RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 IL1RAPL1Q9NZN1 696 aa6.02□□□□□ -1.45
SDCBP-203ENST00000424270 DNAJC12Q9UKB3 198 aa6.02□□□□□ -1.45
SDCBP-203ENST00000424270 ACSL5Q9ULC5 683 aa6.02□□□□□ -1.45
SDCBP-203ENST00000424270 NUP210LQ5VU65 1888 aa6.02□□□□□ -1.45
SDCBP-203ENST00000424270 AKAP6Q13023 2319 aa6.02□□□□□ -1.45
SDCBP-203ENST00000424270 CNTRLQ7Z7A1 2325 aa6.02□□□□□ -1.45
SDCBP-203ENST00000424270 HCFC1P51610 2035 aa6.01□□□□□ -1.45
SDCBP-203ENST00000424270 PCM1Q15154 2024 aa6.01□□□□□ -1.45
SDCBP-203ENST00000424270 IGHV1-45A0A0A0MS14 117 aa6.01□□□□□ -1.45
SDCBP-203ENST00000424270 ASPDHA6ND91 283 aa6.01□□□□□ -1.45
SDCBP-203ENST00000424270 FIGNL2A6NMB9 653 aa6.01□□□□□ -1.45
SDCBP-203ENST00000424270 CLCA1A8K7I4 914 aa6.01□□□□□ -1.45
SDCBP-203ENST00000424270 ISM1B1AKI9 464 aa6.01□□□□□ -1.45
SDCBP-203ENST00000424270 NPIPA2E9PIF3 369 aa6.01□□□□□ -1.45
SDCBP-203ENST00000424270 NPIPA3F8WFD2 350 aa6.01□□□□□ -1.45
SDCBP-203ENST00000424270 FOXN3O00409 490 aaPredicted RBP6.01□□□□□ -1.45
SDCBP-203ENST00000424270 HCRTR1O43613 425 aa6.01□□□□□ -1.45
SDCBP-203ENST00000424270 FZD6O60353 706 aa6.01□□□□□ -1.45
SDCBP-203ENST00000424270 GNA14O95837 355 aa6.01□□□□□ -1.45
SDCBP-203ENST00000424270 SP1P08047 785 aa6.01□□□□□ -1.45
SDCBP-203ENST00000424270 ZGLP1P0C6A0 271 aa6.01□□□□□ -1.45
SDCBP-203ENST00000424270 PIRTP0C851 137 aa6.01□□□□□ -1.45
SDCBP-203ENST00000424270 MSH3P20585 1137 aa6.01□□□□□ -1.45
SDCBP-203ENST00000424270 FBLP22087 321 aaKnown RBP6.01□□□□□ -1.45
SDCBP-203ENST00000424270 CD96P40200 585 aa6.01□□□□□ -1.45
SDCBP-203ENST00000424270 RFC3P40938 356 aa6.01□□□□□ -1.45
SDCBP-203ENST00000424270 CDH6P55285 790 aa6.01□□□□□ -1.45
SDCBP-203ENST00000424270 RPL26P61254 145 aaKnown RBP6.01□□□□□ -1.45
SDCBP-203ENST00000424270 PRKG2Q13237 762 aa6.01□□□□□ -1.45
SDCBP-203ENST00000424270 GRM7Q14831 915 aa6.01□□□□□ -1.45
SDCBP-203ENST00000424270 LONRF2Q1L5Z9 754 aa6.01□□□□□ -1.45
SDCBP-203ENST00000424270 BTBD16Q32M84 506 aa6.01□□□□□ -1.45
SDCBP-203ENST00000424270 KHDC1Q4VXA5 237 aaKnown RBP6.01□□□□□ -1.45
SDCBP-203ENST00000424270 ACER2Q5QJU3 275 aa6.01□□□□□ -1.45
SDCBP-203ENST00000424270 MFSD4BQ5TF39 518 aa6.01□□□□□ -1.45
SDCBP-203ENST00000424270 ZNF658Q5TYW1 1059 aaPredicted RBP6.01□□□□□ -1.45
SDCBP-203ENST00000424270 KAZNQ674X7 775 aa6.01□□□□□ -1.45
SDCBP-203ENST00000424270 SLC25A25Q6KCM7 469 aa6.01□□□□□ -1.45
SDCBP-203ENST00000424270 ARHGAP11AQ6P4F7 1023 aa6.01□□□□□ -1.45
SDCBP-203ENST00000424270 ZNF449Q6P9G9 518 aa6.01□□□□□ -1.45
SDCBP-203ENST00000424270 PAOXQ6QHF9 649 aa6.01□□□□□ -1.45
SDCBP-203ENST00000424270 SARM1Q6SZW1 724 aa6.01□□□□□ -1.45
SDCBP-203ENST00000424270 TMCO3Q6UWJ1 677 aa6.01□□□□□ -1.45
SDCBP-203ENST00000424270 B3GNT6Q6ZMB0 384 aa6.01□□□□□ -1.45
SDCBP-203ENST00000424270 COX15Q7KZN9 410 aa6.01□□□□□ -1.45
SDCBP-203ENST00000424270 FGD2Q7Z6J4 655 aa6.01□□□□□ -1.45
SDCBP-203ENST00000424270 SIAH3Q8IW03 269 aa6.01□□□□□ -1.45
SDCBP-203ENST00000424270 ARHGAP12Q8IWW6 846 aa6.01□□□□□ -1.45
SDCBP-203ENST00000424270 LRRC75A-AS1Q8N1F1 130 aa6.01□□□□□ -1.45
SDCBP-203ENST00000424270 OR5M9Q8NGP3 310 aa6.01□□□□□ -1.45
SDCBP-203ENST00000424270 SLC30A5Q8TAD4 765 aa6.01□□□□□ -1.45
SDCBP-203ENST00000424270 CENPIQ92674 756 aaPredicted RBP6.01□□□□□ -1.45
SDCBP-203ENST00000424270 CCL19Q99731 98 aa6.01□□□□□ -1.45
SDCBP-203ENST00000424270 TDRD1Q9BXT4 1180 aaKnown RBP6.01□□□□□ -1.45
SDCBP-203ENST00000424270 SLC26A1Q9H2B4 701 aa6.01□□□□□ -1.45
SDCBP-203ENST00000424270 PLEKHF2Q9H8W4 249 aa6.01□□□□□ -1.45
SDCBP-203ENST00000424270 ZNF304Q9HCX3 659 aa6.01□□□□□ -1.45
SDCBP-203ENST00000424270 ALKBH4Q9NXW9 302 aa6.01□□□□□ -1.45
SDCBP-203ENST00000424270 EURLQ9NYK6 297 aa6.01□□□□□ -1.45
SDCBP-203ENST00000424270 PCSK1NQ9UHG2 260 aa6.01□□□□□ -1.45
SDCBP-203ENST00000424270 CDC42EP3Q9UKI2 254 aa6.01□□□□□ -1.45
SDCBP-203ENST00000424270 CFAP45Q9UL16 551 aa6.01□□□□□ -1.45
SDCBP-203ENST00000424270 MKL2Q9ULH7 1088 aa6.01□□□□□ -1.45
SDCBP-203ENST00000424270 RPL26L1Q9UNX3 145 aaKnown RBP6.01□□□□□ -1.45
SDCBP-203ENST00000424270 INTS1Q8N201 2190 aaKnown RBP6.01□□□□□ -1.45
SDCBP-203ENST00000424270 CHD3Q12873 2000 aaKnown RBP6□□□□□ -1.45
SDCBP-203ENST00000424270 A0A0J9YY10 115 aa6□□□□□ -1.45
SDCBP-203ENST00000424270 GABRR3A8MPY1 467 aa6□□□□□ -1.45
SDCBP-203ENST00000424270 FAM47E-STBD1D6RA91 191 aa6□□□□□ -1.45
SDCBP-203ENST00000424270 HS6ST1O60243 411 aa6□□□□□ -1.45
SDCBP-203ENST00000424270 SLC25A12O75746 678 aa6□□□□□ -1.45
SDCBP-203ENST00000424270 SMC2O95347 1197 aa6□□□□□ -1.45
SDCBP-203ENST00000424270 MMEP08473 750 aa6□□□□□ -1.45
SDCBP-203ENST00000424270 UGT2B7P16662 529 aa6□□□□□ -1.45
SDCBP-203ENST00000424270 ACVR2AP27037 513 aa6□□□□□ -1.45
SDCBP-203ENST00000424270 CDH5P33151 784 aaPredicted RBP6□□□□□ -1.45
SDCBP-203ENST00000424270 ARL4AP40617 200 aa6□□□□□ -1.45
SDCBP-203ENST00000424270 NSFP46459 744 aaKnown RBP6□□□□□ -1.45
SDCBP-203ENST00000424270 DCDC1P59894 354 aa6□□□□□ -1.45
SDCBP-203ENST00000424270 AP1B1Q10567 949 aa6□□□□□ -1.45
SDCBP-203ENST00000424270 LAPTM4AQ15012 233 aa6□□□□□ -1.45
SDCBP-203ENST00000424270 DAZAP2Q15038 168 aaPredicted RBP6□□□□□ -1.45
SDCBP-203ENST00000424270 ZIC1Q15915 447 aa6□□□□□ -1.45
SDCBP-203ENST00000424270 MEP1AQ16819 746 aa6□□□□□ -1.45
SDCBP-203ENST00000424270 EXOC3L4Q17RC7 722 aa6□□□□□ -1.45
SDCBP-203ENST00000424270 FAM214AQ32MH5 1076 aa6□□□□□ -1.45
SDCBP-203ENST00000424270 ATP13A5Q4VNC0 1218 aa6□□□□□ -1.45
SDCBP-203ENST00000424270 CCDC38Q502W7 563 aa6□□□□□ -1.45
SDCBP-203ENST00000424270 METRNLQ641Q3 311 aa6□□□□□ -1.45
SDCBP-203ENST00000424270 HEPHL1Q6MZM0 1159 aa6□□□□□ -1.45
SDCBP-203ENST00000424270 CCDC70Q6NSX1 233 aa6□□□□□ -1.45
SDCBP-203ENST00000424270 DNAJC24Q6P3W2 148 aa6□□□□□ -1.45
SDCBP-203ENST00000424270 DCUN1D2Q6PH85 259 aa6□□□□□ -1.45
SDCBP-203ENST00000424270 WDR59Q6PJI9 974 aa6□□□□□ -1.45
SDCBP-203ENST00000424270 PRSS57Q6UWY2 283 aa6□□□□□ -1.45
SDCBP-203ENST00000424270 CXorf67Q86X51 503 aaPredicted RBP6□□□□□ -1.45
SDCBP-203ENST00000424270 HIPK1Q86Z02 1210 aa6□□□□□ -1.45
SDCBP-203ENST00000424270 TMTC1Q8IUR5 882 aa6□□□□□ -1.45
SDCBP-203ENST00000424270 CFAP206Q8IYR0 622 aa6□□□□□ -1.45
SDCBP-203ENST00000424270 RASGEF1AQ8N9B8 481 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms