RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 FN3KRPQ9HA64 309 aa3.61□□□□□ -1.83
SF3B1-205ENST00000424674 NUDT15Q9NV35 164 aa3.61□□□□□ -1.83
SF3B1-205ENST00000424674 MTMR4Q9NYA4 1195 aa3.61□□□□□ -1.83
SF3B1-205ENST00000424674 CHMP5Q9NZZ3 219 aa3.61□□□□□ -1.83
SF3B1-205ENST00000424674 RNF181Q9P0P0 153 aa3.61□□□□□ -1.83
SF3B1-205ENST00000424674 MGAT4CQ9UBM8 478 aa3.61□□□□□ -1.83
SF3B1-205ENST00000424674 NKX1-2Q9UD57 310 aaPredicted RBP3.61□□□□□ -1.83
SF3B1-205ENST00000424674 DNAJB4Q9UDY4 337 aa3.61□□□□□ -1.83
SF3B1-205ENST00000424674 HACL1Q9UJ83 578 aa3.61□□□□□ -1.83
SF3B1-205ENST00000424674 NDRG4Q9ULP0 352 aaKnown RBP3.61□□□□□ -1.83
SF3B1-205ENST00000424674 KANK1Q14678 1352 aa3.61□□□□□ -1.83
SF3B1-205ENST00000424674 COL11A2P13942 1736 aaPredicted RBP3.61□□□□□ -1.83
SF3B1-205ENST00000424674 TRAV6A0A075B6T7 132 aa3.6□□□□□ -1.83
SF3B1-205ENST00000424674 A0A0B4J293 547 aa3.6□□□□□ -1.83
SF3B1-205ENST00000424674 TTC26A0AVF1 554 aa3.6□□□□□ -1.83
SF3B1-205ENST00000424674 HELTA6NFD8 242 aa3.6□□□□□ -1.83
SF3B1-205ENST00000424674 OR6C65A6NJZ3 312 aa3.6□□□□□ -1.83
SF3B1-205ENST00000424674 OR52A4PA6NMU1 304 aa3.6□□□□□ -1.83
SF3B1-205ENST00000424674 H3BMM5 538 aa3.6□□□□□ -1.83
SF3B1-205ENST00000424674 M0QZQ0 153 aa3.6□□□□□ -1.83
SF3B1-205ENST00000424674 CLDN4O14493 209 aa3.6□□□□□ -1.83
SF3B1-205ENST00000424674 ALOX15BO15296 676 aa3.6□□□□□ -1.83
SF3B1-205ENST00000424674 KRT86O43790 486 aa3.6□□□□□ -1.83
SF3B1-205ENST00000424674 CSDE1O75534 798 aaKnown RBP3.6□□□□□ -1.83
SF3B1-205ENST00000424674 OR6A2O95222 327 aa3.6□□□□□ -1.83
SF3B1-205ENST00000424674 MBD3O95983 291 aa3.6□□□□□ -1.83
SF3B1-205ENST00000424674 ADAP00813 363 aa3.6□□□□□ -1.83
SF3B1-205ENST00000424674 ELANEP08246 267 aa3.6□□□□□ -1.83
SF3B1-205ENST00000424674 EGR2P11161 476 aaPredicted RBP3.6□□□□□ -1.83
SF3B1-205ENST00000424674 ITGAMP11215 1152 aa3.6□□□□□ -1.83
SF3B1-205ENST00000424674 IL7RP16871 459 aa3.6□□□□□ -1.83
SF3B1-205ENST00000424674 PRKACAP17612 351 aa3.6□□□□□ -1.83
SF3B1-205ENST00000424674 IGFBP2P18065 325 aa3.6□□□□□ -1.83
SF3B1-205ENST00000424674 ANXA7P20073 488 aaKnown RBP3.6□□□□□ -1.83
SF3B1-205ENST00000424674 PRPH2P23942 346 aa3.6□□□□□ -1.83
SF3B1-205ENST00000424674 GSTM2P28161 218 aa3.6□□□□□ -1.83
SF3B1-205ENST00000424674 SLC11A1P49279 550 aa3.6□□□□□ -1.83
SF3B1-205ENST00000424674 ZNF134P52741 427 aa3.6□□□□□ -1.83
SF3B1-205ENST00000424674 GPC5P78333 572 aa3.6□□□□□ -1.83
SF3B1-205ENST00000424674 PDE1BQ01064 536 aa3.6□□□□□ -1.83
SF3B1-205ENST00000424674 ARHGAP1Q07960 439 aa3.6□□□□□ -1.83
SF3B1-205ENST00000424674 FOXI1Q12951 378 aa3.6□□□□□ -1.83
SF3B1-205ENST00000424674 MTX1Q13505 466 aa3.6□□□□□ -1.83
SF3B1-205ENST00000424674 KRT33BQ14525 404 aa3.6□□□□□ -1.83
SF3B1-205ENST00000424674 NCF4Q15080 339 aa3.6□□□□□ -1.83
SF3B1-205ENST00000424674 RPE65Q16518 533 aa3.6□□□□□ -1.83
SF3B1-205ENST00000424674 AANATQ16613 207 aa3.6□□□□□ -1.83
SF3B1-205ENST00000424674 KRT24Q2M2I5 525 aa3.6□□□□□ -1.83
SF3B1-205ENST00000424674 KIF19Q2TAC6 998 aa3.6□□□□□ -1.83
SF3B1-205ENST00000424674 USP41Q3LFD5 358 aa3.6□□□□□ -1.83
SF3B1-205ENST00000424674 FAM174BQ3ZCQ3 159 aa3.6□□□□□ -1.83
SF3B1-205ENST00000424674 SPDYE7PQ495Y7 208 aa3.6□□□□□ -1.83
SF3B1-205ENST00000424674 AASDHQ4L235 1098 aaPredicted RBP3.6□□□□□ -1.83
SF3B1-205ENST00000424674 GPAT3Q53EU6 434 aa3.6□□□□□ -1.83
SF3B1-205ENST00000424674 MPPE1Q53F39 396 aa3.6□□□□□ -1.83
SF3B1-205ENST00000424674 PLEKHO1Q53GL0 409 aaPredicted RBP3.6□□□□□ -1.83
SF3B1-205ENST00000424674 SGO1Q5FBB7 561 aa3.6□□□□□ -1.83
SF3B1-205ENST00000424674 LRRC73Q5JTD7 316 aa3.6□□□□□ -1.83
SF3B1-205ENST00000424674 SPANXN2Q5MJ10 180 aa3.6□□□□□ -1.83
SF3B1-205ENST00000424674 PIP5KL1Q5T9C9 394 aa3.6□□□□□ -1.83
SF3B1-205ENST00000424674 AADACL2Q6P093 401 aa3.6□□□□□ -1.83
SF3B1-205ENST00000424674 ACSM6Q6P461 480 aa3.6□□□□□ -1.83
SF3B1-205ENST00000424674 SYCE2Q6PIF2 218 aa3.6□□□□□ -1.83
SF3B1-205ENST00000424674 ENPP7Q6UWV6 458 aa3.6□□□□□ -1.83
SF3B1-205ENST00000424674 C16orf89Q6UX73 402 aa3.6□□□□□ -1.83
SF3B1-205ENST00000424674 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP3.6□□□□□ -1.83
SF3B1-205ENST00000424674 RD3Q7Z3Z2 195 aa3.6□□□□□ -1.83
SF3B1-205ENST00000424674 MRPL10Q7Z7H8 261 aaKnown RBP3.6□□□□□ -1.83
SF3B1-205ENST00000424674 GPR180Q86V85 440 aa3.6□□□□□ -1.83
SF3B1-205ENST00000424674 MAPKAPK5Q8IW41 473 aa3.6□□□□□ -1.83
SF3B1-205ENST00000424674 CCDC60Q8IWA6 550 aaPredicted RBP3.6□□□□□ -1.83
SF3B1-205ENST00000424674 UBE2J2Q8N2K1 259 aa3.6□□□□□ -1.83
SF3B1-205ENST00000424674 GPR137CQ8N3F9 429 aa3.6□□□□□ -1.83
SF3B1-205ENST00000424674 SLC44A3Q8N4M1 653 aa3.6□□□□□ -1.83
SF3B1-205ENST00000424674 CSGALNACT2Q8N6G5 542 aa3.6□□□□□ -1.83
SF3B1-205ENST00000424674 TRPV1Q8NER1 839 aa3.6□□□□□ -1.83
SF3B1-205ENST00000424674 CMASQ8NFW8 434 aaPredicted RBP3.6□□□□□ -1.83
SF3B1-205ENST00000424674 OR8J1Q8NGP2 316 aa3.6□□□□□ -1.83
SF3B1-205ENST00000424674 EXD1Q8NHP7 514 aa3.6□□□□□ -1.83
SF3B1-205ENST00000424674 FAM110DQ8TAY7 271 aaPredicted RBP3.6□□□□□ -1.83
SF3B1-205ENST00000424674 CAGE1Q8TC20 777 aa3.6□□□□□ -1.83
SF3B1-205ENST00000424674 SLC2A14Q8TDB8 520 aa3.6□□□□□ -1.83
SF3B1-205ENST00000424674 DQX1Q8TE96 717 aaKnown RBP3.6□□□□□ -1.83
SF3B1-205ENST00000424674 MITD1Q8WV92 249 aa3.6□□□□□ -1.83
SF3B1-205ENST00000424674 TMEM171Q8WVE6 324 aa3.6□□□□□ -1.83
SF3B1-205ENST00000424674 ANKRD7Q92527 254 aa3.6□□□□□ -1.83
SF3B1-205ENST00000424674 NSMAFQ92636 917 aa3.6□□□□□ -1.83
SF3B1-205ENST00000424674 RIT1Q92963 219 aa3.6□□□□□ -1.83
SF3B1-205ENST00000424674 RFKQ969G6 155 aa3.6□□□□□ -1.83
SF3B1-205ENST00000424674 MCUR1Q96AQ8 359 aa3.6□□□□□ -1.83
SF3B1-205ENST00000424674 SGK3Q96BR1 496 aa3.6□□□□□ -1.83
SF3B1-205ENST00000424674 RHBDF1Q96CC6 855 aa3.6□□□□□ -1.83
SF3B1-205ENST00000424674 NXNL1Q96CM4 212 aa3.6□□□□□ -1.83
SF3B1-205ENST00000424674 CDKN2AIPNLQ96HQ2 116 aa3.6□□□□□ -1.83
SF3B1-205ENST00000424674 SENP8Q96LD8 212 aa3.6□□□□□ -1.83
SF3B1-205ENST00000424674 HAPLN3Q96S86 360 aa3.6□□□□□ -1.83
SF3B1-205ENST00000424674 C11orf70Q9BRQ4 267 aa3.6□□□□□ -1.83
SF3B1-205ENST00000424674 NMNAT2Q9BZQ4 307 aa3.6□□□□□ -1.83
SF3B1-205ENST00000424674 AZI2Q9H6S1 392 aa3.6□□□□□ -1.83
SF3B1-205ENST00000424674 PSTPIP2Q9H939 334 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms