RNA–Protein interactions for RNA: ENST00000426059.1

FN1-208, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 2,388 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-208ENST00000426059 NR6A1Q15406 480 aa16.86■□□□□ 0.29
FN1-208ENST00000426059 C6orf136Q5SQH8 315 aa16.86■□□□□ 0.29
FN1-208ENST00000426059 EFL1Q7Z2Z2 1120 aaKnown RBP16.86■□□□□ 0.29
FN1-208ENST00000426059 RD3Q7Z3Z2 195 aa16.86■□□□□ 0.29
FN1-208ENST00000426059 PDZD3Q86UT5 571 aa16.86■□□□□ 0.29
FN1-208ENST00000426059 OXR1Q8N573 874 aa16.86■□□□□ 0.29
FN1-208ENST00000426059 FNDC5Q8NAU1 212 aa16.86■□□□□ 0.29
FN1-208ENST00000426059 RP9Q8TA86 221 aaKnown RBP16.86■□□□□ 0.29
FN1-208ENST00000426059 FBXL21Q9UKT6 434 aa16.86■□□□□ 0.29
FN1-208ENST00000426059 SLC17A4Q9Y2C5 497 aa16.86■□□□□ 0.29
FN1-208ENST00000426059 LRRC72A6NJI9 287 aa16.86■□□□□ 0.29
FN1-208ENST00000426059 ULK1O75385 1050 aa16.86■□□□□ 0.29
FN1-208ENST00000426059 PRR35P0CG20 571 aa16.86■□□□□ 0.29
FN1-208ENST00000426059 CD22P20273 847 aa16.86■□□□□ 0.29
FN1-208ENST00000426059 ITGAXP20702 1163 aa16.86■□□□□ 0.29
FN1-208ENST00000426059 GPX3P22352 226 aa16.86■□□□□ 0.29
FN1-208ENST00000426059 PRDX6P30041 224 aa16.86■□□□□ 0.29
FN1-208ENST00000426059 HABP4Q5JVS0 413 aaKnown RBP16.86■□□□□ 0.29
FN1-208ENST00000426059 ENPP7Q6UWV6 458 aa16.86■□□□□ 0.29
FN1-208ENST00000426059 UHRF1Q96T88 793 aaPredicted RBP16.86■□□□□ 0.29
FN1-208ENST00000426059 USP36Q9P275 1121 aaKnown RBP16.86■□□□□ 0.29
FN1-208ENST00000426059 TRPS1Q9UHF7 1281 aa16.86■□□□□ 0.29
FN1-208ENST00000426059 PACSIN3Q9UKS6 424 aa16.86■□□□□ 0.29
FN1-208ENST00000426059 FAM170BA6NMN3 283 aa16.85■□□□□ 0.29
FN1-208ENST00000426059 MANBAO00462 879 aa16.85■□□□□ 0.29
FN1-208ENST00000426059 SORBS2O94875 1100 aaKnown RBP16.85■□□□□ 0.29
FN1-208ENST00000426059 PDYNP01213 254 aa16.85■□□□□ 0.29
FN1-208ENST00000426059 DGKEP52429 567 aa16.85■□□□□ 0.29
FN1-208ENST00000426059 TBPL1P62380 186 aa16.85■□□□□ 0.29
FN1-208ENST00000426059 PLOD1Q02809 727 aaPredicted RBP16.85■□□□□ 0.29
FN1-208ENST00000426059 CDC16Q13042 620 aa16.85■□□□□ 0.29
FN1-208ENST00000426059 PTK2BQ14289 1009 aa16.85■□□□□ 0.29
FN1-208ENST00000426059 ATP6AP1LQ52LC2 224 aa16.85■□□□□ 0.29
FN1-208ENST00000426059 RFTN2Q52LD8 501 aaPredicted RBP16.85■□□□□ 0.29
FN1-208ENST00000426059 PYCR3Q53H96 274 aa16.85■□□□□ 0.29
FN1-208ENST00000426059 SYT13Q7L8C5 426 aa16.85■□□□□ 0.29
FN1-208ENST00000426059 GALNT13Q8IUC8 556 aa16.85■□□□□ 0.29
FN1-208ENST00000426059 FUNDC1Q8IVP5 155 aa16.85■□□□□ 0.29
FN1-208ENST00000426059 SIX5Q8N196 739 aa16.85■□□□□ 0.29
FN1-208ENST00000426059 OR9A1PQ8NGU1 263 aa16.85■□□□□ 0.29
FN1-208ENST00000426059 NUDT8Q8WV74 236 aa16.85■□□□□ 0.29
FN1-208ENST00000426059 ATL1Q8WXF7 558 aa16.85■□□□□ 0.29
FN1-208ENST00000426059 PDXPQ96GD0 296 aa16.85■□□□□ 0.29
FN1-208ENST00000426059 TOE1Q96GM8 510 aaKnown RBP16.85■□□□□ 0.29
FN1-208ENST00000426059 TEX37Q96LM6 180 aa16.85■□□□□ 0.29
FN1-208ENST00000426059 PNMA8BQ9ULN7 279 aaPredicted RBP16.85■□□□□ 0.29
FN1-208ENST00000426059 SH2B3Q9UQQ2 575 aa16.85■□□□□ 0.29
FN1-208ENST00000426059 FPGTO14772 594 aa16.85■□□□□ 0.29
FN1-208ENST00000426059 LSM1O15116 133 aaKnown RBP16.85■□□□□ 0.29
FN1-208ENST00000426059 MNAT1P51948 309 aa16.85■□□□□ 0.29
FN1-208ENST00000426059 STX1BP61266 288 aa16.85■□□□□ 0.29
FN1-208ENST00000426059 ZRSR2Q15696 482 aaKnown RBP16.85■□□□□ 0.29
FN1-208ENST00000426059 XKR6Q5GH73 641 aa16.85■□□□□ 0.29
FN1-208ENST00000426059 TRIM69Q86WT6 500 aa16.85■□□□□ 0.29
FN1-208ENST00000426059 DEFB107AQ8IZN7 70 aa16.85■□□□□ 0.29
FN1-208ENST00000426059 OR56A3Q8NH54 315 aa16.85■□□□□ 0.29
FN1-208ENST00000426059 TSACCQ96A04 125 aaPredicted RBP16.85■□□□□ 0.29
FN1-208ENST00000426059 RTKNQ9BST9 563 aa16.85■□□□□ 0.29
FN1-208ENST00000426059 C1orf21Q9H246 121 aa16.85■□□□□ 0.29
FN1-208ENST00000426059 CARS2Q9HA77 564 aaKnown RBP16.85■□□□□ 0.29
FN1-208ENST00000426059 RIC8BQ9NVN3 520 aa16.85■□□□□ 0.29
FN1-208ENST00000426059 CCL27Q9Y4X3 112 aa16.85■□□□□ 0.29
FN1-208ENST00000426059 KCNE1BA0A087WTH5 132 aa16.84■□□□□ 0.29
FN1-208ENST00000426059 C7P10643 843 aa16.84■□□□□ 0.29
FN1-208ENST00000426059 HNRNPA2B1P22626 353 aaKnown RBP16.84■□□□□ 0.29
FN1-208ENST00000426059 ADSLP30566 484 aaPredicted RBP16.84■□□□□ 0.29
FN1-208ENST00000426059 ERFP50548 548 aa16.84■□□□□ 0.29
FN1-208ENST00000426059 IRF8Q02556 426 aa16.84■□□□□ 0.29
FN1-208ENST00000426059 SFSWAPQ12872 951 aaKnown RBP16.84■□□□□ 0.29
FN1-208ENST00000426059 RPS6KA2Q15349 733 aa16.84■□□□□ 0.29
FN1-208ENST00000426059 AP5B1Q2VPB7 878 aa16.84■□□□□ 0.29
FN1-208ENST00000426059 LTB4R2Q9NPC1 389 aa16.84■□□□□ 0.29
FN1-208ENST00000426059 PCM1Q15154 2024 aa16.84■□□□□ 0.29
FN1-208ENST00000426059 PRAMEF33A0A0G2JMD5 474 aa16.84■□□□□ 0.29
FN1-208ENST00000426059 KANSL1LA0AUZ9 987 aa16.84■□□□□ 0.29
FN1-208ENST00000426059 PRSS38A1L453 326 aa16.84■□□□□ 0.29
FN1-208ENST00000426059 SLC22A2O15244 555 aa16.84■□□□□ 0.29
FN1-208ENST00000426059 VPS4BO75351 444 aa16.84■□□□□ 0.29
FN1-208ENST00000426059 WFS1O76024 890 aa16.84■□□□□ 0.29
FN1-208ENST00000426059 SLC35G4P0C7Q5 338 aa16.84■□□□□ 0.29
FN1-208ENST00000426059 VARSP26640 1264 aaKnown RBP16.84■□□□□ 0.29
FN1-208ENST00000426059 MAPK9P45984 424 aa16.84■□□□□ 0.29
FN1-208ENST00000426059 YBX1P67809 324 aaKnown RBP16.84■□□□□ 0.29
FN1-208ENST00000426059 RPA4Q13156 261 aa16.84■□□□□ 0.29
FN1-208ENST00000426059 ADNP2Q6IQ32 1131 aa16.84■□□□□ 0.29
FN1-208ENST00000426059 RGL4Q8IZJ4 473 aa16.84■□□□□ 0.29
FN1-208ENST00000426059 TSTD1Q8NFU3 115 aa16.84■□□□□ 0.29
FN1-208ENST00000426059 SELENOMQ8WWX9 145 aa16.84■□□□□ 0.29
FN1-208ENST00000426059 OR1E3Q8WZA6 343 aa16.84■□□□□ 0.29
FN1-208ENST00000426059 NEIL2Q969S2 332 aa16.84■□□□□ 0.29
FN1-208ENST00000426059 GPR174Q9BXC1 333 aa16.84■□□□□ 0.29
FN1-208ENST00000426059 GPR45Q9Y5Y3 372 aa16.84■□□□□ 0.29
FN1-208ENST00000426059 DNMT3AQ9Y6K1 912 aaPredicted RBP16.84■□□□□ 0.29
FN1-208ENST00000426059 OR52A4PA6NMU1 304 aa16.83■□□□□ 0.28
FN1-208ENST00000426059 E7ENX8 843 aa16.83■□□□□ 0.28
FN1-208ENST00000426059 IFRD1O00458 451 aaPredicted RBP16.83■□□□□ 0.28
FN1-208ENST00000426059 FBP2O00757 339 aa16.83■□□□□ 0.28
FN1-208ENST00000426059 IGHV4-34P06331 123 aa16.83■□□□□ 0.28
FN1-208ENST00000426059 EZRP15311 586 aaKnown RBP16.83■□□□□ 0.28
FN1-208ENST00000426059 ERVK-8P63133 956 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms