH93 324 aa8.9□□□□□ -0.98
RFX3-AS1-202ENST00000427722 N4BP2L2Q92802 583 aaPredicted RBP8.9□□□□□ -0.98
RFX3-AS1-202ENST00000427722 MR1Q95460 341 aa8.9□□□□□ -0.98
RFX3-AS1-202ENST00000427722 ZNF501Q96CX3 271 aaPredicted RBP8.9□□□□□ -0.98
RFX3-AS1-202ENST00000427722 MED8Q96G25 268 aa8.9□□□□□ -0.98
RFX3-AS1-202ENST00000427722 WBP1Q96G27 269 aa8.9□□□□□ -0.98
RFX3-AS1-202ENST00000427722 SIGLEC10Q96LC7 697 aa8.9□□□□□ -0.98
RFX3-AS1-202ENST00000427722 FOPNLQ96NB1 174 aa8.9□□□□□ -0.98
RFX3-AS1-202ENST00000427722 RUNDC3BQ96NL0 473 aa8.9□□□□□ -0.98
RFX3-AS1-202ENST00000427722 FCRL4Q96PJ5 515 aa8.9□□□□□ -0.98
RFX3-AS1-202ENST00000427722 RUFY1Q96T51 708 aa8.9□□□□□ -0.98
RFX3-AS1-202ENST00000427722 FAM167BQ9BTA0 163 aa8.9□□□□□ -0.98
RFX3-AS1-202ENST00000427722 MENTQ9BUN1 341 aa8.9□□□□□ -0.98
RFX3-AS1-202ENST00000427722 RAB11FIP5Q9BXF6 653 aa8.9□□□□□ -0.98
RFX3-AS1-202ENST00000427722 CCDC68Q9H2F9 335 aa8.9□□□□□ -0.98
RFX3-AS1-202ENST00000427722 INTS10Q9NVR2 710 aaKnown RBP8.9□□□□□ -0.98
RFX3-AS1-202ENST00000427722 IRAK4Q9NWZ3 460 aa8.9□□□□□ -0.98
RFX3-AS1-202ENST00000427722 PCYOX1Q9UHG3 505 aa8.9□□□□□ -0.98
RFX3-AS1-202ENST00000427722 PADI1Q9ULC6 663 aa8.9□□□□□ -0.98
RFX3-AS1-202ENST00000427722 NBEAQ8NFP9 2946 aa8.9□□□□□ -0.99
RFX3-AS1-202ENST00000427722 MGAQ8IWI9 3026 aa8.89□□□□□ -0.99
RFX3-AS1-202ENST00000427722 SDK2Q58EX2 2172 aa8.89□□□□□ -0.99
RFX3-AS1-202ENST00000427722 ATRXP46100 2492 aa8.89□□□□□ -0.99
RFX3-AS1-202ENST00000427722 C21orf140B9A014 251 aa8.89□□□□□ -0.99
RFX3-AS1-202ENST00000427722 RASGRF2O14827 1237 aa8.89□□□□□ -0.99
RFX3-AS1-202ENST00000427722 TTI1O43156 1089 aa8.89□□□□□ -0.99
RFX3-AS1-202ENST00000427722 C1orf105O95561 183 aa8.89□□□□□ -0.99
RFX3-AS1-202ENST00000427722 TCN2P20062 427 aa8.89□□□□□ -0.99
RFX3-AS1-202ENST00000427722 MAGP20916 626 aa8.89□□□□□ -0.99
RFX3-AS1-202ENST00000427722 CD9P21926 228 aa8.89□□□□□ -0.99
RFX3-AS1-202ENST00000427722 ATP5DP30049 168 aa8.89□□□□□ -0.99
RFX3-AS1-202ENST00000427722 PAFAH1B1P43034 410 aa8.89□□□□□ -0.99
RFX3-AS1-202ENST00000427722 ITGA1P56199 1179 aa8.89□□□□□ -0.99
RFX3-AS1-202ENST00000427722 MC1RQ01726 317 aa8.89□□□□□ -0.99
RFX3-AS1-202ENST00000427722 DHX9Q08211 1270 aaKnown RBP8.89□□□□□ -0.99
RFX3-AS1-202ENST00000427722 C19orf57Q0VDD7 668 aa8.89□□□□□ -0.99
RFX3-AS1-202ENST00000427722 CUL1Q13616 776 aa8.89□□□□□ -0.99
RFX3-AS1-202ENST00000427722 GRB7Q14451 532 aa8.89□□□□□ -0.99
RFX3-AS1-202ENST00000427722 GBX1Q14549 363 aa8.89□□□□□ -0.99
RFX3-AS1-202ENST00000427722 MORF4L2Q15014 288 aa8.89□□□□□ -0.99
RFX3-AS1-202ENST00000427722 SLC5A12Q1EHB4 618 aa8.89□□□□□ -0.99
RFX3-AS1-202ENST00000427722 TTLL9Q3SXZ7 439 aa8.89□□□□□ -0.99
RFX3-AS1-202ENST00000427722 CCSMST1Q4G0I0 132 aa8.89□□□□□ -0.99
RFX3-AS1-202ENST00000427722 HSP90AA5PQ58FG0 334 aa8.89□□□□□ -0.99
RFX3-AS1-202ENST00000427722 ACSBG2Q5FVE4 666 aa8.89□□□□□ -0.99
RFX3-AS1-202ENST00000427722 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.89□□□□□ -0.99
RFX3-AS1-202ENST00000427722 HP1BP3Q5SSJ5 553 aaPredicted RBP8.89□□□□□ -0.99
RFX3-AS1-202ENST00000427722 TTC23LQ6PF05 361 aa8.89□□□□□ -0.99
RFX3-AS1-202ENST00000427722 BORAQ6PGQ7 559 aa8.89□□□□□ -0.99
RFX3-AS1-202ENST00000427722 SYDE1Q6ZW31 735 aaPredicted RBP8.89□□□□□ -0.99
RFX3-AS1-202ENST00000427722 PCGF5Q86SE9 256 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms